RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 SLC25A34Q6PIV7 304 aa13.72□□□□□ -0.21
SEMA3D-202ENST00000444867 C2orf66Q6UXQ4 117 aa13.72□□□□□ -0.21
SEMA3D-202ENST00000444867 SCGB3A1Q96QR1 104 aa13.72□□□□□ -0.21
SEMA3D-202ENST00000444867 DKK2Q9UBU2 259 aa13.72□□□□□ -0.21
SEMA3D-202ENST00000444867 C1QTNF4Q9BXJ3 329 aa13.71□□□□□ -0.22
SEMA3D-202ENST00000444867 RIPPLY3P57055 190 aa13.7□□□□□ -0.22
SEMA3D-202ENST00000444867 ZFP2Q6ZN57 461 aa13.7□□□□□ -0.22
SEMA3D-202ENST00000444867 IL17DQ8TAD2 202 aa13.7□□□□□ -0.22
SEMA3D-202ENST00000444867 CYSLTR1Q9Y271 337 aa13.7□□□□□ -0.22
SEMA3D-202ENST00000444867 A0A087WX48 190 aa13.69□□□□□ -0.22
SEMA3D-202ENST00000444867 DPM2O94777 84 aa13.69□□□□□ -0.22
SEMA3D-202ENST00000444867 PRM2P04554 102 aa13.69□□□□□ -0.22
SEMA3D-202ENST00000444867 COX8AP10176 69 aa13.69□□□□□ -0.22
SEMA3D-202ENST00000444867 ERASQ7Z444 233 aa13.69□□□□□ -0.22
SEMA3D-202ENST00000444867 IGKCP01834 107 aa13.68□□□□□ -0.22
SEMA3D-202ENST00000444867 RHOHQ15669 191 aa13.68□□□□□ -0.22
SEMA3D-202ENST00000444867 CFAP126Q5VTH2 177 aa13.68□□□□□ -0.22
SEMA3D-202ENST00000444867 RS1O15537 224 aa13.68□□□□□ -0.22
SEMA3D-202ENST00000444867 NEGR1Q7Z3B1 354 aa13.68□□□□□ -0.22
SEMA3D-202ENST00000444867 TMEM263Q8WUH6 116 aaKnown RBP13.68□□□□□ -0.22
SEMA3D-202ENST00000444867 NACAE9PAV3 2078 aa13.67□□□□□ -0.22
SEMA3D-202ENST00000444867 AZU1P20160 251 aa13.67□□□□□ -0.22
SEMA3D-202ENST00000444867 ANKRD39Q53RE8 183 aa13.67□□□□□ -0.22
SEMA3D-202ENST00000444867 C9orf66Q5T8R8 295 aa13.67□□□□□ -0.22
SEMA3D-202ENST00000444867 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.67□□□□□ -0.22
SEMA3D-202ENST00000444867 RNASE8Q8TDE3 154 aaKnown RBP13.67□□□□□ -0.22
SEMA3D-202ENST00000444867 I3L3M4 83 aa13.66□□□□□ -0.22
SEMA3D-202ENST00000444867 GIG44P09565 113 aaPredicted RBP13.66□□□□□ -0.22
SEMA3D-202ENST00000444867 CITED1Q99966 193 aa13.66□□□□□ -0.22
SEMA3D-202ENST00000444867 IGHV3OR16-12A0A075B7B8 117 aa13.65□□□□□ -0.22
SEMA3D-202ENST00000444867 PLNP26678 52 aa13.65□□□□□ -0.22
SEMA3D-202ENST00000444867 NEXN-AS1Q8NBZ9 246 aa13.65□□□□□ -0.22
SEMA3D-202ENST00000444867 TMEM141Q96I45 108 aa13.65□□□□□ -0.22
SEMA3D-202ENST00000444867 WFDC10AQ9H1F0 79 aa13.65□□□□□ -0.22
SEMA3D-202ENST00000444867 MRPL16Q9NX20 251 aaKnown RBP13.65□□□□□ -0.22
SEMA3D-202ENST00000444867 F8VRH5 84 aa13.64□□□□□ -0.23
SEMA3D-202ENST00000444867 STPG4Q8N801 248 aa13.64□□□□□ -0.23
SEMA3D-202ENST00000444867 DNAJC30Q96LL9 226 aa13.64□□□□□ -0.23
SEMA3D-202ENST00000444867 MRPL35Q9NZE8 188 aaKnown RBP13.64□□□□□ -0.23
SEMA3D-202ENST00000444867 HHLA3Q9XRX5 114 aa13.64□□□□□ -0.23
SEMA3D-202ENST00000444867 TP53TG1Q9Y2A0 90 aa13.64□□□□□ -0.23
SEMA3D-202ENST00000444867 IGHV3-53P01767 116 aa13.64□□□□□ -0.23
SEMA3D-202ENST00000444867 RPL35AP18077 110 aaKnown RBP13.64□□□□□ -0.23
SEMA3D-202ENST00000444867 BAALCQ8WXS3 180 aa13.64□□□□□ -0.23
SEMA3D-202ENST00000444867 TIMM17AQ99595 171 aa13.64□□□□□ -0.23
SEMA3D-202ENST00000444867 IGHV3-73A0A0B4J1V6 119 aa13.63□□□□□ -0.23
SEMA3D-202ENST00000444867 DLEU1O43261 78 aa13.63□□□□□ -0.23
SEMA3D-202ENST00000444867 TSHBP01222 138 aa13.63□□□□□ -0.23
SEMA3D-202ENST00000444867 GTSCR1Q86UQ5 136 aa13.63□□□□□ -0.23
SEMA3D-202ENST00000444867 C16orf74Q96GX8 76 aa13.63□□□□□ -0.23
SEMA3D-202ENST00000444867 CHTOPQ9Y3Y2 248 aaKnown RBP13.63□□□□□ -0.23
SEMA3D-202ENST00000444867 TNFRSF18Q9Y5U5 241 aa13.63□□□□□ -0.23
SEMA3D-202ENST00000444867 C2CD3Q4AC94 2353 aa13.62□□□□□ -0.23
SEMA3D-202ENST00000444867 IGIPA6NJ69 53 aa13.62□□□□□ -0.23
SEMA3D-202ENST00000444867 CSNK1G2-AS1Q8NCQ2 148 aa13.62□□□□□ -0.23
SEMA3D-202ENST00000444867 JMJD1CQ15652 2540 aa13.61□□□□□ -0.23
SEMA3D-202ENST00000444867 DAZ2Q13117 558 aaKnown RBP13.61□□□□□ -0.23
SEMA3D-202ENST00000444867 BOD1L2Q8IYS8 172 aa13.61□□□□□ -0.23
SEMA3D-202ENST00000444867 FGF6P10767 208 aa13.61□□□□□ -0.23
SEMA3D-202ENST00000444867 TRGV1A0A0A0MS02 117 aa13.6□□□□□ -0.23
SEMA3D-202ENST00000444867 OR4C5Q8NGB2 326 aa13.6□□□□□ -0.23
SEMA3D-202ENST00000444867 BATFQ16520 125 aa13.59□□□□□ -0.23
SEMA3D-202ENST00000444867 COL5A1-AS1Q5SY13 56 aa13.59□□□□□ -0.23
SEMA3D-202ENST00000444867 ZC2HC1BQ5TFG8 222 aa13.59□□□□□ -0.23
SEMA3D-202ENST00000444867 C20orf203Q8NBC4 194 aa13.59□□□□□ -0.23
SEMA3D-202ENST00000444867 TRAV4A0A0B4J268 109 aa13.58□□□□□ -0.24
SEMA3D-202ENST00000444867 A0A1B0GV90 55 aa13.58□□□□□ -0.24
SEMA3D-202ENST00000444867 PRSS29PA6NIE9 313 aa13.58□□□□□ -0.24
SEMA3D-202ENST00000444867 SIVA1O15304 175 aa13.58□□□□□ -0.24
SEMA3D-202ENST00000444867 RPL39P62891 51 aaKnown RBP13.58□□□□□ -0.24
SEMA3D-202ENST00000444867 Q6ZSN1 163 aa13.58□□□□□ -0.24
SEMA3D-202ENST00000444867 P0DMU3 169 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 FAM231AP0DMU4 169 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 FAM231CP0DMU5 169 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 NMUP48645 174 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 PMVKQ15126 192 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 RRN3P1Q2M238 152 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 TP73-AS1Q9UF72 201 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 CIDEAO60543 219 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 PAPPA-AS1Q5QFB9 102 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 C12orf54Q6X4T0 127 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 C2orf91Q6ZV80 131 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 OVOL2Q9BRP0 275 aa13.57□□□□□ -0.24
SEMA3D-202ENST00000444867 PLAC8L1A1L4L8 177 aa13.56□□□□□ -0.24
SEMA3D-202ENST00000444867 HINT1P49773 126 aaPredicted RBP13.56□□□□□ -0.24
SEMA3D-202ENST00000444867 Q6ZTI0 123 aa13.56□□□□□ -0.24
SEMA3D-202ENST00000444867 NOP10Q9NPE3 64 aaKnown RBP13.55□□□□□ -0.24
SEMA3D-202ENST00000444867 TRBV10-1A0A0K0K1A3 114 aa13.54□□□□□ -0.24
SEMA3D-202ENST00000444867 DEFB104AQ8WTQ1 72 aa13.54□□□□□ -0.24
SEMA3D-202ENST00000444867 CST9LQ9H4G1 147 aa13.54□□□□□ -0.24
SEMA3D-202ENST00000444867 NPSP0C0P6 89 aa13.53□□□□□ -0.24
SEMA3D-202ENST00000444867 PRIMA1Q86XR5 153 aa13.53□□□□□ -0.24
SEMA3D-202ENST00000444867 PCP2Q8IVA1 136 aa13.53□□□□□ -0.24
SEMA3D-202ENST00000444867 WFDC9Q8NEX5 89 aa13.53□□□□□ -0.24
SEMA3D-202ENST00000444867 PYGO1Q9Y3Y4 419 aa13.53□□□□□ -0.24
SEMA3D-202ENST00000444867 IGKV2D-26A0A0A0MRZ7 120 aa13.53□□□□□ -0.24
SEMA3D-202ENST00000444867 MPV17L2Q567V2 206 aa13.53□□□□□ -0.24
SEMA3D-202ENST00000444867 TMEM97Q5BJF2 176 aa13.53□□□□□ -0.24
SEMA3D-202ENST00000444867 SPATA3Q8NHX4 192 aa13.53□□□□□ -0.24
SEMA3D-202ENST00000444867 ZNF479Q96JC4 524 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms