RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 IGLV3-1P01715 115 aa12.05□□□□□ -0.48
CDH23-207ENST00000442677 SPANXB1Q9NS25 103 aaPredicted RBP12.05□□□□□ -0.48
CDH23-207ENST00000442677 SPTAN1Q13813 2472 aaKnown RBP12.05□□□□□ -0.48
CDH23-207ENST00000442677 FRMPD3Q5JV73 1810 aa12.05□□□□□ -0.48
CDH23-207ENST00000442677 MDFICQ9P1T7 246 aa12.05□□□□□ -0.48
CDH23-207ENST00000442677 TNCP24821 2201 aa12.05□□□□□ -0.48
CDH23-207ENST00000442677 K7ERS5 55 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 P0DMU3 169 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 FAM231AP0DMU4 169 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 FAM231CP0DMU5 169 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 MED13Q9UHV7 2174 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 IGHV4-30-2A0A087WSY4 118 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 CENPVL3A0A0U1RRI6 287 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 IGKV1-17P01599 117 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 IGHV4-38-2P0DP08 117 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 CTSGP08311 255 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 BLCAPP62952 87 aa12.04□□□□□ -0.48
CDH23-207ENST00000442677 IGLV11-55A0A075B6I3 123 aa12.03□□□□□ -0.48
CDH23-207ENST00000442677 CTRLP40313 264 aa12.03□□□□□ -0.48
CDH23-207ENST00000442677 C11orf53Q8IXP5 236 aa12.03□□□□□ -0.48
CDH23-207ENST00000442677 A0A0J9YXY3 114 aa12.03□□□□□ -0.48
CDH23-207ENST00000442677 A6NED7 52 aa12.03□□□□□ -0.48
CDH23-207ENST00000442677 C9orf66Q5T8R8 295 aa12.02□□□□□ -0.48
CDH23-207ENST00000442677 CXCL5P42830 114 aa12.02□□□□□ -0.48
CDH23-207ENST00000442677 PDE6GP18545 87 aa12.02□□□□□ -0.49
CDH23-207ENST00000442677 CRIPAKQ8N1N5 446 aa12.02□□□□□ -0.49
CDH23-207ENST00000442677 MGAMO43451 1857 aa12.02□□□□□ -0.49
CDH23-207ENST00000442677 PLXNA2O75051 1894 aa12.02□□□□□ -0.49
CDH23-207ENST00000442677 B9D2Q9BPU9 175 aa12.01□□□□□ -0.49
CDH23-207ENST00000442677 SIRPDQ9H106 197 aa12.01□□□□□ -0.49
CDH23-207ENST00000442677 KAAG1Q9UBP8 84 aa12.01□□□□□ -0.49
CDH23-207ENST00000442677 CACNA1GO43497 2377 aa12.01□□□□□ -0.49
CDH23-207ENST00000442677 PCNX1Q96RV3 2341 aa12.01□□□□□ -0.49
CDH23-207ENST00000442677 K7ENP7 123 aa12□□□□□ -0.49
CDH23-207ENST00000442677 PRR4Q16378 134 aa12□□□□□ -0.49
CDH23-207ENST00000442677 C1orf195Q5TG92 126 aa12□□□□□ -0.49
CDH23-207ENST00000442677 IGKV2-24A0A0C4DH68 120 aa12□□□□□ -0.49
CDH23-207ENST00000442677 HIGD2AQ9BW72 106 aa12□□□□□ -0.49
CDH23-207ENST00000442677 PLA2G5P39877 138 aa11.99□□□□□ -0.49
CDH23-207ENST00000442677 C2orf70A6NJV1 201 aa11.99□□□□□ -0.49
CDH23-207ENST00000442677 KIAA1549Q9HCM3 1950 aa11.99□□□□□ -0.49
CDH23-207ENST00000442677 PRR15LQ9BU68 103 aa11.99□□□□□ -0.49
CDH23-207ENST00000442677 CCDC179H3BU77 68 aa11.98□□□□□ -0.49
CDH23-207ENST00000442677 GRNP28799 593 aaKnown RBP11.98□□□□□ -0.49
CDH23-207ENST00000442677 RNF138Q8WVD3 245 aa11.98□□□□□ -0.49
CDH23-207ENST00000442677 DEFB135Q30KP9 77 aa11.98□□□□□ -0.49
CDH23-207ENST00000442677 GVINP1Q7Z2Y8 2422 aa11.98□□□□□ -0.49
CDH23-207ENST00000442677 TIMM17BO60830 172 aa11.98□□□□□ -0.49
CDH23-207ENST00000442677 E7EUB6 86 aa11.97□□□□□ -0.49
CDH23-207ENST00000442677 CNOT1A5YKK6 2376 aaKnown RBP11.97□□□□□ -0.49
CDH23-207ENST00000442677 WT1P19544 449 aaPredicted RBP11.97□□□□□ -0.49
CDH23-207ENST00000442677 FAM215AQ9Y5M1 114 aa11.97□□□□□ -0.49
CDH23-207ENST00000442677 TP53TG3Q9ULZ0 132 aa11.97□□□□□ -0.49
CDH23-207ENST00000442677 NDUFA7O95182 113 aa11.96□□□□□ -0.49
CDH23-207ENST00000442677 C5orf56Q8N8D9 126 aa11.96□□□□□ -0.49
CDH23-207ENST00000442677 C20orf203Q8NBC4 194 aa11.96□□□□□ -0.49
CDH23-207ENST00000442677 C3orf84H3BNL1 204 aa11.96□□□□□ -0.5
CDH23-207ENST00000442677 PLXNB3Q9ULL4 1909 aa11.96□□□□□ -0.5
CDH23-207ENST00000442677 TRBV6-1A0A0K0K1D8 114 aa11.95□□□□□ -0.5
CDH23-207ENST00000442677 TRIAP1O43715 76 aa11.95□□□□□ -0.5
CDH23-207ENST00000442677 Q8N9W7 124 aa11.95□□□□□ -0.5
CDH23-207ENST00000442677 LRCOL1A6NCL2 159 aa11.95□□□□□ -0.5
CDH23-207ENST00000442677 PCDH15Q96QU1 1955 aa11.95□□□□□ -0.5
CDH23-207ENST00000442677 ZFAND3Q9H8U3 227 aa11.95□□□□□ -0.5
CDH23-207ENST00000442677 MALRD1Q5VYJ5 2156 aa11.95□□□□□ -0.5
CDH23-207ENST00000442677 GDF5OSQ5U4N7 250 aa11.95□□□□□ -0.5
CDH23-207ENST00000442677 MRPS12O15235 138 aaKnown RBP11.94□□□□□ -0.5
CDH23-207ENST00000442677 LINC00269Q8N2A0 174 aa11.94□□□□□ -0.5
CDH23-207ENST00000442677 MED12LQ86YW9 2145 aa11.94□□□□□ -0.5
CDH23-207ENST00000442677 MED14OSP0DP75 135 aa11.94□□□□□ -0.5
CDH23-207ENST00000442677 NCOA6Q14686 2063 aaPredicted RBP11.94□□□□□ -0.5
CDH23-207ENST00000442677 C19orf71A6NCJ1 209 aa11.94□□□□□ -0.5
CDH23-207ENST00000442677 ANAPC1Q9H1A4 1944 aa11.93□□□□□ -0.5
CDH23-207ENST00000442677 IGHV4-30-4P0DP06 118 aa11.93□□□□□ -0.5
CDH23-207ENST00000442677 IGHV4-31P0DP07 118 aa11.93□□□□□ -0.5
CDH23-207ENST00000442677 DCANP1Q8TF63 244 aa11.93□□□□□ -0.5
CDH23-207ENST00000442677 MAPKAPK5-AS1Q8N8E1 139 aa11.93□□□□□ -0.5
CDH23-207ENST00000442677 C1orf158Q8N1D5 194 aa11.92□□□□□ -0.5
CDH23-207ENST00000442677 LINC00322Q6ZN03 302 aaPredicted RBP11.92□□□□□ -0.5
CDH23-207ENST00000442677 ZFAND2AQ8N6M9 145 aa11.92□□□□□ -0.5
CDH23-207ENST00000442677 DENND4CQ5VZ89 1909 aa11.92□□□□□ -0.5
CDH23-207ENST00000442677 IGHV4-61A0A0C4DH41 118 aa11.92□□□□□ -0.5
CDH23-207ENST00000442677 LINC00694P0DN24 101 aa11.92□□□□□ -0.5
CDH23-207ENST00000442677 ZNF80P51504 273 aaPredicted RBP11.92□□□□□ -0.5
CDH23-207ENST00000442677 LINC00467Q9BRT7 94 aa11.92□□□□□ -0.5
CDH23-207ENST00000442677 KIAA1671Q9BY89 1806 aa11.91□□□□□ -0.5
CDH23-207ENST00000442677 FAM19A1Q7Z5A9 133 aa11.91□□□□□ -0.5
CDH23-207ENST00000442677 ACACAQ13085 2346 aa11.91□□□□□ -0.5
CDH23-207ENST00000442677 IGKV1D-37A0A075B6S9 117 aa11.91□□□□□ -0.5
CDH23-207ENST00000442677 UNQ9165/PRO28630Q6UXU0 137 aa11.91□□□□□ -0.5
CDH23-207ENST00000442677 FAM30AQ9NZY2 134 aa11.91□□□□□ -0.5
CDH23-207ENST00000442677 IGLV2-14P01704 120 aa11.9□□□□□ -0.5
CDH23-207ENST00000442677 LY6G6EA0A0G2JKS1 128 aa11.9□□□□□ -0.5
CDH23-207ENST00000442677 IGFL3Q6UXB1 125 aa11.9□□□□□ -0.5
CDH23-207ENST00000442677 U3KQA8 63 aa11.9□□□□□ -0.5
CDH23-207ENST00000442677 TRBV27A0A0K0K1C4 114 aa11.9□□□□□ -0.5
CDH23-207ENST00000442677 ATP5EP2Q5VTU8 51 aa11.89□□□□□ -0.51
CDH23-207ENST00000442677 SERP2Q8N6R1 65 aa11.89□□□□□ -0.51
CDH23-207ENST00000442677 PLXNB1O43157 2135 aa11.89□□□□□ -0.51
CDH23-207ENST00000442677 TMEM223A0PJW6 202 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms