RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 GAGE12IP0CL82 117 aa13.66□□□□□ -0.22
SNX17-203ENST00000440760 P0DMU3 169 aa13.66□□□□□ -0.22
SNX17-203ENST00000440760 FAM231AP0DMU4 169 aa13.66□□□□□ -0.22
SNX17-203ENST00000440760 FAM231CP0DMU5 169 aa13.66□□□□□ -0.22
SNX17-203ENST00000440760 SUMO2P61956 95 aaKnown RBP13.66□□□□□ -0.22
SNX17-203ENST00000440760 NEGR1Q7Z3B1 354 aa13.66□□□□□ -0.22
SNX17-203ENST00000440760 OR11H2Q8NH07 326 aa13.65□□□□□ -0.22
SNX17-203ENST00000440760 DEFB104AQ8WTQ1 72 aa13.65□□□□□ -0.22
SNX17-203ENST00000440760 ZNF479Q96JC4 524 aa13.65□□□□□ -0.22
SNX17-203ENST00000440760 SMIM2Q9BVW6 85 aa13.65□□□□□ -0.22
SNX17-203ENST00000440760 DEFB4AO15263 64 aa13.65□□□□□ -0.22
SNX17-203ENST00000440760 A0A096LNJ9 63 aa13.64□□□□□ -0.23
SNX17-203ENST00000440760 TCAPO15273 167 aa13.64□□□□□ -0.23
SNX17-203ENST00000440760 Q8N8P6 123 aa13.64□□□□□ -0.23
SNX17-203ENST00000440760 OR4C5Q8NGB2 326 aa13.64□□□□□ -0.23
SNX17-203ENST00000440760 NXT2Q9NPJ8 142 aaKnown RBP13.64□□□□□ -0.23
SNX17-203ENST00000440760 LGALS9BQ3B8N2 356 aa13.63□□□□□ -0.23
SNX17-203ENST00000440760 LINC00173Q6ZV60 143 aa13.63□□□□□ -0.23
SNX17-203ENST00000440760 OVOL2Q9BRP0 275 aa13.63□□□□□ -0.23
SNX17-203ENST00000440760 Q9UF83 564 aa13.63□□□□□ -0.23
SNX17-203ENST00000440760 C20orf78Q9BR46 151 aa13.63□□□□□ -0.23
SNX17-203ENST00000440760 RETNQ9HD89 108 aa13.63□□□□□ -0.23
SNX17-203ENST00000440760 PRSS47A8MTI9 375 aa13.62□□□□□ -0.23
SNX17-203ENST00000440760 RHODO00212 210 aa13.62□□□□□ -0.23
SNX17-203ENST00000440760 ST20Q9HBF5 79 aa13.62□□□□□ -0.23
SNX17-203ENST00000440760 TRGV2A0A075B6R0 118 aa13.62□□□□□ -0.23
SNX17-203ENST00000440760 IGHV4-28A0A0C4DH34 117 aa13.62□□□□□ -0.23
SNX17-203ENST00000440760 MRPL52Q86TS9 123 aaKnown RBP13.62□□□□□ -0.23
SNX17-203ENST00000440760 RNF183Q96D59 192 aa13.62□□□□□ -0.23
SNX17-203ENST00000440760 SMIM9A6NGZ8 99 aa13.61□□□□□ -0.23
SNX17-203ENST00000440760 KRTDAPP60985 99 aa13.61□□□□□ -0.23
SNX17-203ENST00000440760 TMEM70Q9BUB7 260 aa13.61□□□□□ -0.23
SNX17-203ENST00000440760 TRAV4A0A0B4J268 109 aa13.6□□□□□ -0.23
SNX17-203ENST00000440760 SDHAF1A6NFY7 115 aa13.6□□□□□ -0.23
SNX17-203ENST00000440760 LINC01546A6NGU7 62 aa13.6□□□□□ -0.23
SNX17-203ENST00000440760 A8MZ25 164 aa13.6□□□□□ -0.23
SNX17-203ENST00000440760 PPP1R17O96001 155 aa13.6□□□□□ -0.23
SNX17-203ENST00000440760 SCGB1D1O95968 90 aa13.6□□□□□ -0.23
SNX17-203ENST00000440760 DEFB130BP0DP73 79 aa13.6□□□□□ -0.23
SNX17-203ENST00000440760 DEFB130AP0DP74 79 aa13.6□□□□□ -0.23
SNX17-203ENST00000440760 Q8NAQ8 132 aa13.6□□□□□ -0.23
SNX17-203ENST00000440760 DNHD1Q96M86 4753 aa13.59□□□□□ -0.23
SNX17-203ENST00000440760 M0R143 59 aa13.59□□□□□ -0.23
SNX17-203ENST00000440760 LEPROTL1O95214 131 aa13.59□□□□□ -0.23
SNX17-203ENST00000440760 ZFP2Q6ZN57 461 aa13.59□□□□□ -0.23
SNX17-203ENST00000440760 TRBV6-5A0A0K0K1A5 114 aa13.58□□□□□ -0.24
SNX17-203ENST00000440760 POLR2KP53803 58 aaKnown RBP13.58□□□□□ -0.24
SNX17-203ENST00000440760 H7C1H1 209 aa13.58□□□□□ -0.24
SNX17-203ENST00000440760 HBDP02042 147 aa13.58□□□□□ -0.24
SNX17-203ENST00000440760 C3orf79P0CE67 100 aa13.58□□□□□ -0.24
SNX17-203ENST00000440760 RIPPLY3P57055 190 aa13.58□□□□□ -0.24
SNX17-203ENST00000440760 FAM222AQ5U5X8 452 aa13.58□□□□□ -0.24
SNX17-203ENST00000440760 EDA2RQ9HAV5 297 aa13.58□□□□□ -0.24
SNX17-203ENST00000440760 EREGO14944 169 aa13.57□□□□□ -0.24
SNX17-203ENST00000440760 LAGE3Q14657 143 aa13.57□□□□□ -0.24
SNX17-203ENST00000440760 SNHG12Q9BXW3 62 aa13.57□□□□□ -0.24
SNX17-203ENST00000440760 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
SNX17-203ENST00000440760 BTF3P20290 206 aaKnown RBP13.56□□□□□ -0.24
SNX17-203ENST00000440760 CELA1Q9UNI1 258 aa13.56□□□□□ -0.24
SNX17-203ENST00000440760 TENM3Q9P273 2699 aa13.55□□□□□ -0.24
SNX17-203ENST00000440760 K7EIL1 84 aa13.55□□□□□ -0.24
SNX17-203ENST00000440760 MIFP14174 115 aa13.55□□□□□ -0.24
SNX17-203ENST00000440760 LINC00612Q8N6U2 182 aa13.55□□□□□ -0.24
SNX17-203ENST00000440760 FCER1GP30273 86 aa13.54□□□□□ -0.24
SNX17-203ENST00000440760 SPATA12Q7Z6I5 190 aa13.54□□□□□ -0.24
SNX17-203ENST00000440760 C18orf15Q96N68 181 aa13.54□□□□□ -0.24
SNX17-203ENST00000440760 TRBV27A0A0K0K1C4 114 aa13.54□□□□□ -0.24
SNX17-203ENST00000440760 H0Y8G0 127 aa13.54□□□□□ -0.24
SNX17-203ENST00000440760 RPL32P62910 135 aaKnown RBP13.54□□□□□ -0.24
SNX17-203ENST00000440760 DKK2Q9UBU2 259 aa13.54□□□□□ -0.24
SNX17-203ENST00000440760 K7EQD1 137 aa13.53□□□□□ -0.24
SNX17-203ENST00000440760 VCYO14598 125 aa13.53□□□□□ -0.24
SNX17-203ENST00000440760 NUDT3O95989 172 aa13.53□□□□□ -0.24
SNX17-203ENST00000440760 KPRPQ5T749 579 aaPredicted RBP13.53□□□□□ -0.24
SNX17-203ENST00000440760 SLC25A29Q8N8R3 303 aa13.53□□□□□ -0.24
SNX17-203ENST00000440760 TNFRSF18Q9Y5U5 241 aa13.53□□□□□ -0.24
SNX17-203ENST00000440760 TEX43Q6ZNM6 134 aa13.52□□□□□ -0.24
SNX17-203ENST00000440760 Q8N976 141 aa13.52□□□□□ -0.24
SNX17-203ENST00000440760 HSPB8Q9UJY1 196 aa13.52□□□□□ -0.24
SNX17-203ENST00000440760 TRGV4A0A0C4DH28 118 aa13.52□□□□□ -0.25
SNX17-203ENST00000440760 KIR2DL4Q99706 377 aa13.52□□□□□ -0.25
SNX17-203ENST00000440760 IGHV3-38A0A0C4DH36 116 aa13.51□□□□□ -0.25
SNX17-203ENST00000440760 LYRM9A8MSI8 78 aa13.51□□□□□ -0.25
SNX17-203ENST00000440760 FHL2Q14192 279 aa13.51□□□□□ -0.25
SNX17-203ENST00000440760 ORMDL2Q53FV1 153 aa13.51□□□□□ -0.25
SNX17-203ENST00000440760 PHLDA1Q8WV24 401 aaPredicted RBP13.51□□□□□ -0.25
SNX17-203ENST00000440760 LOC100131303A0A0U1RQF7 123 aa13.51□□□□□ -0.25
SNX17-203ENST00000440760 TSHBP01222 138 aa13.51□□□□□ -0.25
SNX17-203ENST00000440760 SBSPONQ8IVN8 264 aa13.51□□□□□ -0.25
SNX17-203ENST00000440760 MIEN1Q9BRT3 115 aa13.51□□□□□ -0.25
SNX17-203ENST00000440760 TP53TG1Q9Y2A0 90 aa13.5□□□□□ -0.25
SNX17-203ENST00000440760 SYS1-DBNDD2H3BUS1 97 aa13.49□□□□□ -0.25
SNX17-203ENST00000440760 I3L3M4 83 aa13.49□□□□□ -0.25
SNX17-203ENST00000440760 ZNRF2Q8NHG8 242 aa13.49□□□□□ -0.25
SNX17-203ENST00000440760 GAGE12JA6NER3 117 aa13.49□□□□□ -0.25
SNX17-203ENST00000440760 GAGE1Q13065 139 aa13.49□□□□□ -0.25
SNX17-203ENST00000440760 GAGE4Q13068 117 aa13.49□□□□□ -0.25
SNX17-203ENST00000440760 GAGE5Q13069 117 aa13.49□□□□□ -0.25
SNX17-203ENST00000440760 GAGE13Q4V321 117 aa13.49□□□□□ -0.25
SNX17-203ENST00000440760 DEFB121Q5J5C9 76 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms