RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CASC2Q6XLA1 102 aa2.22□□□□□ -2.05
HMGB1P12-201ENST00000438594 OR8B3Q8NGG8 313 aa2.22□□□□□ -2.05
HMGB1P12-201ENST00000438594 TRGV9Q99603 122 aa2.22□□□□□ -2.05
HMGB1P12-201ENST00000438594 NDUFB11Q9NX14 153 aa2.22□□□□□ -2.05
HMGB1P12-201ENST00000438594 A0A1B0GUL6 1792 aa2.22□□□□□ -2.05
HMGB1P12-201ENST00000438594 COL5A3P25940 1745 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P12-201ENST00000438594 HEATR5AQ86XA9 2040 aa2.22□□□□□ -2.05
HMGB1P12-201ENST00000438594 USP24Q9UPU5 2620 aa2.21□□□□□ -2.05
HMGB1P12-201ENST00000438594 C1orf167Q5SNV9 1468 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 ANKRD36CQ5JPF3 1778 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 BCORQ6W2J9 1755 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 GREB1Q4ZG55 1949 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 IGHV3-64A0A075B6Q5 118 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 TRAV2A0A0B4J234 112 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 PIGBOS1A0A0B4J2F0 54 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 MUC21A0A140T8X8 626 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 IGKV3-11P04433 115 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 BAALC-AS2P0C853 105 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 COL24A1Q17RW2 1714 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 DEFB113Q30KQ7 82 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 SPATA45Q537H7 98 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 C9orf116Q5BN46 136 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 SPANXN5Q5MJ07 72 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 KPRPQ5T749 579 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 SLC48A1Q6P1K1 146 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 SCN7AQ01118 1682 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 SRCAPQ6ZRS2 3230 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 MYH8P13535 1937 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 RGPD5Q99666 1765 aa2.21□□□□□ -2.06
HMGB1P12-201ENST00000438594 PLXNA4Q9HCM2 1894 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 TIAM2Q8IVF5 1701 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 NWD2Q9ULI1 1742 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 SNRNP200O75643 2136 aaKnown RBP2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 LAMA4Q16363 1823 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 DOCK2Q92608 1830 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 IGLV2-18A0A075B6J9 118 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 IGHV3OR16-8A0A075B7F1 116 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 IGKV3D-11A0A0A0MRZ8 115 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 NAP1L6A6NFF2 107 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 ODF3BA8MYP8 253 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 HCG22E2RYF7 251 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 H3BUT2 72 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 CISD3P0C7P0 127 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 PRB4P10163 310 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 MIFP14174 115 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 MIR22HGQ0VDD5 57 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 MPV17LQ2QL34 196 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 SPTSSBQ8NFR3 76 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 Q8TAT8 98 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 C18orf32Q8TCD1 76 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 ODF3Q96PU9 254 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 NXT2Q9NPJ8 142 aaKnown RBP2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 HIGD1BQ9P298 99 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 KLK12Q9UKR0 248 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 SCN1AP35498 2009 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 DOCK1Q14185 1865 aa2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 DDX60LQ5H9U9 1706 aaKnown RBP2.2□□□□□ -2.06
HMGB1P12-201ENST00000438594 MALRD1Q5VYJ5 2156 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 COL14A1Q05707 1796 aaKnown RBP2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 SLIT2O94813 1529 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 TRAV13-2A0A0B4J235 113 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 TRAV10A0A0B4J240 114 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 CRYM-AS1A6NIL9 109 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 NDUFC1O43677 76 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 ASAH2BP0C7U1 165 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 ZNF791Q3KP31 576 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 RPL7L1Q6DKI1 246 aaKnown RBP2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 LINC00612Q8N6U2 182 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 LINC01600Q96MT4 127 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 S4R3C0 116 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 LCTP09848 1927 aa2.19□□□□□ -2.06
HMGB1P12-201ENST00000438594 NHSQ6T4R5 1651 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 RGPD4Q7Z3J3 1758 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 THADAQ6YHU6 1953 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 LRRC37AA6NMS7 1700 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 IGLV4-69A0A075B6H9 119 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 A0A0J9YX75 114 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 TCRBV4S1A1TA0A5B7 111 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 A6NIN4 97 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 H7BZZ5 65 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 ERC2-IT1O76042 136 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 KRTAP26-1Q6PEX3 210 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 C9orf163Q8N9P6 203 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 CMTM2Q8TAZ6 248 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 TMEM254Q8TBM7 123 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 CYP4F30PQ9H0H9 118 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 CDC42SE1Q9NRR8 79 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 MGAMO43451 1857 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 KIAA1549Q9HCM3 1950 aa2.18□□□□□ -2.06
HMGB1P12-201ENST00000438594 C4AP0C0L4 1744 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 C4BP0C0L5 1744 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 DOT1LQ8TEK3 1739 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 PTPRFP10586 1907 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 TRANK1O15050 2925 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 TRBV10-3A0A0K0K1G6 114 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 CXorf51AA0A1B0GTR3 108 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 SIX6O95475 246 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 TFF1P04155 84 aa2.17□□□□□ -2.06
HMGB1P12-201ENST00000438594 EFNA4P52798 201 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms