RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 C4orf3Q8WVX3 66 aa8.93□□□□□ -0.98
HDAC8-214ENST00000439122 NF1P21359 2839 aa8.93□□□□□ -0.98
HDAC8-214ENST00000439122 CHD6Q8TD26 2715 aa8.93□□□□□ -0.98
HDAC8-214ENST00000439122 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
HDAC8-214ENST00000439122 RIPPLY3P57055 190 aa8.93□□□□□ -0.98
HDAC8-214ENST00000439122 RNF151Q2KHN1 245 aa8.93□□□□□ -0.98
HDAC8-214ENST00000439122 KLHL30-AS1Q8NEE0 82 aa8.93□□□□□ -0.98
HDAC8-214ENST00000439122 TIMM17AQ99595 171 aa8.93□□□□□ -0.98
HDAC8-214ENST00000439122 ZNF815PA8K554 130 aa8.92□□□□□ -0.98
HDAC8-214ENST00000439122 H3BMM0 161 aa8.92□□□□□ -0.98
HDAC8-214ENST00000439122 OCIAD2Q56VL3 154 aa8.92□□□□□ -0.98
HDAC8-214ENST00000439122 KRTAP1-3Q8IUG1 177 aa8.92□□□□□ -0.98
HDAC8-214ENST00000439122 DYNLRB2Q8TF09 96 aa8.92□□□□□ -0.98
HDAC8-214ENST00000439122 PHLDA1Q8WV24 401 aaPredicted RBP8.92□□□□□ -0.98
HDAC8-214ENST00000439122 DLX4Q92988 240 aaPredicted RBP8.92□□□□□ -0.98
HDAC8-214ENST00000439122 IGHV3-73A0A0B4J1V6 119 aa8.92□□□□□ -0.98
HDAC8-214ENST00000439122 PRM2P04554 102 aa8.92□□□□□ -0.98
HDAC8-214ENST00000439122 PAPPA-AS1Q5QFB9 102 aa8.91□□□□□ -0.98
HDAC8-214ENST00000439122 SCGB1D4Q6XE38 83 aa8.91□□□□□ -0.98
HDAC8-214ENST00000439122 TRBV7-3A0A075B6L6 115 aa8.91□□□□□ -0.98
HDAC8-214ENST00000439122 RBMY1BA6NDE4 496 aaKnown RBP8.91□□□□□ -0.98
HDAC8-214ENST00000439122 RBMY1EA6NEQ0 496 aaKnown RBP8.91□□□□□ -0.98
HDAC8-214ENST00000439122 RBMY1DP0C7P1 496 aaKnown RBP8.91□□□□□ -0.98
HDAC8-214ENST00000439122 FLNAP21333 2647 aaKnown RBP8.9□□□□□ -0.98
HDAC8-214ENST00000439122 WNK1Q9H4A3 2382 aa8.9□□□□□ -0.98
HDAC8-214ENST00000439122 I3L3M4 83 aa8.9□□□□□ -0.98
HDAC8-214ENST00000439122 HERVK_113P61574 105 aa8.9□□□□□ -0.98
HDAC8-214ENST00000439122 RHOHQ15669 191 aa8.9□□□□□ -0.98
HDAC8-214ENST00000439122 C12orf74Q32Q52 190 aa8.9□□□□□ -0.98
HDAC8-214ENST00000439122 NSUN5P1Q3KNT7 163 aa8.9□□□□□ -0.98
HDAC8-214ENST00000439122 TMEM170BQ5T4T1 132 aa8.9□□□□□ -0.98
HDAC8-214ENST00000439122 WFDC11Q8NEX6 87 aa8.89□□□□□ -0.99
HDAC8-214ENST00000439122 OR5A1Q8NGJ0 315 aa8.89□□□□□ -0.99
HDAC8-214ENST00000439122 OPRPNQ99935 248 aaPredicted RBP8.89□□□□□ -0.99
HDAC8-214ENST00000439122 MAP6D1Q9H9H5 199 aa8.89□□□□□ -0.99
HDAC8-214ENST00000439122 TRAV2A0A0B4J234 112 aa8.89□□□□□ -0.99
HDAC8-214ENST00000439122 P0DMU3 169 aa8.89□□□□□ -0.99
HDAC8-214ENST00000439122 FAM231AP0DMU4 169 aa8.89□□□□□ -0.99
HDAC8-214ENST00000439122 FAM231CP0DMU5 169 aa8.89□□□□□ -0.99
HDAC8-214ENST00000439122 C11orf44Q8N8P7 122 aa8.89□□□□□ -0.99
HDAC8-214ENST00000439122 ZNRF2Q8NHG8 242 aa8.89□□□□□ -0.99
HDAC8-214ENST00000439122 SETD2Q9BYW2 2564 aaPredicted RBP8.88□□□□□ -0.99
HDAC8-214ENST00000439122 PROK1P58294 105 aa8.88□□□□□ -0.99
HDAC8-214ENST00000439122 DEFB114Q30KQ6 69 aa8.88□□□□□ -0.99
HDAC8-214ENST00000439122 Q6ZSV7 163 aa8.88□□□□□ -0.99
HDAC8-214ENST00000439122 PLEKHB2Q96CS7 222 aa8.88□□□□□ -0.99
HDAC8-214ENST00000439122 A8MTW9 85 aa8.88□□□□□ -0.99
HDAC8-214ENST00000439122 C20orf203Q8NBC4 194 aa8.88□□□□□ -0.99
HDAC8-214ENST00000439122 IGLL5B9A064 214 aa8.87□□□□□ -0.99
HDAC8-214ENST00000439122 M0R2P5 195 aa8.87□□□□□ -0.99
HDAC8-214ENST00000439122 SRSF9Q13242 221 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDAC8-214ENST00000439122 TMEM86BQ8N661 226 aa8.87□□□□□ -0.99
HDAC8-214ENST00000439122 LINC01587Q99440 93 aa8.87□□□□□ -0.99
HDAC8-214ENST00000439122 TENM4Q6N022 2769 aa8.87□□□□□ -0.99
HDAC8-214ENST00000439122 A0A1W2PRX2 142 aa8.87□□□□□ -0.99
HDAC8-214ENST00000439122 DNAJC9-AS1A6NH13 148 aa8.87□□□□□ -0.99
HDAC8-214ENST00000439122 K7ERU9 68 aa8.87□□□□□ -0.99
HDAC8-214ENST00000439122 RAX2Q96IS3 184 aa8.87□□□□□ -0.99
HDAC8-214ENST00000439122 ZNF479Q96JC4 524 aa8.87□□□□□ -0.99
HDAC8-214ENST00000439122 A8MWV9 139 aa8.86□□□□□ -0.99
HDAC8-214ENST00000439122 ZNF415Q09FC8 603 aa8.86□□□□□ -0.99
HDAC8-214ENST00000439122 SAP30O75446 220 aa8.86□□□□□ -0.99
HDAC8-214ENST00000439122 HIST2H2BCQ6DN03 193 aa8.86□□□□□ -0.99
HDAC8-214ENST00000439122 SPAG8Q99932 426 aaPredicted RBP8.86□□□□□ -0.99
HDAC8-214ENST00000439122 VPS25Q9BRG1 176 aa8.86□□□□□ -0.99
HDAC8-214ENST00000439122 TNFRSF18Q9Y5U5 241 aa8.86□□□□□ -0.99
HDAC8-214ENST00000439122 TSPEAR-AS2P59090 65 aa8.85□□□□□ -0.99
HDAC8-214ENST00000439122 INSP01308 110 aa8.85□□□□□ -0.99
HDAC8-214ENST00000439122 TEX29Q8N6K0 151 aa8.85□□□□□ -0.99
HDAC8-214ENST00000439122 VCX2Q9H322 139 aa8.85□□□□□ -0.99
HDAC8-214ENST00000439122 NACAE9PAV3 2078 aa8.84□□□□□ -0.99
HDAC8-214ENST00000439122 CD28P10747 220 aa8.84□□□□□ -0.99
HDAC8-214ENST00000439122 NFE4Q86UQ8 179 aa8.84□□□□□ -0.99
HDAC8-214ENST00000439122 EDA2RQ9HAV5 297 aa8.84□□□□□ -0.99
HDAC8-214ENST00000439122 Q9UF83 564 aa8.84□□□□□ -0.99
HDAC8-214ENST00000439122 ACANP16112 2415 aa8.84□□□□□ -0.99
HDAC8-214ENST00000439122 IGLV4-3A0A075B6K6 122 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 A0A0J9YY99 117 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 TMEM238LA0A1B0GVL6 79 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 A0A1B0GWB2 263 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 A6NJY4 79 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 RRN3P1Q2M238 152 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 CFAP126Q5VTH2 177 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 Q6ZSN1 163 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 ESM1Q9NQ30 184 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 XCL2Q9UBD3 114 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 NIPBLQ6KC79 2804 aaeCLIP8.83□□□□□ -1
HDAC8-214ENST00000439122 J3QQQ9 107 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 LGALS3P17931 250 aaKnown RBP8.83□□□□□ -1
HDAC8-214ENST00000439122 PCP4P48539 62 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 C11orf72Q8NBR9 251 aa8.83□□□□□ -1
HDAC8-214ENST00000439122 MRPL16Q9NX20 251 aaKnown RBP8.83□□□□□ -1
HDAC8-214ENST00000439122 IGHV3-64A0A075B6Q5 118 aa8.82□□□□□ -1
HDAC8-214ENST00000439122 CCL24O00175 119 aa8.82□□□□□ -1
HDAC8-214ENST00000439122 ODF3L2Q3SX64 289 aa8.82□□□□□ -1
HDAC8-214ENST00000439122 NOTCH3Q9UM47 2321 aa8.82□□□□□ -1
HDAC8-214ENST00000439122 IGHV3OR16-12A0A075B7B8 117 aa8.82□□□□□ -1
HDAC8-214ENST00000439122 A0A0J9YXV3 536 aa8.82□□□□□ -1
HDAC8-214ENST00000439122 PIK3CD-AS1Q5SR53 167 aa8.82□□□□□ -1
HDAC8-214ENST00000439122 CEMP1Q6PRD7 247 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms