RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 C9orf139Q6ZV77 190 aa7.03□□□□□ -1.28
SYNPO2-204ENST00000448416 VMO1Q7Z5L0 202 aa7.03□□□□□ -1.28
SYNPO2-204ENST00000448416 RHOHQ15669 191 aa7.03□□□□□ -1.28
SYNPO2-204ENST00000448416 MIAQ16674 131 aa7.03□□□□□ -1.28
SYNPO2-204ENST00000448416 TMEM61Q8N0U2 210 aa7.03□□□□□ -1.28
SYNPO2-204ENST00000448416 NDUFA12Q9UI09 145 aa7.03□□□□□ -1.28
SYNPO2-204ENST00000448416 CXCL5P42830 114 aa7.02□□□□□ -1.29
SYNPO2-204ENST00000448416 DCANP1Q8TF63 244 aa7.02□□□□□ -1.29
SYNPO2-204ENST00000448416 IGHV7-81A0A0B4J1V7 117 aa7.02□□□□□ -1.29
SYNPO2-204ENST00000448416 OVOL1O14753 267 aa7.02□□□□□ -1.29
SYNPO2-204ENST00000448416 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
SYNPO2-204ENST00000448416 ATOX1O00244 68 aa7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 C5orf38Q86SI9 138 aa7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 NACAE9PAV3 2078 aa7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 MGAQ8IWI9 3026 aa7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 IGFL2Q6UWQ7 119 aa7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 GPR179Q6PRD1 2367 aa7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 RPL11P62913 178 aaKnown RBP7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 DAZ2Q13117 558 aaKnown RBP7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 NSUN5P1Q3KNT7 163 aa7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 DAZ4Q86SG3 579 aaKnown RBP7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 CCDC140Q96MF4 163 aa7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 DAZ1Q9NQZ3 744 aaKnown RBP7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 DAZ3Q9NR90 486 aaKnown RBP7.01□□□□□ -1.29
SYNPO2-204ENST00000448416 IGLV4-3A0A075B6K6 122 aa7□□□□□ -1.29
SYNPO2-204ENST00000448416 C20orf203Q8NBC4 194 aa7□□□□□ -1.29
SYNPO2-204ENST00000448416 KIR2DL5BQ8NHK3 375 aa7□□□□□ -1.29
SYNPO2-204ENST00000448416 FAM110DQ8TAY7 271 aaPredicted RBP7□□□□□ -1.29
SYNPO2-204ENST00000448416 ITLN2Q8WWU7 325 aaPredicted RBP7□□□□□ -1.29
SYNPO2-204ENST00000448416 PEMTQ9UBM1 199 aa7□□□□□ -1.29
SYNPO2-204ENST00000448416 TRBV6-5A0A0K0K1A5 114 aa7□□□□□ -1.29
SYNPO2-204ENST00000448416 F6UB75 175 aa7□□□□□ -1.29
SYNPO2-204ENST00000448416 NXPH4O95158 308 aa7□□□□□ -1.29
SYNPO2-204ENST00000448416 KLRB1Q12918 225 aa7□□□□□ -1.29
SYNPO2-204ENST00000448416 DPH3Q96FX2 82 aa7□□□□□ -1.29
SYNPO2-204ENST00000448416 IGHV1-58A0A0C4DH39 117 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 DAND5Q8N907 189 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 ARRDC1-AS1Q9H2J1 176 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 NCOR1O75376 2440 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 U3KQE9 123 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 TRBV7-1A0A0A6YYK4 115 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 A8MZ25 164 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 E7EQL1 145 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 F5H768 121 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 M0R1W7 72 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 IGF2-ASQ6U949 168 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 CACNA1HO95180 2353 aa6.99□□□□□ -1.29
SYNPO2-204ENST00000448416 CD28P10747 220 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 BOD1L1Q8NFC6 3051 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 IGKV3-7A0A075B6H7 116 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 TRAV13-1A0A0B4J241 112 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 BAALC-AS2P0C853 105 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 TMEM258P61165 79 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 SDIM1Q6ZPB5 146 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 COX7A2LO14548 114 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 DEFB109BQ30KR1 87 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 G3V318 75 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 ATP6V0E1O15342 81 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 TIRAPP58753 221 aa6.98□□□□□ -1.29
SYNPO2-204ENST00000448416 RS1O15537 224 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 C4orf26Q17RF5 130 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 Q8N6K4 173 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 Q8N9W7 124 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 DSCR8Q96T75 97 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 TECTAO75443 2155 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 M0QY20 66 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 HRCT1Q6UXD1 115 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 LY6G5BQ8NDX9 201 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 RNASE13Q5GAN3 156 aaKnown RBP6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 VSIG2Q96IQ7 327 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 CITED2Q99967 270 aaPredicted RBP6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 MED13LQ71F56 2210 aa6.97□□□□□ -1.29
SYNPO2-204ENST00000448416 INAFM2P0DMQ5 153 aa6.96□□□□□ -1.29
SYNPO2-204ENST00000448416 HIST1H4AP62805 103 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-204ENST00000448416 MRPS36P82909 103 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-204ENST00000448416 RPL18AQ02543 176 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-204ENST00000448416 ODF3BA8MYP8 253 aa6.96□□□□□ -1.3
SYNPO2-204ENST00000448416 FAM19A4Q96LR4 140 aa6.96□□□□□ -1.3
SYNPO2-204ENST00000448416 CIRBPQ14011 172 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-204ENST00000448416 APRG1Q8IVJ8 170 aa6.95□□□□□ -1.3
SYNPO2-204ENST00000448416 ADGRG4Q8IZF6 3080 aa6.95□□□□□ -1.3
SYNPO2-204ENST00000448416 CUL9Q8IWT3 2517 aa6.95□□□□□ -1.3
SYNPO2-204ENST00000448416 B9A039 149 aa6.95□□□□□ -1.3
SYNPO2-204ENST00000448416 SERP2Q8N6R1 65 aa6.95□□□□□ -1.3
SYNPO2-204ENST00000448416 A0A0U1RRA0 63 aa6.94□□□□□ -1.3
SYNPO2-204ENST00000448416 IGKV3D-7A0A0C4DH55 119 aa6.94□□□□□ -1.3
SYNPO2-204ENST00000448416 TIMM17BO60830 172 aa6.94□□□□□ -1.3
SYNPO2-204ENST00000448416 OXTP01178 125 aa6.94□□□□□ -1.3
SYNPO2-204ENST00000448416 RNF152Q8N8N0 203 aa6.94□□□□□ -1.3
SYNPO2-204ENST00000448416 SOCS3O14543 225 aa6.93□□□□□ -1.3
SYNPO2-204ENST00000448416 MINOS1Q5TGZ0 78 aa6.93□□□□□ -1.3
SYNPO2-204ENST00000448416 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
SYNPO2-204ENST00000448416 PYGO1Q9Y3Y4 419 aa6.93□□□□□ -1.3
SYNPO2-204ENST00000448416 IGHV3OR16-10A0A075B7F0 116 aa6.93□□□□□ -1.3
SYNPO2-204ENST00000448416 DNAL4O96015 105 aa6.93□□□□□ -1.3
SYNPO2-204ENST00000448416 Q8N2B8 174 aa6.93□□□□□ -1.3
SYNPO2-204ENST00000448416 LINC00308Q8TCZ7 52 aa6.93□□□□□ -1.3
SYNPO2-204ENST00000448416 LY6HO94772 140 aa6.92□□□□□ -1.3
SYNPO2-204ENST00000448416 ZNF625Q96I27 306 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms