RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 IGLV11-55A0A075B6I3 123 aa5.69□□□□□ -1.5
HDAC9-214ENST00000441542 LGALS9O00182 355 aa5.69□□□□□ -1.5
HDAC9-214ENST00000441542 CD3EP07766 207 aa5.69□□□□□ -1.5
HDAC9-214ENST00000441542 FAM19A5Q7Z5A7 132 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-214ENST00000441542 SBSPONQ8IVN8 264 aa5.69□□□□□ -1.5
HDAC9-214ENST00000441542 TMEM263Q8WUH6 116 aaKnown RBP5.69□□□□□ -1.5
HDAC9-214ENST00000441542 SPANXCQ9NY87 97 aa5.69□□□□□ -1.5
HDAC9-214ENST00000441542 IGHV3-73A0A0B4J1V6 119 aa5.69□□□□□ -1.5
HDAC9-214ENST00000441542 TRBV10-2A0A0K0K1G8 114 aa5.69□□□□□ -1.5
HDAC9-214ENST00000441542 LINC01546A6NGU7 62 aa5.69□□□□□ -1.5
HDAC9-214ENST00000441542 RPL13AP40429 203 aaKnown RBP5.69□□□□□ -1.5
HDAC9-214ENST00000441542 RNASE6Q93091 150 aaKnown RBP5.69□□□□□ -1.5
HDAC9-214ENST00000441542 CD59P13987 128 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 DPM3Q9P2X0 92 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 FAM208BQ5VWN6 2430 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 PTPRQQ9UMZ3 2332 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 A0A1B0GX51 115 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 SDHAF1A6NFY7 115 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 LINC01619G3V211 115 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 H7C423 109 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 MALP21145 153 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 HERVK_113P63121 156 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 LY6DQ14210 128 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 NSUN5P1Q3KNT7 163 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 LINC01587Q99440 93 aa5.68□□□□□ -1.5
HDAC9-214ENST00000441542 TLN1Q9Y490 2541 aaKnown RBP5.68□□□□□ -1.5
HDAC9-214ENST00000441542 CLPSL1A2RUU4 121 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 BUB3O43684 328 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 RPS28P62857 69 aaKnown RBP5.67□□□□□ -1.5
HDAC9-214ENST00000441542 PRR30Q53SZ7 412 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-214ENST00000441542 C20orf173Q96LM9 149 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 USP24Q9UPU5 2620 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 J3KT08 172 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 M0R2P5 195 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 COX6CP09669 75 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 ZNF672Q499Z4 452 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-214ENST00000441542 Q6Q795 121 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 TMEM101Q96IK0 257 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 METTL26Q96S19 204 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 ICOSQ9Y6W8 199 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 FLNBO75369 2602 aaKnown RBP5.67□□□□□ -1.5
HDAC9-214ENST00000441542 IGHV3OR16-10A0A075B7F0 116 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 NPFFO15130 113 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 IGHV3-11P01762 117 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 PIP4P1Q86T03 277 aa5.67□□□□□ -1.5
HDAC9-214ENST00000441542 MAP1AP78559 2803 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-214ENST00000441542 SUMO4Q6EEV6 95 aa5.66□□□□□ -1.5
HDAC9-214ENST00000441542 PEMTQ9UBM1 199 aa5.66□□□□□ -1.5
HDAC9-214ENST00000441542 ANKHD1Q8IWZ3 2542 aaKnown RBP5.66□□□□□ -1.5
HDAC9-214ENST00000441542 TRAV13-1A0A0B4J241 112 aa5.66□□□□□ -1.5
HDAC9-214ENST00000441542 MBD3L2Q8NHZ7 208 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-214ENST00000441542 hADV29S1A0JD25 119 aa5.65□□□□□ -1.5
HDAC9-214ENST00000441542 TRAV21A0A0B4J279 112 aa5.65□□□□□ -1.51
HDAC9-214ENST00000441542 E7EQL1 145 aa5.65□□□□□ -1.51
HDAC9-214ENST00000441542 RNF223E7ERA6 249 aa5.65□□□□□ -1.51
HDAC9-214ENST00000441542 C4orf26Q17RF5 130 aa5.65□□□□□ -1.51
HDAC9-214ENST00000441542 ADAMTSL4-AS1Q5T5F5 129 aa5.65□□□□□ -1.51
HDAC9-214ENST00000441542 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.65□□□□□ -1.51
HDAC9-214ENST00000441542 A0A0J9YXY3 114 aa5.65□□□□□ -1.51
HDAC9-214ENST00000441542 IGIPA6NJ69 53 aa5.65□□□□□ -1.51
HDAC9-214ENST00000441542 HOXD3P31249 432 aaPredicted RBP5.65□□□□□ -1.51
HDAC9-214ENST00000441542 PAPPA-AS1Q5QFB9 102 aa5.65□□□□□ -1.51
HDAC9-214ENST00000441542 GAGE2AQ6NT46 116 aa5.65□□□□□ -1.51
HDAC9-214ENST00000441542 MDFICQ9P1T7 246 aa5.65□□□□□ -1.51
HDAC9-214ENST00000441542 TRAV12-2A0A075B6T6 113 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 ATP6V0E1O15342 81 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 ZNF883P0CG24 379 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 RHOHQ15669 191 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 COX8CQ7Z4L0 72 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 TMEM219Q86XT9 240 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 GPHB5Q86YW7 130 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 LINC01560Q8TB33 94 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 NOTCH2Q04721 2471 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 I3L3M4 83 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 NDUFA7O95182 113 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 PSMG3-AS1Q96PY0 264 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 AMELXQ99217 191 aa5.64□□□□□ -1.51
HDAC9-214ENST00000441542 IGKV3D-7A0A0C4DH55 119 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 M0R1W7 72 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 VCYO14598 125 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 CD28P10747 220 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 ZNF876PQ49A33 203 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 VMO1Q7Z5L0 202 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 TIMM21Q9BVV7 248 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 KLK9Q9UKQ9 250 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 IGHV7-81A0A0B4J1V7 117 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 A0A0G2JNJ9 132 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 KNCNA6PVL3 124 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 NXPH4O95158 308 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 P0DMU3 169 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 FAM231AP0DMU4 169 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 FAM231CP0DMU5 169 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 Q9UFV3 132 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 NDUFA12Q9UI09 145 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 A0A0B4J2C4 111 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 LEPROTO15243 131 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 TRBV12-3P01733 135 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 IGHV3-30-3P0DP02 117 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 ZFAND2AQ8N6M9 145 aa5.63□□□□□ -1.51
HDAC9-214ENST00000441542 PRORYQ9H606 182 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms