RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 FAM110AQ9BQ89 295 aa11.23□□□□□ -0.61
PCNX1-202ENST00000439984 ADAMTS9Q9P2N4 1935 aa11.23□□□□□ -0.61
PCNX1-202ENST00000439984 ZNF561-AS1K7EIQ3 104 aa11.23□□□□□ -0.61
PCNX1-202ENST00000439984 ABCA4P78363 2273 aa11.22□□□□□ -0.61
PCNX1-202ENST00000439984 ENHOQ6UWT2 76 aa11.22□□□□□ -0.61
PCNX1-202ENST00000439984 C1orf229Q6ZS94 237 aaPredicted RBP11.22□□□□□ -0.61
PCNX1-202ENST00000439984 Q6ZQT7 251 aa11.22□□□□□ -0.61
PCNX1-202ENST00000439984 ZFHX2Q9C0A1 2572 aaPredicted RBP11.22□□□□□ -0.61
PCNX1-202ENST00000439984 COX7A2LO14548 114 aa11.22□□□□□ -0.61
PCNX1-202ENST00000439984 HIST2H2BCQ6DN03 193 aa11.22□□□□□ -0.61
PCNX1-202ENST00000439984 MIR7-3HGQ8N6C7 128 aa11.21□□□□□ -0.61
PCNX1-202ENST00000439984 LRRC75A-AS1Q8N1F1 130 aa11.21□□□□□ -0.61
PCNX1-202ENST00000439984 SPRY4Q9C004 299 aa11.21□□□□□ -0.61
PCNX1-202ENST00000439984 VSIG2Q96IQ7 327 aa11.21□□□□□ -0.62
PCNX1-202ENST00000439984 P0DMU3 169 aa11.21□□□□□ -0.62
PCNX1-202ENST00000439984 FAM231AP0DMU4 169 aa11.21□□□□□ -0.62
PCNX1-202ENST00000439984 FAM231CP0DMU5 169 aa11.21□□□□□ -0.62
PCNX1-202ENST00000439984 NCR3O14931 201 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 COX7CP15954 63 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 JMJD7-PLA2G4BH0Y9G9 81 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 GATA3P23771 443 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 MRPL55Q7Z7F7 128 aaKnown RBP11.2□□□□□ -0.62
PCNX1-202ENST00000439984 NKAPP1Q8N9T2 125 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 RNF185Q96GF1 192 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 IGHV1-69P01742 117 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 IGHV3-30P01768 117 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 SLPIP03973 132 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 IGHV3-30-5P0DP03 117 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 C9orf47Q6ZRZ4 202 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 LOC107984640A0A0U1RRK4 108 aa11.2□□□□□ -0.62
PCNX1-202ENST00000439984 U3KQK5 164 aa11.19□□□□□ -0.62
PCNX1-202ENST00000439984 NDUFC2-KCTD14E9PQ53 114 aa11.19□□□□□ -0.62
PCNX1-202ENST00000439984 TNCP24821 2201 aa11.19□□□□□ -0.62
PCNX1-202ENST00000439984 TRBV7-3A0A075B6L6 115 aa11.19□□□□□ -0.62
PCNX1-202ENST00000439984 GAS8-AS1O95177 125 aa11.19□□□□□ -0.62
PCNX1-202ENST00000439984 ANGP03950 147 aaKnown RBP11.19□□□□□ -0.62
PCNX1-202ENST00000439984 SNURFQ9Y675 71 aa11.19□□□□□ -0.62
PCNX1-202ENST00000439984 Q6ZS46 218 aa11.19□□□□□ -0.62
PCNX1-202ENST00000439984 PLA2G2CQ5R387 149 aa11.19□□□□□ -0.62
PCNX1-202ENST00000439984 C20orf203Q8NBC4 194 aa11.18□□□□□ -0.62
PCNX1-202ENST00000439984 TRBV30A0A0K0K1B3 111 aa11.18□□□□□ -0.62
PCNX1-202ENST00000439984 TECTAO75443 2155 aa11.18□□□□□ -0.62
PCNX1-202ENST00000439984 NREPQ16612 68 aa11.18□□□□□ -0.62
PCNX1-202ENST00000439984 KLK5Q9Y337 293 aaPredicted RBP11.18□□□□□ -0.62
PCNX1-202ENST00000439984 C1orf195Q5TG92 126 aa11.18□□□□□ -0.62
PCNX1-202ENST00000439984 SCXQ7RTU7 201 aa11.18□□□□□ -0.62
PCNX1-202ENST00000439984 SERP2Q8N6R1 65 aa11.18□□□□□ -0.62
PCNX1-202ENST00000439984 IGHV7-81A0A0B4J1V7 117 aa11.17□□□□□ -0.62
PCNX1-202ENST00000439984 FAM19A5Q7Z5A7 132 aaPredicted RBP11.17□□□□□ -0.62
PCNX1-202ENST00000439984 NOP10Q9NPE3 64 aaKnown RBP11.17□□□□□ -0.62
PCNX1-202ENST00000439984 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
PCNX1-202ENST00000439984 VPREB3Q9UKI3 123 aa11.17□□□□□ -0.62
PCNX1-202ENST00000439984 Q6ZS92 163 aa11.17□□□□□ -0.62
PCNX1-202ENST00000439984 EIF4EBP1Q13541 118 aaPredicted RBP11.17□□□□□ -0.62
PCNX1-202ENST00000439984 MDFICQ9P1T7 246 aa11.17□□□□□ -0.62
PCNX1-202ENST00000439984 FAM240AA0A1B0GVK7 77 aa11.16□□□□□ -0.62
PCNX1-202ENST00000439984 RPL18AQ02543 176 aaKnown RBP11.16□□□□□ -0.62
PCNX1-202ENST00000439984 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
PCNX1-202ENST00000439984 CENPVL3A0A0U1RRI6 287 aa11.16□□□□□ -0.62
PCNX1-202ENST00000439984 TMEM223A0PJW6 202 aa11.16□□□□□ -0.62
PCNX1-202ENST00000439984 USP17L23D6RBM5 183 aa11.16□□□□□ -0.62
PCNX1-202ENST00000439984 KAAG1Q9UBP8 84 aa11.15□□□□□ -0.62
PCNX1-202ENST00000439984 IGLV10-54A0A075B6I4 117 aa11.15□□□□□ -0.62
PCNX1-202ENST00000439984 CLPSL1A2RUU4 121 aa11.15□□□□□ -0.62
PCNX1-202ENST00000439984 ZNF22P17026 224 aaPredicted RBP11.15□□□□□ -0.63
PCNX1-202ENST00000439984 CSDC2Q9Y534 153 aaKnown RBP11.14□□□□□ -0.63
PCNX1-202ENST00000439984 H7C423 109 aa11.14□□□□□ -0.63
PCNX1-202ENST00000439984 HIST2H2BDQ6DRA6 164 aa11.14□□□□□ -0.63
PCNX1-202ENST00000439984 A8MZ25 164 aa11.14□□□□□ -0.63
PCNX1-202ENST00000439984 FANCD2OSQ96PS1 177 aa11.14□□□□□ -0.63
PCNX1-202ENST00000439984 PRR14LQ5THK1 2151 aa11.14□□□□□ -0.63
PCNX1-202ENST00000439984 IMUPQ9GZP8 106 aa11.14□□□□□ -0.63
PCNX1-202ENST00000439984 TMEM256-PLSCR3K7ERE1 68 aa11.14□□□□□ -0.63
PCNX1-202ENST00000439984 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
PCNX1-202ENST00000439984 HOXB4P17483 251 aaPredicted RBP11.13□□□□□ -0.63
PCNX1-202ENST00000439984 Q8N7P7 452 aa11.13□□□□□ -0.63
PCNX1-202ENST00000439984 NPBQ8NG41 125 aa11.13□□□□□ -0.63
PCNX1-202ENST00000439984 MYCNOSP40205 109 aa11.13□□□□□ -0.63
PCNX1-202ENST00000439984 BDP1A6H8Y1 2624 aa11.13□□□□□ -0.63
PCNX1-202ENST00000439984 APRG1Q8IVJ8 170 aa11.13□□□□□ -0.63
PCNX1-202ENST00000439984 A0A1W2PNU3 283 aaPredicted RBP11.12□□□□□ -0.63
PCNX1-202ENST00000439984 NDUFS5O43920 106 aa11.12□□□□□ -0.63
PCNX1-202ENST00000439984 IGF1P05019 195 aa11.12□□□□□ -0.63
PCNX1-202ENST00000439984 Q6Q795 121 aa11.12□□□□□ -0.63
PCNX1-202ENST00000439984 WT1P19544 449 aaPredicted RBP11.12□□□□□ -0.63
PCNX1-202ENST00000439984 PIK3CD-AS1Q5SR53 167 aa11.12□□□□□ -0.63
PCNX1-202ENST00000439984 LINC01619G3V211 115 aa11.12□□□□□ -0.63
PCNX1-202ENST00000439984 FUSP35637 526 aaKnown RBP eCLIP11.12□□□□□ -0.63
PCNX1-202ENST00000439984 CMC4P56277 68 aaPredicted RBP11.12□□□□□ -0.63
PCNX1-202ENST00000439984 HHLA3Q9XRX5 114 aa11.12□□□□□ -0.63
PCNX1-202ENST00000439984 TIMM17BO60830 172 aa11.11□□□□□ -0.63
PCNX1-202ENST00000439984 FAM215AQ9Y5M1 114 aa11.11□□□□□ -0.63
PCNX1-202ENST00000439984 B4DSR2 109 aa11.1□□□□□ -0.63
PCNX1-202ENST00000439984 TIRAPP58753 221 aa11.1□□□□□ -0.63
PCNX1-202ENST00000439984 MED14OSP0DP75 135 aa11.1□□□□□ -0.63
PCNX1-202ENST00000439984 MP68P56378 58 aa11.1□□□□□ -0.63
PCNX1-202ENST00000439984 TMEM263Q8WUH6 116 aaKnown RBP11.1□□□□□ -0.63
PCNX1-202ENST00000439984 AJUBAQ96IF1 538 aa11.1□□□□□ -0.63
PCNX1-202ENST00000439984 NUP210LQ5VU65 1888 aa11.1□□□□□ -0.63
PCNX1-202ENST00000439984 HCFC1P51610 2035 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms