RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 RNF182Q8N6D2 247 aa7.27□□□□□ -1.25
CCDC171-203ENST00000449575 PRELID3AQ96N28 172 aa7.27□□□□□ -1.25
CCDC171-203ENST00000449575 OTORQ9NRC9 128 aa7.27□□□□□ -1.25
CCDC171-203ENST00000449575 TRAV8-2A0A0B4J237 113 aa7.27□□□□□ -1.25
CCDC171-203ENST00000449575 H3BMG7 143 aa7.27□□□□□ -1.25
CCDC171-203ENST00000449575 Q9H3A6 140 aa7.27□□□□□ -1.25
CCDC171-203ENST00000449575 TRBV7-9A0A0J9YWB2 115 aa7.26□□□□□ -1.25
CCDC171-203ENST00000449575 A0A1B0GWB2 263 aa7.26□□□□□ -1.25
CCDC171-203ENST00000449575 RBMY1BA6NDE4 496 aaKnown RBP7.26□□□□□ -1.25
CCDC171-203ENST00000449575 RBMY1EA6NEQ0 496 aaKnown RBP7.26□□□□□ -1.25
CCDC171-203ENST00000449575 RBMY1DP0C7P1 496 aaKnown RBP7.26□□□□□ -1.25
CCDC171-203ENST00000449575 RPL7P18124 248 aaKnown RBP7.26□□□□□ -1.25
CCDC171-203ENST00000449575 FOXI1Q12951 378 aa7.26□□□□□ -1.25
CCDC171-203ENST00000449575 C1QTNF4Q9BXJ3 329 aa7.26□□□□□ -1.25
CCDC171-203ENST00000449575 LOC389332A0A1B0GUA5 103 aa7.26□□□□□ -1.25
CCDC171-203ENST00000449575 F6UB75 175 aa7.26□□□□□ -1.25
CCDC171-203ENST00000449575 K7ERJ3 54 aa7.26□□□□□ -1.25
CCDC171-203ENST00000449575 EVI2AP22794 236 aa7.26□□□□□ -1.25
CCDC171-203ENST00000449575 GAGE5Q13069 117 aa7.26□□□□□ -1.25
CCDC171-203ENST00000449575 GAGE6Q13070 117 aa7.26□□□□□ -1.25
CCDC171-203ENST00000449575 TRBV25-1A0A075B6N4 114 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 KNCNA6PVL3 124 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 D6R8Y8 96 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 RRN3P1Q2M238 152 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 C12orf74Q32Q52 190 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 ZMAT4Q9H898 229 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 PRO0461Q9UI25 63 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 TRAV2A0A0B4J234 112 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 TCTAP57738 103 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 FAM104BQ5XKR9 115 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 PRNTQ86SH4 94 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 SYT8Q8NBV8 401 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 C16orf92Q96LL3 132 aa7.25□□□□□ -1.25
CCDC171-203ENST00000449575 ATP5LO75964 103 aa7.24□□□□□ -1.25
CCDC171-203ENST00000449575 IGKCP01834 107 aa7.24□□□□□ -1.25
CCDC171-203ENST00000449575 C18orf15Q96N68 181 aa7.24□□□□□ -1.25
CCDC171-203ENST00000449575 PSG8Q9UQ74 426 aa7.24□□□□□ -1.25
CCDC171-203ENST00000449575 RPL35AP18077 110 aaKnown RBP7.24□□□□□ -1.25
CCDC171-203ENST00000449575 TWIST1Q15672 202 aa7.24□□□□□ -1.25
CCDC171-203ENST00000449575 SBSPONQ8IVN8 264 aa7.24□□□□□ -1.25
CCDC171-203ENST00000449575 ANAPC13Q9BS18 74 aa7.24□□□□□ -1.25
CCDC171-203ENST00000449575 DKK2Q9UBU2 259 aa7.24□□□□□ -1.25
CCDC171-203ENST00000449575 Q6ZUT4 128 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 TMEM75Q8N9X5 138 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 C20orf78Q9BR46 151 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 CDIP1Q9H305 208 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 SPANXA1Q9NS26 97 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 TMEM14CQ9P0S9 112 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 TRBV19A0A075B6N1 114 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 DPM2O94777 84 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 EXOC3-AS1Q8N2X6 119 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 RNF183Q96D59 192 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 HHLA3Q9XRX5 114 aa7.23□□□□□ -1.25
CCDC171-203ENST00000449575 PRAC2D3DTV9 90 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 M0R3E3 92 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 SNRPD3P62318 126 aaKnown RBP7.22□□□□□ -1.25
CCDC171-203ENST00000449575 MRPL23Q16540 153 aaKnown RBP7.22□□□□□ -1.25
CCDC171-203ENST00000449575 LYRM7Q5U5X0 104 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 IGKV2D-26A0A0A0MRZ7 120 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 LINC01546A6NGU7 62 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 A8MZ25 164 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 TMEM262E9PQX1 116 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 IGKV3-20P01619 116 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 IGLV2-11P01706 119 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 CKS2P33552 79 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 TIRAPP58753 221 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 C5orf47Q569G3 176 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 GOLT1AQ6ZVE7 132 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
CCDC171-203ENST00000449575 PRSS1P07477 247 aa7.21□□□□□ -1.25
CCDC171-203ENST00000449575 FCER1GP30273 86 aa7.21□□□□□ -1.25
CCDC171-203ENST00000449575 ZFAND6Q6FIF0 208 aa7.21□□□□□ -1.25
CCDC171-203ENST00000449575 PPDPFLQ8WWR9 84 aa7.21□□□□□ -1.25
CCDC171-203ENST00000449575 HIST1H4GQ99525 98 aa7.21□□□□□ -1.25
CCDC171-203ENST00000449575 SS18L2Q9UHA2 77 aa7.21□□□□□ -1.25
CCDC171-203ENST00000449575 STAB2Q8WWQ8 2551 aa7.21□□□□□ -1.26
CCDC171-203ENST00000449575 MRPL51Q4U2R6 128 aaKnown RBP7.21□□□□□ -1.26
CCDC171-203ENST00000449575 CFAP126Q5VTH2 177 aa7.21□□□□□ -1.26
CCDC171-203ENST00000449575 AMTNQ6UX39 209 aa7.21□□□□□ -1.26
CCDC171-203ENST00000449575 RETNQ9HD89 108 aa7.21□□□□□ -1.26
CCDC171-203ENST00000449575 NXT2Q9NPJ8 142 aaKnown RBP7.21□□□□□ -1.26
CCDC171-203ENST00000449575 H3BMM0 161 aa7.2□□□□□ -1.26
CCDC171-203ENST00000449575 MT-ATP8P03928 68 aa7.2□□□□□ -1.26
CCDC171-203ENST00000449575 AMN1Q8IY45 258 aa7.2□□□□□ -1.26
CCDC171-203ENST00000449575 LYPD1Q8N2G4 141 aa7.2□□□□□ -1.26
CCDC171-203ENST00000449575 TRAV8-1A0A0A6YYK1 113 aa7.2□□□□□ -1.26
CCDC171-203ENST00000449575 GIG44P09565 113 aaPredicted RBP7.2□□□□□ -1.26
CCDC171-203ENST00000449575 ZC2HC1BQ5TFG8 222 aa7.2□□□□□ -1.26
CCDC171-203ENST00000449575 TRPT1Q86TN4 253 aaKnown RBP7.2□□□□□ -1.26
CCDC171-203ENST00000449575 B9D2Q9BPU9 175 aa7.2□□□□□ -1.26
CCDC171-203ENST00000449575 A0A0J9YX75 114 aa7.19□□□□□ -1.26
CCDC171-203ENST00000449575 FXYD7P58549 80 aa7.19□□□□□ -1.26
CCDC171-203ENST00000449575 LYZL1Q6UWQ5 148 aa7.19□□□□□ -1.26
CCDC171-203ENST00000449575 STHQ8IWL8 128 aa7.19□□□□□ -1.26
CCDC171-203ENST00000449575 SLC50A1Q9BRV3 221 aa7.19□□□□□ -1.26
CCDC171-203ENST00000449575 NPYP01303 97 aa7.19□□□□□ -1.26
CCDC171-203ENST00000449575 LEPP41159 167 aa7.19□□□□□ -1.26
CCDC171-203ENST00000449575 XGP55808 180 aa7.19□□□□□ -1.26
CCDC171-203ENST00000449575 SEC61GP60059 68 aa7.19□□□□□ -1.26
CCDC171-203ENST00000449575 CMC4P56277 68 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms