RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 DEFB131BA0A096LNP1 70 aa12.47□□□□□ -0.41
CCDC144A-209ENST00000436374 D6R8Y8 96 aa12.47□□□□□ -0.41
CCDC144A-209ENST00000436374 PAX4O43316 350 aa12.47□□□□□ -0.41
CCDC144A-209ENST00000436374 RPL36AP83881 106 aaKnown RBP12.47□□□□□ -0.41
CCDC144A-209ENST00000436374 RPL36ALQ969Q0 106 aaKnown RBP12.47□□□□□ -0.41
CCDC144A-209ENST00000436374 PRELID3AQ96N28 172 aa12.47□□□□□ -0.41
CCDC144A-209ENST00000436374 TNFRSF18Q9Y5U5 241 aa12.47□□□□□ -0.41
CCDC144A-209ENST00000436374 TRBV6-5A0A0K0K1A5 114 aa12.46□□□□□ -0.41
CCDC144A-209ENST00000436374 TCAPO15273 167 aa12.46□□□□□ -0.41
CCDC144A-209ENST00000436374 CRYBA4P53673 196 aa12.46□□□□□ -0.41
CCDC144A-209ENST00000436374 OR10J3Q5JRS4 329 aa12.46□□□□□ -0.41
CCDC144A-209ENST00000436374 SLC25A29Q8N8R3 303 aa12.46□□□□□ -0.41
CCDC144A-209ENST00000436374 C1orf196B1AJZ1 125 aa12.45□□□□□ -0.42
CCDC144A-209ENST00000436374 TRGC2P03986 189 aa12.45□□□□□ -0.42
CCDC144A-209ENST00000436374 HTN3P15516 51 aa12.45□□□□□ -0.42
CCDC144A-209ENST00000436374 ST20Q9HBF5 79 aa12.45□□□□□ -0.42
CCDC144A-209ENST00000436374 TRBV7-3A0A075B6L6 115 aa12.44□□□□□ -0.42
CCDC144A-209ENST00000436374 HOXA5P20719 270 aa12.44□□□□□ -0.42
CCDC144A-209ENST00000436374 RPL32P62910 135 aaKnown RBP12.44□□□□□ -0.42
CCDC144A-209ENST00000436374 ALKBH7Q9BT30 221 aaPredicted RBP12.44□□□□□ -0.42
CCDC144A-209ENST00000436374 MAP1LC3AQ9H492 121 aa12.44□□□□□ -0.42
CCDC144A-209ENST00000436374 PLECQ15149 4684 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-209ENST00000436374 TRAV26-2A0A0B4J265 109 aa12.43□□□□□ -0.42
CCDC144A-209ENST00000436374 LCE6AA0A183 80 aa12.43□□□□□ -0.42
CCDC144A-209ENST00000436374 NUPR2A6NF83 97 aa12.43□□□□□ -0.42
CCDC144A-209ENST00000436374 TNFRSF6BO95407 300 aa12.43□□□□□ -0.42
CCDC144A-209ENST00000436374 TMEM97Q5BJF2 176 aa12.43□□□□□ -0.42
CCDC144A-209ENST00000436374 DAZ4Q86SG3 579 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-209ENST00000436374 C15orf53Q8NAA6 179 aa12.43□□□□□ -0.42
CCDC144A-209ENST00000436374 DAZ3Q9NR90 486 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-209ENST00000436374 HYDINQ4G0P3 5121 aa12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 TRAV26-1A0A087WT03 109 aa12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 PRSS47A8MTI9 375 aa12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 K7EMI3 77 aa12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 SRIP30626 198 aa12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 RAB5BP61020 215 aa12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 SUMO2P61956 95 aaKnown RBP12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 MRPL23Q16540 153 aaKnown RBP12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 PHLDA1Q8WV24 401 aaPredicted RBP12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 KLK5Q9Y337 293 aaPredicted RBP12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 ICOSQ9Y6W8 199 aa12.42□□□□□ -0.42
CCDC144A-209ENST00000436374 VCYO14598 125 aa12.41□□□□□ -0.42
CCDC144A-209ENST00000436374 NCR2O95944 276 aa12.41□□□□□ -0.42
CCDC144A-209ENST00000436374 PMCHP20382 165 aa12.41□□□□□ -0.42
CCDC144A-209ENST00000436374 TCTAP57738 103 aa12.41□□□□□ -0.42
CCDC144A-209ENST00000436374 KIAA1644Q3SXP7 199 aa12.41□□□□□ -0.42
CCDC144A-209ENST00000436374 Q6ZSN1 163 aa12.41□□□□□ -0.42
CCDC144A-209ENST00000436374 NRACQ8N912 160 aa12.41□□□□□ -0.42
CCDC144A-209ENST00000436374 NXT2Q9NPJ8 142 aaKnown RBP12.41□□□□□ -0.42
CCDC144A-209ENST00000436374 GYPEP15421 78 aa12.4□□□□□ -0.42
CCDC144A-209ENST00000436374 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.42
CCDC144A-209ENST00000436374 KIR2DL4Q99706 377 aa12.4□□□□□ -0.42
CCDC144A-209ENST00000436374 SDHAF1A6NFY7 115 aa12.39□□□□□ -0.43
CCDC144A-209ENST00000436374 SMKR1H3BMG3 65 aa12.39□□□□□ -0.43
CCDC144A-209ENST00000436374 G0S2P27469 103 aa12.39□□□□□ -0.43
CCDC144A-209ENST00000436374 ZNRF2Q8NHG8 242 aa12.39□□□□□ -0.43
CCDC144A-209ENST00000436374 I3L3M4 83 aa12.38□□□□□ -0.43
CCDC144A-209ENST00000436374 NPYP01303 97 aa12.38□□□□□ -0.43
CCDC144A-209ENST00000436374 RPL39LQ96EH5 51 aaKnown RBP12.38□□□□□ -0.43
CCDC144A-209ENST00000436374 VSIG2Q96IQ7 327 aa12.38□□□□□ -0.43
CCDC144A-209ENST00000436374 ALMS1Q8TCU4 4167 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 EPPK1P58107 5090 aaKnown RBP12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 A0A0J9YY99 117 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 GAGE12JA6NER3 117 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 UBE2D3P61077 147 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 UBE2D2P62837 147 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 Q0VG73 95 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 GAGE1Q13065 139 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 GAGE4Q13068 117 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 GAGE5Q13069 117 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 CEMP1Q6PRD7 247 aaPredicted RBP12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 PRSS3P2Q8NHM4 247 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 TMEM70Q9BUB7 260 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
CCDC144A-209ENST00000436374 POLR2KP53803 58 aaKnown RBP12.36□□□□□ -0.43
CCDC144A-209ENST00000436374 NEGR1Q7Z3B1 354 aa12.36□□□□□ -0.43
CCDC144A-209ENST00000436374 Q8N8P6 123 aa12.36□□□□□ -0.43
CCDC144A-209ENST00000436374 ATP6V0E2Q8NHE4 81 aa12.36□□□□□ -0.43
CCDC144A-209ENST00000436374 LINC01549A6NIU2 74 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 P0DMU3 169 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 FAM231AP0DMU4 169 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 FAM231CP0DMU5 169 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 LINC00694P0DN24 101 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 FCER1GP30273 86 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 TIRAPP58753 221 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 COTL1Q14019 142 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 FA2HQ7L5A8 372 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 BAGE3Q86Y29 109 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 C18orf32Q8TCD1 76 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 GTSF1LQ9H1H1 148 aa12.35□□□□□ -0.43
CCDC144A-209ENST00000436374 ORMDL2Q53FV1 153 aa12.34□□□□□ -0.43
CCDC144A-209ENST00000436374 CHCHD1Q96BP2 118 aaKnown RBP12.34□□□□□ -0.43
CCDC144A-209ENST00000436374 IGLL5B9A064 214 aa12.33□□□□□ -0.44
CCDC144A-209ENST00000436374 HIST1H2BKO60814 126 aa12.33□□□□□ -0.44
CCDC144A-209ENST00000436374 HIST1H2BJP06899 126 aa12.33□□□□□ -0.44
CCDC144A-209ENST00000436374 HIST1H2BOP23527 126 aa12.33□□□□□ -0.44
CCDC144A-209ENST00000436374 HIST1H2BBP33778 126 aa12.33□□□□□ -0.44
CCDC144A-209ENST00000436374 HIST1H2BDP58876 126 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms