RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SLC50A1Q9BRV3 221 aa7.65□□□□□ -1.18
SYNE2-206ENST00000441438 MRPL33O75394 65 aaKnown RBP7.65□□□□□ -1.19
SYNE2-206ENST00000441438 IGLV2-14P01704 120 aa7.65□□□□□ -1.19
SYNE2-206ENST00000441438 FXYD2P54710 66 aa7.65□□□□□ -1.19
SYNE2-206ENST00000441438 ABCA1O95477 2261 aa7.65□□□□□ -1.19
SYNE2-206ENST00000441438 COL12A1Q99715 3063 aa7.64□□□□□ -1.19
SYNE2-206ENST00000441438 LINC01548A6NM66 108 aa7.64□□□□□ -1.19
SYNE2-206ENST00000441438 IGHV1-2P23083 117 aa7.64□□□□□ -1.19
SYNE2-206ENST00000441438 ZFP36P26651 326 aaKnown RBP7.64□□□□□ -1.19
SYNE2-206ENST00000441438 SPANXN5Q5MJ07 72 aa7.64□□□□□ -1.19
SYNE2-206ENST00000441438 SLC25A29Q8N8R3 303 aa7.64□□□□□ -1.19
SYNE2-206ENST00000441438 DAND5Q8N907 189 aa7.64□□□□□ -1.19
SYNE2-206ENST00000441438 P0C879 139 aa7.64□□□□□ -1.19
SYNE2-206ENST00000441438 ADAMTSL4-AS1Q5T5F5 129 aa7.64□□□□□ -1.19
SYNE2-206ENST00000441438 NRACQ8N912 160 aa7.64□□□□□ -1.19
SYNE2-206ENST00000441438 CSMD1Q96PZ7 3565 aa7.63□□□□□ -1.19
SYNE2-206ENST00000441438 ITPR1Q14643 2758 aa7.63□□□□□ -1.19
SYNE2-206ENST00000441438 ODF3L2Q3SX64 289 aa7.63□□□□□ -1.19
SYNE2-206ENST00000441438 Q8N7P7 452 aa7.63□□□□□ -1.19
SYNE2-206ENST00000441438 IGHV1OR15-1A0A075B7D0 117 aa7.63□□□□□ -1.19
SYNE2-206ENST00000441438 TFF1P04155 84 aa7.63□□□□□ -1.19
SYNE2-206ENST00000441438 PRB1P04280 392 aa7.63□□□□□ -1.19
SYNE2-206ENST00000441438 IGHV4-30-4P0DP06 118 aa7.63□□□□□ -1.19
SYNE2-206ENST00000441438 RHOHQ15669 191 aa7.63□□□□□ -1.19
SYNE2-206ENST00000441438 PATE2Q6UY27 113 aa7.63□□□□□ -1.19
SYNE2-206ENST00000441438 SVEP1Q4LDE5 3571 aa7.62□□□□□ -1.19
SYNE2-206ENST00000441438 SPTAN1Q13813 2472 aaKnown RBP7.62□□□□□ -1.19
SYNE2-206ENST00000441438 IGKV1D-17A0A075B6S4 117 aa7.62□□□□□ -1.19
SYNE2-206ENST00000441438 IGHV3-43DP0DP04 118 aa7.62□□□□□ -1.19
SYNE2-206ENST00000441438 NHP2Q9NX24 153 aaKnown RBP7.62□□□□□ -1.19
SYNE2-206ENST00000441438 CELA1Q9UNI1 258 aa7.62□□□□□ -1.19
SYNE2-206ENST00000441438 ASH1LQ9NR48 2969 aaKnown RBP7.62□□□□□ -1.19
SYNE2-206ENST00000441438 MED13LQ71F56 2210 aa7.62□□□□□ -1.19
SYNE2-206ENST00000441438 LINC00643Q86TS7 51 aa7.62□□□□□ -1.19
SYNE2-206ENST00000441438 MPLKIPQ8TAP9 179 aa7.62□□□□□ -1.19
SYNE2-206ENST00000441438 CLEC2BQ92478 149 aa7.62□□□□□ -1.19
SYNE2-206ENST00000441438 AKAP6Q13023 2319 aa7.61□□□□□ -1.19
SYNE2-206ENST00000441438 TMEM170BQ5T4T1 132 aa7.61□□□□□ -1.19
SYNE2-206ENST00000441438 FAM53AQ6NSI3 398 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-206ENST00000441438 IGSF10Q6WRI0 2623 aa7.61□□□□□ -1.19
SYNE2-206ENST00000441438 FGF23Q9GZV9 251 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-206ENST00000441438 ABCA4P78363 2273 aa7.61□□□□□ -1.19
SYNE2-206ENST00000441438 GCHFRP30047 84 aa7.61□□□□□ -1.19
SYNE2-206ENST00000441438 ATP11AUNQ6ZP68 121 aa7.61□□□□□ -1.19
SYNE2-206ENST00000441438 COL6A6A6NMZ7 2263 aa7.61□□□□□ -1.19
SYNE2-206ENST00000441438 MAP1AP78559 2803 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-206ENST00000441438 E7EQL1 145 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 LRBAP50851 2863 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 ZZEF1O43149 2961 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 TRGV8A0A0C4DH27 118 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 H7BZZ5 65 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 FAM223AQ8IWN6 122 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 FAM19A2Q8N3H0 131 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 IGHV1-24A0A0C4DH33 117 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 BMPR1BO00238 502 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 ACYP1P07311 99 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 TFF3Q07654 80 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 NABP2Q9BQ15 211 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 V9GYV3 84 aa7.6□□□□□ -1.19
SYNE2-206ENST00000441438 ZGRF1Q86YA3 2104 aa7.59□□□□□ -1.19
SYNE2-206ENST00000441438 C16orf97H3BN30 126 aa7.59□□□□□ -1.19
SYNE2-206ENST00000441438 OSTCQ9NRP0 149 aa7.59□□□□□ -1.19
SYNE2-206ENST00000441438 DSCAML1Q8TD84 2053 aa7.59□□□□□ -1.19
SYNE2-206ENST00000441438 TLN1Q9Y490 2541 aaKnown RBP7.59□□□□□ -1.19
SYNE2-206ENST00000441438 CD28P10747 220 aa7.59□□□□□ -1.19
SYNE2-206ENST00000441438 C7orf69Q9H7B7 122 aa7.59□□□□□ -1.19
SYNE2-206ENST00000441438 TNCP24821 2201 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 K7EQG2 157 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 EIF4EBP1Q13541 118 aaPredicted RBP7.58□□□□□ -1.2
SYNE2-206ENST00000441438 TTTY12Q9BZ98 90 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 IGHV4-61A0A0C4DH41 118 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 IGHV3-13P01766 116 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 IGHV4-59P01825 116 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 AGRNO00468 2067 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 ATRXP46100 2492 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 TMSB15BA0A087X1C1 80 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 C19orf71A6NCJ1 209 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 TSHBP01222 138 aa7.58□□□□□ -1.2
SYNE2-206ENST00000441438 IGHV3OR15-7A0A075B7D8 119 aa7.57□□□□□ -1.2
SYNE2-206ENST00000441438 SCO2A0A1W2PP80 73 aa7.57□□□□□ -1.2
SYNE2-206ENST00000441438 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
SYNE2-206ENST00000441438 DEFB109BQ30KR1 87 aa7.57□□□□□ -1.2
SYNE2-206ENST00000441438 NUP37Q8NFH4 326 aa7.57□□□□□ -1.2
SYNE2-206ENST00000441438 ZFYVE26Q68DK2 2539 aa7.56□□□□□ -1.2
SYNE2-206ENST00000441438 SPTBN1Q01082 2364 aaKnown RBP7.56□□□□□ -1.2
SYNE2-206ENST00000441438 IGLV3-9A0A075B6K5 115 aa7.56□□□□□ -1.2
SYNE2-206ENST00000441438 INAFM1C9JVW0 142 aa7.56□□□□□ -1.2
SYNE2-206ENST00000441438 LEPROTO15243 131 aa7.56□□□□□ -1.2
SYNE2-206ENST00000441438 DKK2Q9UBU2 259 aa7.56□□□□□ -1.2
SYNE2-206ENST00000441438 BAHCC1Q9P281 2608 aa7.56□□□□□ -1.2
SYNE2-206ENST00000441438 DSCAMO60469 2012 aa7.56□□□□□ -1.2
SYNE2-206ENST00000441438 SMIM27A0A1W2PRY6 76 aa7.56□□□□□ -1.2
SYNE2-206ENST00000441438 ARL14EPLP0DKL9 152 aa7.56□□□□□ -1.2
SYNE2-206ENST00000441438 CKS2P33552 79 aa7.56□□□□□ -1.2
SYNE2-206ENST00000441438 UBE2D3P61077 147 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 UBE2D2P62837 147 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 SPINK9Q5DT21 86 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 ZNF497Q6ZNH5 498 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 ZNF826PQ6ZT77 177 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 SLC25A2Q9BXI2 301 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms