RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 C10orf99Q6UWK7 81 aa8.44□□□□□ -1.06
RFX3-208ENST00000449234 ZNRF2Q8NHG8 242 aa8.44□□□□□ -1.06
RFX3-208ENST00000449234 C4orf3Q8WVX3 66 aa8.44□□□□□ -1.06
RFX3-208ENST00000449234 AMELXQ99217 191 aa8.44□□□□□ -1.06
RFX3-208ENST00000449234 IGHV3-30P01768 117 aa8.43□□□□□ -1.06
RFX3-208ENST00000449234 IGHV3-30-5P0DP03 117 aa8.43□□□□□ -1.06
RFX3-208ENST00000449234 UBE2D3P61077 147 aa8.43□□□□□ -1.06
RFX3-208ENST00000449234 UBE2D2P62837 147 aa8.43□□□□□ -1.06
RFX3-208ENST00000449234 NDUFA11Q86Y39 141 aa8.43□□□□□ -1.06
RFX3-208ENST00000449234 KLHL30-AS1Q8NEE0 82 aa8.43□□□□□ -1.06
RFX3-208ENST00000449234 SPANXA1Q9NS26 97 aa8.43□□□□□ -1.06
RFX3-208ENST00000449234 PRO0461Q9UI25 63 aa8.43□□□□□ -1.06
RFX3-208ENST00000449234 TNFRSF18Q9Y5U5 241 aa8.43□□□□□ -1.06
RFX3-208ENST00000449234 IGLV4-3A0A075B6K6 122 aa8.42□□□□□ -1.06
RFX3-208ENST00000449234 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.42□□□□□ -1.06
RFX3-208ENST00000449234 H3BMG7 143 aa8.42□□□□□ -1.06
RFX3-208ENST00000449234 IGKV3-20P01619 116 aa8.42□□□□□ -1.06
RFX3-208ENST00000449234 DEFB131AP59861 70 aa8.42□□□□□ -1.06
RFX3-208ENST00000449234 DEFB113Q30KQ7 82 aa8.42□□□□□ -1.06
RFX3-208ENST00000449234 RNF183Q96D59 192 aa8.42□□□□□ -1.06
RFX3-208ENST00000449234 RAX2Q96IS3 184 aa8.42□□□□□ -1.06
RFX3-208ENST00000449234 MRPL16Q9NX20 251 aaKnown RBP8.42□□□□□ -1.06
RFX3-208ENST00000449234 TEX48A0A1B0GUV7 120 aa8.41□□□□□ -1.06
RFX3-208ENST00000449234 M0QXV9 152 aa8.41□□□□□ -1.06
RFX3-208ENST00000449234 RS1O15537 224 aa8.41□□□□□ -1.06
RFX3-208ENST00000449234 ZNF22P17026 224 aaPredicted RBP8.41□□□□□ -1.06
RFX3-208ENST00000449234 MRPS36P82909 103 aaKnown RBP8.41□□□□□ -1.06
RFX3-208ENST00000449234 WFDC2Q14508 124 aa8.41□□□□□ -1.06
RFX3-208ENST00000449234 C10orf126Q8N4M7 172 aa8.41□□□□□ -1.06
RFX3-208ENST00000449234 TIMM21Q9BVV7 248 aa8.41□□□□□ -1.06
RFX3-208ENST00000449234 LAMA5O15230 3695 aa8.41□□□□□ -1.06
RFX3-208ENST00000449234 A0A0B4J2C4 111 aa8.4□□□□□ -1.06
RFX3-208ENST00000449234 TMEM238C9JI98 176 aa8.4□□□□□ -1.06
RFX3-208ENST00000449234 IGHV3-53P01767 116 aa8.4□□□□□ -1.06
RFX3-208ENST00000449234 SMAGPQ0VAQ4 97 aa8.4□□□□□ -1.06
RFX3-208ENST00000449234 DEFB114Q30KQ6 69 aa8.4□□□□□ -1.06
RFX3-208ENST00000449234 SBSPONQ8IVN8 264 aa8.4□□□□□ -1.06
RFX3-208ENST00000449234 DUX3Q96PT4 197 aa8.4□□□□□ -1.06
RFX3-208ENST00000449234 PRO1854Q9UHT4 67 aa8.4□□□□□ -1.06
RFX3-208ENST00000449234 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
RFX3-208ENST00000449234 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
RFX3-208ENST00000449234 TSPAN13O95857 204 aa8.39□□□□□ -1.07
RFX3-208ENST00000449234 CFC1BP0CG36 223 aa8.39□□□□□ -1.07
RFX3-208ENST00000449234 CFC1P0CG37 223 aa8.39□□□□□ -1.07
RFX3-208ENST00000449234 LINC01600Q96MT4 127 aa8.39□□□□□ -1.07
RFX3-208ENST00000449234 SIGMAR1Q99720 223 aa8.39□□□□□ -1.07
RFX3-208ENST00000449234 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.38□□□□□ -1.07
RFX3-208ENST00000449234 CIDEAO60543 219 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 INSP01308 110 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 SLURP1P55000 103 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 TIRAPP58753 221 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 TSPEAR-AS2P59090 65 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 CFAP126Q5VTH2 177 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 DYNLRB2Q8TF09 96 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 NRGNQ92686 78 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 SPATA25Q9BR10 227 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 MAP6D1Q9H9H5 199 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 SELENOKQ9Y6D0 94 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 AGRNO00468 2067 aa8.38□□□□□ -1.07
RFX3-208ENST00000449234 A0A0J9YXV3 536 aa8.37□□□□□ -1.07
RFX3-208ENST00000449234 TIMM17BO60830 172 aa8.37□□□□□ -1.07
RFX3-208ENST00000449234 RBMY1A1P0DJD3 496 aaKnown RBP8.37□□□□□ -1.07
RFX3-208ENST00000449234 RBMY1CP0DJD4 496 aa8.37□□□□□ -1.07
RFX3-208ENST00000449234 RBMY1FQ15415 496 aaKnown RBP8.37□□□□□ -1.07
RFX3-208ENST00000449234 LINC01587Q99440 93 aa8.37□□□□□ -1.07
RFX3-208ENST00000449234 DOPEY1Q5JWR5 2465 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 A0A0J9YXY3 114 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
RFX3-208ENST00000449234 GAGE12HA6NDE8 117 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
RFX3-208ENST00000449234 APOMO95445 188 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
RFX3-208ENST00000449234 CD28P10747 220 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 IFITM1P13164 125 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 EMP1P54849 157 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 C21orf62-AS1Q17RA5 79 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 ETDBQ3ZM63 59 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 TMEM61Q8N0U2 210 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 C11orf72Q8NBR9 251 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 SPANXDQ9BXN6 97 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 YAE1D1Q9NRH1 226 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 SPANXCQ9NY87 97 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
RFX3-208ENST00000449234 LOC107984156A0A0G2JMH3 177 aa8.35□□□□□ -1.07
RFX3-208ENST00000449234 TRBV10-1A0A0K0K1A3 114 aa8.35□□□□□ -1.07
RFX3-208ENST00000449234 IGHV3-33P01772 117 aa8.35□□□□□ -1.07
RFX3-208ENST00000449234 PSMB2P49721 201 aa8.35□□□□□ -1.07
RFX3-208ENST00000449234 ARL17AQ8IVW1 177 aa8.35□□□□□ -1.07
RFX3-208ENST00000449234 CHCHD7Q9BUK0 85 aa8.35□□□□□ -1.07
RFX3-208ENST00000449234 C1QTNF4Q9BXJ3 329 aa8.35□□□□□ -1.07
RFX3-208ENST00000449234 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
RFX3-208ENST00000449234 PRRC2AP48634 2157 aaKnown RBP8.35□□□□□ -1.07
RFX3-208ENST00000449234 AKAP6Q13023 2319 aa8.35□□□□□ -1.07
RFX3-208ENST00000449234 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
RFX3-208ENST00000449234 FOXI1Q12951 378 aa8.34□□□□□ -1.07
RFX3-208ENST00000449234 MUSTN1Q8IVN3 82 aa8.34□□□□□ -1.07
RFX3-208ENST00000449234 TMEM263Q8WUH6 116 aaKnown RBP8.34□□□□□ -1.07
RFX3-208ENST00000449234 PPDPFLQ8WWR9 84 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms