RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 GIG44P09565 113 aaPredicted RBP8.54□□□□□ -1.04
SMAD3-202ENST00000439724 CFAP126Q5VTH2 177 aa8.54□□□□□ -1.04
SMAD3-202ENST00000439724 STPG4Q8N801 248 aa8.54□□□□□ -1.04
SMAD3-202ENST00000439724 FN1P02751 2386 aaKnown RBP8.53□□□□□ -1.04
SMAD3-202ENST00000439724 RS1O15537 224 aa8.53□□□□□ -1.04
SMAD3-202ENST00000439724 FGF6P10767 208 aa8.53□□□□□ -1.04
SMAD3-202ENST00000439724 AZU1P20160 251 aa8.53□□□□□ -1.04
SMAD3-202ENST00000439724 NEXN-AS1Q8NBZ9 246 aa8.53□□□□□ -1.04
SMAD3-202ENST00000439724 RNASE8Q8TDE3 154 aaKnown RBP8.53□□□□□ -1.04
SMAD3-202ENST00000439724 C1QTNF4Q9BXJ3 329 aa8.53□□□□□ -1.04
SMAD3-202ENST00000439724 WFDC10AQ9H1F0 79 aa8.53□□□□□ -1.04
SMAD3-202ENST00000439724 MRPL16Q9NX20 251 aaKnown RBP8.53□□□□□ -1.04
SMAD3-202ENST00000439724 MRPL35Q9NZE8 188 aaKnown RBP8.53□□□□□ -1.04
SMAD3-202ENST00000439724 HHLA3Q9XRX5 114 aa8.53□□□□□ -1.04
SMAD3-202ENST00000439724 A0A1B0GV90 55 aa8.52□□□□□ -1.05
SMAD3-202ENST00000439724 F8VRH5 84 aa8.52□□□□□ -1.05
SMAD3-202ENST00000439724 I3L3M4 83 aa8.52□□□□□ -1.05
SMAD3-202ENST00000439724 DLEU1O43261 78 aa8.52□□□□□ -1.05
SMAD3-202ENST00000439724 PLNP26678 52 aa8.52□□□□□ -1.05
SMAD3-202ENST00000439724 INSL3P51460 131 aa8.52□□□□□ -1.05
SMAD3-202ENST00000439724 TMEM263Q8WUH6 116 aaKnown RBP8.52□□□□□ -1.05
SMAD3-202ENST00000439724 BAALCQ8WXS3 180 aa8.52□□□□□ -1.05
SMAD3-202ENST00000439724 TP73-AS1Q9UF72 201 aa8.52□□□□□ -1.05
SMAD3-202ENST00000439724 TP53TG1Q9Y2A0 90 aa8.52□□□□□ -1.05
SMAD3-202ENST00000439724 NOTCH2Q04721 2471 aa8.52□□□□□ -1.05
SMAD3-202ENST00000439724 NF1P21359 2839 aa8.51□□□□□ -1.05
SMAD3-202ENST00000439724 IGHV3OR16-12A0A075B7B8 117 aa8.51□□□□□ -1.05
SMAD3-202ENST00000439724 IGIPA6NJ69 53 aa8.51□□□□□ -1.05
SMAD3-202ENST00000439724 TSHBP01222 138 aa8.51□□□□□ -1.05
SMAD3-202ENST00000439724 IGHV3-53P01767 116 aa8.51□□□□□ -1.05
SMAD3-202ENST00000439724 LURAP1LQ8IV03 231 aa8.51□□□□□ -1.05
SMAD3-202ENST00000439724 BOD1L2Q8IYS8 172 aa8.51□□□□□ -1.05
SMAD3-202ENST00000439724 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-202ENST00000439724 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
SMAD3-202ENST00000439724 TIMM17AQ99595 171 aa8.51□□□□□ -1.05
SMAD3-202ENST00000439724 OTOGQ6ZRI0 2925 aa8.51□□□□□ -1.05
SMAD3-202ENST00000439724 IGHV3-73A0A0B4J1V6 119 aa8.5□□□□□ -1.05
SMAD3-202ENST00000439724 RPL35AP18077 110 aaKnown RBP8.5□□□□□ -1.05
SMAD3-202ENST00000439724 BATFQ16520 125 aa8.5□□□□□ -1.05
SMAD3-202ENST00000439724 C9orf66Q5T8R8 295 aa8.5□□□□□ -1.05
SMAD3-202ENST00000439724 CITED1Q99966 193 aa8.5□□□□□ -1.05
SMAD3-202ENST00000439724 CHTOPQ9Y3Y2 248 aaKnown RBP8.5□□□□□ -1.05
SMAD3-202ENST00000439724 SETXQ7Z333 2677 aaKnown RBP8.5□□□□□ -1.05
SMAD3-202ENST00000439724 COL5A1-AS1Q5SY13 56 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 ZC2HC1BQ5TFG8 222 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 C2orf91Q6ZV80 131 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 CSNK1G2-AS1Q8NCQ2 148 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 C16orf74Q96GX8 76 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 DNAJC30Q96LL9 226 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 C2CD3Q4AC94 2353 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 P0DMU3 169 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 FAM231AP0DMU4 169 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 FAM231CP0DMU5 169 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 HINT1P49773 126 aaPredicted RBP8.49□□□□□ -1.05
SMAD3-202ENST00000439724 RPL39P62891 51 aaKnown RBP8.49□□□□□ -1.05
SMAD3-202ENST00000439724 DAZ2Q13117 558 aaKnown RBP8.49□□□□□ -1.05
SMAD3-202ENST00000439724 Q6ZSN1 163 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 C20orf203Q8NBC4 194 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 TNFRSF18Q9Y5U5 241 aa8.49□□□□□ -1.05
SMAD3-202ENST00000439724 NSD1Q96L73 2696 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-202ENST00000439724 SETD2Q9BYW2 2564 aaPredicted RBP8.48□□□□□ -1.05
SMAD3-202ENST00000439724 TRGV1A0A0A0MS02 117 aa8.48□□□□□ -1.05
SMAD3-202ENST00000439724 PRSS29PA6NIE9 313 aa8.48□□□□□ -1.05
SMAD3-202ENST00000439724 SIVA1O15304 175 aa8.48□□□□□ -1.05
SMAD3-202ENST00000439724 NMUP48645 174 aa8.48□□□□□ -1.05
SMAD3-202ENST00000439724 C12orf54Q6X4T0 127 aa8.48□□□□□ -1.05
SMAD3-202ENST00000439724 IGKV2D-26A0A0A0MRZ7 120 aa8.47□□□□□ -1.05
SMAD3-202ENST00000439724 PLAC8L1A1L4L8 177 aa8.47□□□□□ -1.05
SMAD3-202ENST00000439724 PMVKQ15126 192 aa8.47□□□□□ -1.05
SMAD3-202ENST00000439724 GTSCR1Q86UQ5 136 aa8.47□□□□□ -1.05
SMAD3-202ENST00000439724 PCP2Q8IVA1 136 aa8.47□□□□□ -1.05
SMAD3-202ENST00000439724 OR4C5Q8NGB2 326 aa8.47□□□□□ -1.05
SMAD3-202ENST00000439724 DEFB104AQ8WTQ1 72 aa8.47□□□□□ -1.05
SMAD3-202ENST00000439724 TRAV4A0A0B4J268 109 aa8.46□□□□□ -1.05
SMAD3-202ENST00000439724 TCTAP57738 103 aa8.46□□□□□ -1.05
SMAD3-202ENST00000439724 MPV17L2Q567V2 206 aa8.46□□□□□ -1.05
SMAD3-202ENST00000439724 PAPPA-AS1Q5QFB9 102 aa8.46□□□□□ -1.05
SMAD3-202ENST00000439724 SPATA3Q8NHX4 192 aa8.46□□□□□ -1.05
SMAD3-202ENST00000439724 CUBNO60494 3623 aa8.46□□□□□ -1.06
SMAD3-202ENST00000439724 RRN3P1Q2M238 152 aa8.45□□□□□ -1.06
SMAD3-202ENST00000439724 BVES-AS1Q5T3Y7 98 aa8.45□□□□□ -1.06
SMAD3-202ENST00000439724 Q6ZTI0 123 aa8.45□□□□□ -1.06
SMAD3-202ENST00000439724 OVOL2Q9BRP0 275 aa8.45□□□□□ -1.06
SMAD3-202ENST00000439724 CST9LQ9H4G1 147 aa8.45□□□□□ -1.06
SMAD3-202ENST00000439724 IGLV4-69A0A075B6H9 119 aa8.44□□□□□ -1.06
SMAD3-202ENST00000439724 ZNF479Q96JC4 524 aa8.44□□□□□ -1.06
SMAD3-202ENST00000439724 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
SMAD3-202ENST00000439724 Q9UF83 564 aa8.44□□□□□ -1.06
SMAD3-202ENST00000439724 PYGO1Q9Y3Y4 419 aa8.44□□□□□ -1.06
SMAD3-202ENST00000439724 HIVEP1P15822 2718 aa8.44□□□□□ -1.06
SMAD3-202ENST00000439724 TRBV10-1A0A0K0K1A3 114 aa8.44□□□□□ -1.06
SMAD3-202ENST00000439724 CIDEAO60543 219 aa8.44□□□□□ -1.06
SMAD3-202ENST00000439724 NPSP0C0P6 89 aa8.44□□□□□ -1.06
SMAD3-202ENST00000439724 TMEM97Q5BJF2 176 aa8.44□□□□□ -1.06
SMAD3-202ENST00000439724 HIGD1BQ9P298 99 aa8.44□□□□□ -1.06
SMAD3-202ENST00000439724 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
SMAD3-202ENST00000439724 K7EQD1 137 aa8.43□□□□□ -1.06
SMAD3-202ENST00000439724 CRYBA4P53673 196 aa8.43□□□□□ -1.06
SMAD3-202ENST00000439724 HSD52Q0P140 79 aa8.43□□□□□ -1.06
SMAD3-202ENST00000439724 WFDC9Q8NEX5 89 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms