RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 FAM162BQ5T6X4 162 aa4.6□□□□□ -1.67
RFX3-206ENST00000442560 COX8CQ7Z4L0 72 aa4.6□□□□□ -1.67
RFX3-206ENST00000442560 ZFP82Q8N141 532 aa4.6□□□□□ -1.67
RFX3-206ENST00000442560 C15orf54Q8N8G6 183 aa4.6□□□□□ -1.67
RFX3-206ENST00000442560 MED28Q9H204 178 aa4.6□□□□□ -1.67
RFX3-206ENST00000442560 PLA2G2DQ9UNK4 145 aa4.6□□□□□ -1.67
RFX3-206ENST00000442560 ZFP30Q9Y2G7 519 aa4.6□□□□□ -1.67
RFX3-206ENST00000442560 USP17L23D6RBM5 183 aa4.59□□□□□ -1.67
RFX3-206ENST00000442560 HLA-DQA1P01909 254 aa4.59□□□□□ -1.67
RFX3-206ENST00000442560 SLPIP03973 132 aa4.59□□□□□ -1.67
RFX3-206ENST00000442560 ZNF56Q15929 161 aa4.59□□□□□ -1.67
RFX3-206ENST00000442560 AKR1C8PQ5T2L2 129 aa4.59□□□□□ -1.67
RFX3-206ENST00000442560 INO80EQ8NBZ0 244 aaPredicted RBP4.59□□□□□ -1.67
RFX3-206ENST00000442560 NEXN-AS1Q8NBZ9 246 aa4.59□□□□□ -1.67
RFX3-206ENST00000442560 OR10G8Q8NGN5 311 aa4.59□□□□□ -1.67
RFX3-206ENST00000442560 DAZAP1Q96EP5 407 aaKnown RBP4.59□□□□□ -1.67
RFX3-206ENST00000442560 FMC1Q96HJ9 113 aa4.59□□□□□ -1.67
RFX3-206ENST00000442560 CHCHD5Q9BSY4 110 aa4.59□□□□□ -1.67
RFX3-206ENST00000442560 NKX6-2Q9C056 277 aaPredicted RBP4.59□□□□□ -1.67
RFX3-206ENST00000442560 UBR4Q5T4S7 5183 aa4.59□□□□□ -1.68
RFX3-206ENST00000442560 SRRM2Q9UQ35 2752 aaKnown RBP4.58□□□□□ -1.68
RFX3-206ENST00000442560 FXYD6-FXYD2A0A087WZ82 144 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 MUC21A0A0G2JKD1 596 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 TRBV6-1A0A0K0K1D8 114 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 MUC21A0A140T8X8 626 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 MAP1LC3B2A6NCE7 125 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 PTTG1O95997 202 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 PRSS1P07477 247 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 RAB4BP61018 213 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 SSTP61278 116 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 RPL19P84098 196 aaKnown RBP4.58□□□□□ -1.68
RFX3-206ENST00000442560 CST9LP1Q5W188 147 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 CLPSL2Q6UWE3 100 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 MAP1LC3BQ9GZQ8 125 aa4.58□□□□□ -1.68
RFX3-206ENST00000442560 F5H697 171 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 PANO1I0J062 215 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 LTAP01374 205 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 GIPP09681 153 aaPredicted RBP4.57□□□□□ -1.68
RFX3-206ENST00000442560 AKR1C3P42330 323 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 GAGE6Q13070 117 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 DGAT2L7PQ6IED9 249 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 PRR27Q6MZM9 219 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 NTM-AS1Q6ZSK4 140 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 C9orf163Q8N9P6 203 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 OR10AG1Q8NH19 301 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 STOML3Q8TAV4 291 aa4.57□□□□□ -1.68
RFX3-206ENST00000442560 ZNF471Q9BX82 626 aaPredicted RBP4.57□□□□□ -1.68
RFX3-206ENST00000442560 PAGE4O60829 102 aa4.56□□□□□ -1.68
RFX3-206ENST00000442560 FHITP49789 147 aa4.56□□□□□ -1.68
RFX3-206ENST00000442560 PKIAP61925 76 aa4.56□□□□□ -1.68
RFX3-206ENST00000442560 RBX1P62877 108 aa4.56□□□□□ -1.68
RFX3-206ENST00000442560 MIAQ16674 131 aa4.56□□□□□ -1.68
RFX3-206ENST00000442560 SPANXN1Q5VSR9 72 aa4.56□□□□□ -1.68
RFX3-206ENST00000442560 KRTAP26-1Q6PEX3 210 aa4.56□□□□□ -1.68
RFX3-206ENST00000442560 LINC00269Q8N2A0 174 aa4.56□□□□□ -1.68
RFX3-206ENST00000442560 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.56□□□□□ -1.68
RFX3-206ENST00000442560 DERL1Q9BUN8 251 aa4.56□□□□□ -1.68
RFX3-206ENST00000442560 CYTL1Q9NRR1 136 aa4.56□□□□□ -1.68
RFX3-206ENST00000442560 IGLV10-54A0A075B6I4 117 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 A0A1B0GV50 99 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 SNAI2O43623 268 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 CXCL1P09341 107 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 TMEM97Q5BJF2 176 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 SDIM1Q6ZPB5 146 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 BAGE2Q86Y30 109 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 TCEAL7Q9BRU2 100 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 PRR34Q9NV39 138 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 VAX2Q9UIW0 290 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 KIF25-AS1Q9Y6Z4 181 aa4.55□□□□□ -1.68
RFX3-206ENST00000442560 TRBV25-1A0A075B6N4 114 aa4.54□□□□□ -1.68
RFX3-206ENST00000442560 G3V3Q6 166 aa4.54□□□□□ -1.68
RFX3-206ENST00000442560 ARPC5O15511 151 aa4.54□□□□□ -1.68
RFX3-206ENST00000442560 S100A9P06702 114 aaKnown RBP4.54□□□□□ -1.68
RFX3-206ENST00000442560 OR5AL1P0C617 328 aa4.54□□□□□ -1.68
RFX3-206ENST00000442560 SMIM17P0DL12 118 aa4.54□□□□□ -1.68
RFX3-206ENST00000442560 MT1HL1P0DM35 61 aa4.54□□□□□ -1.68
RFX3-206ENST00000442560 DPH3Q96FX2 82 aa4.54□□□□□ -1.68
RFX3-206ENST00000442560 MLST8Q9BVC4 326 aa4.54□□□□□ -1.68
RFX3-206ENST00000442560 KRTAP3-1Q9BYR8 98 aa4.54□□□□□ -1.68
RFX3-206ENST00000442560 IGHV1-24A0A0C4DH33 117 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 A0A0D9SG52 128 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 PFDN1O60925 122 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 MGPP08493 103 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 CHTF8P0CG12 524 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 RAB5CP51148 216 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 REG3AQ06141 175 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 IQCJQ1A5X6 159 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 C20orf203Q8NBC4 194 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 CLRN3Q8NCR9 226 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 FAM213BQ8TBF2 198 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 SFT2D1Q8WV19 159 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 MBD3L1Q8WWY6 194 aa4.53□□□□□ -1.68
RFX3-206ENST00000442560 IGLV4-60A0A075B6I1 120 aa4.52□□□□□ -1.69
RFX3-206ENST00000442560 IGHV3-64A0A075B6Q5 118 aa4.52□□□□□ -1.69
RFX3-206ENST00000442560 A0A087WYN8 130 aa4.52□□□□□ -1.69
RFX3-206ENST00000442560 hDV102S1A0JD36 115 aa4.52□□□□□ -1.69
RFX3-206ENST00000442560 SMLR1H3BR10 107 aa4.52□□□□□ -1.69
RFX3-206ENST00000442560 GZMBP10144 247 aa4.52□□□□□ -1.69
RFX3-206ENST00000442560 NKX2-5P52952 324 aaPredicted RBP4.52□□□□□ -1.69
RFX3-206ENST00000442560 CNBPP62633 177 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms