RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 FLG2Q5D862 2391 aaPredicted RBP6.62□□□□□ -1.35
LINC00642-203ENST00000444942 DNAH5Q8TE73 4624 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 TRAV12-3A0A0B4J271 114 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 IGHV1-24A0A0C4DH33 117 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 C7orf71A4D174 169 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 KLLNB2CW77 178 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 INAFM2P0DMQ5 153 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 TSPOP30536 169 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 RRN3P1Q2M238 152 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 ANXA2RQ3ZCQ2 193 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 OR10AG1Q8NH19 301 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 MSRB1Q9NZV6 116 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 LAMTOR2Q9Y2Q5 125 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 TIMM8BQ9Y5J9 83 aaPredicted RBP6.61□□□□□ -1.35
LINC00642-203ENST00000444942 HMCN2Q8NDA2 5059 aa6.61□□□□□ -1.35
LINC00642-203ENST00000444942 IGHV4-4A0A075B6R2 117 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 LINC00587B1AMM8 73 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 C3orf79P0CE67 100 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 AZU1P20160 251 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 FAM159AQ6UWV7 190 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 TEX43Q6ZNM6 134 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 Q6ZQT7 251 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 PHLDA1Q8WV24 401 aaPredicted RBP6.6□□□□□ -1.35
LINC00642-203ENST00000444942 RNF185Q96GF1 192 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 PRO1933Q9H354 126 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 MAP1LC3AQ9H492 121 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 AP5S1Q9NUS5 200 aa6.6□□□□□ -1.35
LINC00642-203ENST00000444942 SMKR1H3BMG3 65 aa6.59□□□□□ -1.35
LINC00642-203ENST00000444942 LEPROTL1O95214 131 aa6.59□□□□□ -1.35
LINC00642-203ENST00000444942 NCR2O95944 276 aa6.59□□□□□ -1.35
LINC00642-203ENST00000444942 NPYP01303 97 aa6.59□□□□□ -1.35
LINC00642-203ENST00000444942 BTF3P20290 206 aaKnown RBP6.59□□□□□ -1.35
LINC00642-203ENST00000444942 FAM222AQ5U5X8 452 aa6.59□□□□□ -1.35
LINC00642-203ENST00000444942 VAMP8Q9BV40 100 aa6.59□□□□□ -1.35
LINC00642-203ENST00000444942 PHLDA3Q9Y5J5 127 aa6.59□□□□□ -1.35
LINC00642-203ENST00000444942 LOC389332A0A1B0GUA5 103 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 C20orf202A1L168 122 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 SMIM9A6NGZ8 99 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 HTN3P15516 51 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 PMCHL1Q16048 86 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 Q6ZTC4 211 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 ZNF664Q8N3J9 261 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 Q8N976 141 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 C18orf15Q96N68 181 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 TMEM70Q9BUB7 260 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 HSPB8Q9UJY1 196 aa6.58□□□□□ -1.36
LINC00642-203ENST00000444942 M0R381 172 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 SPART-AS1P0CW21 52 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 EVI2AP22794 236 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 DDTP30046 118 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 IFI27P40305 119 aaPredicted RBP6.57□□□□□ -1.36
LINC00642-203ENST00000444942 C12orf74Q32Q52 190 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 MRAP2Q96G30 205 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 AP1S3Q96PC3 154 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 DPH3P1Q9H4G8 78 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 NXT2Q9NPJ8 142 aaKnown RBP6.57□□□□□ -1.36
LINC00642-203ENST00000444942 C16orf90A8MZG2 172 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 IGLL5B9A064 214 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 GNRH2O43555 120 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 TNFRSF6BO95407 300 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 DEFB130BP0DP73 79 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 DEFB130AP0DP74 79 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 RNASE3P12724 160 aaKnown RBP6.57□□□□□ -1.36
LINC00642-203ENST00000444942 TDRG1Q3Y452 100 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 MAP1LC3CQ9BXW4 147 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 DKK2Q9UBU2 259 aa6.57□□□□□ -1.36
LINC00642-203ENST00000444942 TRGV11A0A075B6L2 103 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 IGHV1OR15-1A0A075B7D0 117 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 EPM2AB3EWF7 344 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 NXPH4O95158 308 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 HBDP02042 147 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 MGPP08493 103 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 TCTAP57738 103 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 DAD1P61803 113 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 PET117Q6UWS5 81 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 C20orf144Q9BQM9 153 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 NOP10Q9NPE3 64 aaKnown RBP6.56□□□□□ -1.36
LINC00642-203ENST00000444942 PAM16Q9Y3D7 125 aa6.56□□□□□ -1.36
LINC00642-203ENST00000444942 DEFB131BA0A096LNP1 70 aa6.55□□□□□ -1.36
LINC00642-203ENST00000444942 TRAV10A0A0B4J240 114 aa6.55□□□□□ -1.36
LINC00642-203ENST00000444942 CBY3A6NI87 242 aa6.55□□□□□ -1.36
LINC00642-203ENST00000444942 SYS1-DBNDD2H3BUS1 97 aa6.55□□□□□ -1.36
LINC00642-203ENST00000444942 SMIM17P0DL12 118 aa6.55□□□□□ -1.36
LINC00642-203ENST00000444942 Q8N8P6 123 aa6.55□□□□□ -1.36
LINC00642-203ENST00000444942 SYT8Q8NBV8 401 aa6.55□□□□□ -1.36
LINC00642-203ENST00000444942 C16orf74Q96GX8 76 aa6.55□□□□□ -1.36
LINC00642-203ENST00000444942 TRAV26-2A0A0B4J265 109 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 IGHV3-16A0A0C4DH30 117 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 GAGE12BA1L429 117 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 PLAC8L1A1L4L8 177 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 LINC01546A6NGU7 62 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 PRSS47A8MTI9 375 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 GAGE7O76087 117 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 PPP1R17O96001 155 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 GAGE12FP0CL80 117 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 GAGE12GP0CL81 117 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 GAGE12IP0CL82 117 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 GATA1P15976 413 aaPredicted RBP6.54□□□□□ -1.36
LINC00642-203ENST00000444942 SPATA45Q537H7 98 aa6.54□□□□□ -1.36
LINC00642-203ENST00000444942 LINC00173Q6ZV60 143 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms