RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PRADC1Q9BSG0 188 aa13.74□□□□□ -0.21
SGCE-207ENST00000447873 TRBV10-1A0A0K0K1A3 114 aa13.72□□□□□ -0.21
SGCE-207ENST00000447873 Q9UF83 564 aa13.72□□□□□ -0.21
SGCE-207ENST00000447873 DEFB131BA0A096LNP1 70 aa13.71□□□□□ -0.21
SGCE-207ENST00000447873 PAX4O43316 350 aa13.71□□□□□ -0.21
SGCE-207ENST00000447873 RAB5BP61020 215 aa13.71□□□□□ -0.21
SGCE-207ENST00000447873 ST20Q9HBF5 79 aa13.71□□□□□ -0.21
SGCE-207ENST00000447873 TNFRSF18Q9Y5U5 241 aa13.71□□□□□ -0.21
SGCE-207ENST00000447873 TRAV26-1A0A087WT03 109 aa13.71□□□□□ -0.22
SGCE-207ENST00000447873 TRAV10A0A0B4J240 114 aa13.71□□□□□ -0.22
SGCE-207ENST00000447873 A0A0J9YY99 117 aa13.71□□□□□ -0.22
SGCE-207ENST00000447873 NEXN-AS1Q8NBZ9 246 aa13.71□□□□□ -0.22
SGCE-207ENST00000447873 DNAJC30Q96LL9 226 aa13.71□□□□□ -0.22
SGCE-207ENST00000447873 MAP1LC3AQ9H492 121 aa13.71□□□□□ -0.22
SGCE-207ENST00000447873 HIST1H2BKO60814 126 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 HIST1H2BJP06899 126 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 HIST1H2BOP23527 126 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 HIST1H2BBP33778 126 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 HIST1H2BDP58876 126 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 SUMO2P61956 95 aaKnown RBP13.7□□□□□ -0.22
SGCE-207ENST00000447873 HIST1H2BCP62807 126 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 RPL36AP83881 106 aaKnown RBP13.7□□□□□ -0.22
SGCE-207ENST00000447873 HIST2H2BEQ16778 126 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.7□□□□□ -0.22
SGCE-207ENST00000447873 C18orf32Q8TCD1 76 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 HIST1H2BHQ93079 126 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 RPL36ALQ969Q0 106 aaKnown RBP13.7□□□□□ -0.22
SGCE-207ENST00000447873 HIST1H2BNQ99877 126 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 HIST1H2BMQ99879 126 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 C20orf78Q9BR46 151 aa13.7□□□□□ -0.22
SGCE-207ENST00000447873 TRBV7-3A0A075B6L6 115 aa13.69□□□□□ -0.22
SGCE-207ENST00000447873 TRBV6-5A0A0K0K1A5 114 aa13.69□□□□□ -0.22
SGCE-207ENST00000447873 LOC100131303A0A0U1RQF7 123 aa13.69□□□□□ -0.22
SGCE-207ENST00000447873 LOC389332A0A1B0GUA5 103 aa13.69□□□□□ -0.22
SGCE-207ENST00000447873 ZNRF2Q8NHG8 242 aa13.69□□□□□ -0.22
SGCE-207ENST00000447873 VSIG2Q96IQ7 327 aa13.69□□□□□ -0.22
SGCE-207ENST00000447873 GAGE12JA6NER3 117 aa13.68□□□□□ -0.22
SGCE-207ENST00000447873 GYPEP15421 78 aa13.68□□□□□ -0.22
SGCE-207ENST00000447873 GAGE1Q13065 139 aa13.68□□□□□ -0.22
SGCE-207ENST00000447873 GAGE4Q13068 117 aa13.68□□□□□ -0.22
SGCE-207ENST00000447873 GAGE5Q13069 117 aa13.68□□□□□ -0.22
SGCE-207ENST00000447873 IQCJQ1A5X6 159 aa13.68□□□□□ -0.22
SGCE-207ENST00000447873 GAGE13Q4V321 117 aa13.68□□□□□ -0.22
SGCE-207ENST00000447873 SDHAF1A6NFY7 115 aa13.67□□□□□ -0.22
SGCE-207ENST00000447873 TGP01266 2768 aa13.67□□□□□ -0.22
SGCE-207ENST00000447873 PHLDA1Q8WV24 401 aaPredicted RBP13.66□□□□□ -0.22
SGCE-207ENST00000447873 TMEM70Q9BUB7 260 aa13.66□□□□□ -0.22
SGCE-207ENST00000447873 Q0VG73 95 aa13.66□□□□□ -0.22
SGCE-207ENST00000447873 BAGE3Q86Y29 109 aa13.66□□□□□ -0.22
SGCE-207ENST00000447873 PRSS3P2Q8NHM4 247 aa13.66□□□□□ -0.22
SGCE-207ENST00000447873 PRSS47A8MTI9 375 aa13.65□□□□□ -0.22
SGCE-207ENST00000447873 PMCHP20382 165 aa13.65□□□□□ -0.22
SGCE-207ENST00000447873 IFI27P40305 119 aaPredicted RBP13.65□□□□□ -0.22
SGCE-207ENST00000447873 POLR2KP53803 58 aaKnown RBP13.65□□□□□ -0.22
SGCE-207ENST00000447873 SMIM2Q9BVW6 85 aa13.65□□□□□ -0.22
SGCE-207ENST00000447873 VCYO14598 125 aa13.64□□□□□ -0.23
SGCE-207ENST00000447873 UBE2D3P61077 147 aa13.64□□□□□ -0.23
SGCE-207ENST00000447873 UBE2D2P62837 147 aa13.64□□□□□ -0.23
SGCE-207ENST00000447873 H3BNG1 76 aa13.63□□□□□ -0.23
SGCE-207ENST00000447873 RPL32P62910 135 aaKnown RBP13.63□□□□□ -0.23
SGCE-207ENST00000447873 NEGR1Q7Z3B1 354 aa13.63□□□□□ -0.23
SGCE-207ENST00000447873 Q8N8P6 123 aa13.63□□□□□ -0.23
SGCE-207ENST00000447873 NXT2Q9NPJ8 142 aaKnown RBP13.63□□□□□ -0.23
SGCE-207ENST00000447873 TRBV27A0A0K0K1C4 114 aa13.62□□□□□ -0.23
SGCE-207ENST00000447873 I3L3M4 83 aa13.62□□□□□ -0.23
SGCE-207ENST00000447873 MRPL23Q16540 153 aaKnown RBP13.62□□□□□ -0.23
SGCE-207ENST00000447873 DAZ4Q86SG3 579 aaKnown RBP13.62□□□□□ -0.23
SGCE-207ENST00000447873 DAZ3Q9NR90 486 aaKnown RBP13.62□□□□□ -0.23
SGCE-207ENST00000447873 TMA7Q9Y2S6 64 aaKnown RBP13.62□□□□□ -0.23
SGCE-207ENST00000447873 ICOSQ9Y6W8 199 aa13.62□□□□□ -0.23
SGCE-207ENST00000447873 IGHV3-38A0A0C4DH36 116 aa13.62□□□□□ -0.23
SGCE-207ENST00000447873 LINC00694P0DN24 101 aa13.62□□□□□ -0.23
SGCE-207ENST00000447873 NDUFA6P56556 154 aa13.62□□□□□ -0.23
SGCE-207ENST00000447873 FA2HQ7L5A8 372 aa13.62□□□□□ -0.23
SGCE-207ENST00000447873 NIT1Q86X76 327 aa13.62□□□□□ -0.23
SGCE-207ENST00000447873 KIR2DL4Q99706 377 aa13.62□□□□□ -0.23
SGCE-207ENST00000447873 IGLV2-18A0A075B6J9 118 aa13.61□□□□□ -0.23
SGCE-207ENST00000447873 A0A096LPF7 62 aa13.6□□□□□ -0.23
SGCE-207ENST00000447873 LINC00614P0C842 121 aa13.6□□□□□ -0.23
SGCE-207ENST00000447873 RNASEKQ6P5S7 137 aaKnown RBP13.6□□□□□ -0.23
SGCE-207ENST00000447873 ATP6V0E2Q8NHE4 81 aa13.6□□□□□ -0.23
SGCE-207ENST00000447873 DEFB104AQ8WTQ1 72 aa13.6□□□□□ -0.23
SGCE-207ENST00000447873 NUDT3O95989 172 aa13.59□□□□□ -0.23
SGCE-207ENST00000447873 S100A6P06703 90 aa13.59□□□□□ -0.23
SGCE-207ENST00000447873 DNAH7Q8WXX0 4024 aa13.59□□□□□ -0.23
SGCE-207ENST00000447873 IGLL5B9A064 214 aa13.58□□□□□ -0.23
SGCE-207ENST00000447873 TCAPO15273 167 aa13.58□□□□□ -0.23
SGCE-207ENST00000447873 FCER1GP30273 86 aa13.58□□□□□ -0.23
SGCE-207ENST00000447873 SH2D6Q7Z4S9 175 aa13.58□□□□□ -0.23
SGCE-207ENST00000447873 URB1-AS1Q96HZ7 61 aa13.58□□□□□ -0.23
SGCE-207ENST00000447873 AP5S1Q9NUS5 200 aa13.58□□□□□ -0.23
SGCE-207ENST00000447873 SERF1AO75920 110 aa13.58□□□□□ -0.24
SGCE-207ENST00000447873 COTL1Q14019 142 aa13.58□□□□□ -0.24
SGCE-207ENST00000447873 K7EMI3 77 aa13.57□□□□□ -0.24
SGCE-207ENST00000447873 TSHBP01222 138 aa13.57□□□□□ -0.24
SGCE-207ENST00000447873 CEMP1Q6PRD7 247 aaPredicted RBP13.57□□□□□ -0.24
SGCE-207ENST00000447873 C15orf53Q8NAA6 179 aa13.57□□□□□ -0.24
SGCE-207ENST00000447873 CHCHD1Q96BP2 118 aaKnown RBP13.57□□□□□ -0.24
SGCE-207ENST00000447873 NUPR2A6NF83 97 aa13.56□□□□□ -0.24
SGCE-207ENST00000447873 LAGE3Q14657 143 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms