RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 ZNF236Q9UL36 1845 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 IGHV4-28A0A0C4DH34 117 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 ALPK3Q96L96 1907 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 IGKV3-20P01619 116 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 SDK2Q58EX2 2172 aa4.19□□□□□ -1.74
PTPRC-209ENST00000442510 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
PTPRC-209ENST00000442510 A0A0J9YX75 114 aa4.18□□□□□ -1.74
PTPRC-209ENST00000442510 IGHV3-23P01764 117 aa4.18□□□□□ -1.74
PTPRC-209ENST00000442510 C22orf34Q6ZV56 151 aa4.18□□□□□ -1.74
PTPRC-209ENST00000442510 C17orf82Q86X59 251 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-209ENST00000442510 SMCR5Q8TEV8 140 aa4.18□□□□□ -1.74
PTPRC-209ENST00000442510 CCL17Q92583 94 aa4.18□□□□□ -1.74
PTPRC-209ENST00000442510 LINC00208Q96KT6 92 aa4.18□□□□□ -1.74
PTPRC-209ENST00000442510 ATG2AQ2TAZ0 1938 aa4.18□□□□□ -1.74
PTPRC-209ENST00000442510 GLI3P10071 1580 aa4.18□□□□□ -1.74
PTPRC-209ENST00000442510 PSPNO60542 156 aa4.18□□□□□ -1.74
PTPRC-209ENST00000442510 TRBV6-8A0A0A6YYG3 113 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 DEFB133Q30KQ1 61 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 PATE2Q6UY27 113 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 CEP290O15078 2479 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 H3BRN7 92 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 IGLV3-19P01714 112 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 ADAMTSL4-AS1Q5T5F5 129 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 SEM1Q6ZVN7 128 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 C6orf223Q8N319 242 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 PRR26Q8N8Z3 221 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 NDUFA4L2Q9NRX3 87 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 OBSL1O75147 1896 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 RALGAPA2Q2PPJ7 1873 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 PCNX3Q9H6A9 2034 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 GYPEP15421 78 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 PIP4P2Q8N4L2 257 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 Q9Y3F1 56 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 USF3Q68DE3 2245 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 IGFL2Q6UWQ7 119 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 FP248Q71RG6 208 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-209ENST00000442510 TM2D3Q9BRN9 247 aa4.17□□□□□ -1.74
PTPRC-209ENST00000442510 IGHV3-73A0A0B4J1V6 119 aa4.16□□□□□ -1.74
PTPRC-209ENST00000442510 VMO1Q7Z5L0 202 aa4.16□□□□□ -1.74
PTPRC-209ENST00000442510 B9D2Q9BPU9 175 aa4.16□□□□□ -1.74
PTPRC-209ENST00000442510 hDV103S1A0JD37 113 aa4.16□□□□□ -1.74
PTPRC-209ENST00000442510 RNASE3P12724 160 aaKnown RBP4.16□□□□□ -1.74
PTPRC-209ENST00000442510 CDK2AP2O75956 126 aa4.16□□□□□ -1.74
PTPRC-209ENST00000442510 IGLV3-21P80748 117 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-209ENST00000442510 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.16□□□□□ -1.74
PTPRC-209ENST00000442510 VWA8A3KMH1 1905 aa4.16□□□□□ -1.74
PTPRC-209ENST00000442510 ABCA3Q99758 1704 aa4.16□□□□□ -1.74
PTPRC-209ENST00000442510 PSMG3-AS1Q96PY0 264 aa4.16□□□□□ -1.74
PTPRC-209ENST00000442510 CCL26Q9Y258 94 aa4.16□□□□□ -1.74
PTPRC-209ENST00000442510 IGLV3-32A0A0A0MS00 114 aa4.15□□□□□ -1.74
PTPRC-209ENST00000442510 OXTP01178 125 aa4.15□□□□□ -1.74
PTPRC-209ENST00000442510 CCL5P13501 91 aa4.15□□□□□ -1.74
PTPRC-209ENST00000442510 DIRC1Q969H9 104 aa4.15□□□□□ -1.74
PTPRC-209ENST00000442510 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.15□□□□□ -1.74
PTPRC-209ENST00000442510 PLXNA3P51805 1871 aa4.15□□□□□ -1.74
PTPRC-209ENST00000442510 KLF14Q8TD94 323 aaPredicted RBP4.15□□□□□ -1.74
PTPRC-209ENST00000442510 RNF185Q96GF1 192 aa4.15□□□□□ -1.74
PTPRC-209ENST00000442510 PLXNB3Q9ULL4 1909 aa4.15□□□□□ -1.74
PTPRC-209ENST00000442510 IGKV1OR2-108A0A075B7D4 117 aa4.15□□□□□ -1.75
PTPRC-209ENST00000442510 HIGD2AQ9BW72 106 aa4.15□□□□□ -1.75
PTPRC-209ENST00000442510 MAP1BP46821 2468 aaKnown RBP4.15□□□□□ -1.75
PTPRC-209ENST00000442510 PHLPP1O60346 1717 aa4.15□□□□□ -1.75
PTPRC-209ENST00000442510 IGKV1-16P04430 117 aa4.15□□□□□ -1.75
PTPRC-209ENST00000442510 ANK1P16157 1881 aa4.15□□□□□ -1.75
PTPRC-209ENST00000442510 LINC01547P58512 204 aaPredicted RBP4.15□□□□□ -1.75
PTPRC-209ENST00000442510 NHSQ6T4R5 1651 aa4.15□□□□□ -1.75
PTPRC-209ENST00000442510 ZNF524Q96C55 264 aa4.15□□□□□ -1.75
PTPRC-209ENST00000442510 GPHB5Q86YW7 130 aa4.14□□□□□ -1.75
PTPRC-209ENST00000442510 ZNF831Q5JPB2 1677 aa4.14□□□□□ -1.75
PTPRC-209ENST00000442510 AKAP6Q13023 2319 aa4.14□□□□□ -1.75
PTPRC-209ENST00000442510 NDUFA4O00483 81 aa4.14□□□□□ -1.75
PTPRC-209ENST00000442510 NDUFA1O15239 70 aa4.14□□□□□ -1.75
PTPRC-209ENST00000442510 LY6HO94772 140 aa4.14□□□□□ -1.75
PTPRC-209ENST00000442510 FOXL2NBQ6ZUU3 175 aa4.14□□□□□ -1.75
PTPRC-209ENST00000442510 C20orf203Q8NBC4 194 aa4.14□□□□□ -1.75
PTPRC-209ENST00000442510 RNASE6Q93091 150 aaKnown RBP4.14□□□□□ -1.75
PTPRC-209ENST00000442510 LPAL2Q16609 132 aa4.14□□□□□ -1.75
PTPRC-209ENST00000442510 ZNF491Q8N8L2 437 aa4.14□□□□□ -1.75
PTPRC-209ENST00000442510 E7EUB6 86 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 WT1-ASQ06250 92 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 KRTAP27-1Q3LI81 207 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 NTM-AS1Q6ZSK4 140 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 Q6ZSV7 163 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 IGHV3OR16-12A0A075B7B8 117 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 SYCNQ0VAF6 134 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 IGHV4OR15-8A0A075B7B6 117 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 IGHV4-30-2A0A087WSY4 118 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 A0A087WW49 117 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 ERC2-IT1O76042 136 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 IGLV3-1P01715 115 aa4.13□□□□□ -1.75
PTPRC-209ENST00000442510 Q1T7F1 81 aa4.12□□□□□ -1.75
PTPRC-209ENST00000442510 TNRC6CQ9HCJ0 1690 aaKnown RBP4.12□□□□□ -1.75
PTPRC-209ENST00000442510 NRAPQ86VF7 1730 aa4.12□□□□□ -1.75
PTPRC-209ENST00000442510 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.12□□□□□ -1.751e-11■■■■□ 24.8
PTPRC-209ENST00000442510 HELZP42694 1942 aaKnown RBP4.12□□□□□ -1.75
PTPRC-209ENST00000442510 EPOPA6NHQ4 379 aa4.12□□□□□ -1.75
PTPRC-209ENST00000442510 Q8N9L7 120 aa4.12□□□□□ -1.75
PTPRC-209ENST00000442510 C7orf69Q9H7B7 122 aa4.12□□□□□ -1.75
PTPRC-209ENST00000442510 PCNX2A6NKB5 2137 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms