RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 TRBV25-1A0A075B6N4 114 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 A0A1W2PRX2 142 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 A8MWV9 139 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 M0R2P5 195 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 C11orf44Q8N8P7 122 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
LIMK1-203ENST00000435201 CCDC168Q8NDH2 2452 aa12.24□□□□□ -0.45
LIMK1-203ENST00000435201 TSHBP01222 138 aa12.24□□□□□ -0.45
LIMK1-203ENST00000435201 PAPPA-AS1Q5QFB9 102 aa12.24□□□□□ -0.45
LIMK1-203ENST00000435201 LINC01006Q8NI28 216 aa12.24□□□□□ -0.45
LIMK1-203ENST00000435201 SONP18583 2426 aaKnown RBP12.24□□□□□ -0.45
LIMK1-203ENST00000435201 OR11H12B2RN74 326 aa12.23□□□□□ -0.45
LIMK1-203ENST00000435201 H3BRM9 83 aa12.23□□□□□ -0.45
LIMK1-203ENST00000435201 I3L3M4 83 aa12.23□□□□□ -0.45
LIMK1-203ENST00000435201 CCL25O15444 150 aa12.23□□□□□ -0.45
LIMK1-203ENST00000435201 PMVKQ15126 192 aa12.23□□□□□ -0.45
LIMK1-203ENST00000435201 ODF3L2Q3SX64 289 aa12.23□□□□□ -0.45
LIMK1-203ENST00000435201 OR11H2Q8NH07 326 aa12.23□□□□□ -0.45
LIMK1-203ENST00000435201 LINC01587Q99440 93 aa12.23□□□□□ -0.45
LIMK1-203ENST00000435201 CITED2Q99967 270 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-203ENST00000435201 ANK3Q12955 4377 aaKnown RBP12.23□□□□□ -0.45
LIMK1-203ENST00000435201 TRAV8-6A0A0B4J262 113 aa12.23□□□□□ -0.45
LIMK1-203ENST00000435201 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
LIMK1-203ENST00000435201 ZNF418Q8TF45 676 aaPredicted RBP12.22□□□□□ -0.45
LIMK1-203ENST00000435201 E9PLD3 99 aa12.21□□□□□ -0.45
LIMK1-203ENST00000435201 SPXQ9BT56 116 aa12.21□□□□□ -0.45
LIMK1-203ENST00000435201 TAL2Q16559 108 aa12.21□□□□□ -0.46
LIMK1-203ENST00000435201 STHQ8IWL8 128 aa12.21□□□□□ -0.46
LIMK1-203ENST00000435201 MAPKAPK5-AS1Q8N8E1 139 aa12.21□□□□□ -0.46
LIMK1-203ENST00000435201 UFSP1Q6NVU6 142 aa12.2□□□□□ -0.46
LIMK1-203ENST00000435201 C11orf72Q8NBR9 251 aa12.2□□□□□ -0.46
LIMK1-203ENST00000435201 CST9LQ9H4G1 147 aa12.2□□□□□ -0.46
LIMK1-203ENST00000435201 IGLV4-69A0A075B6H9 119 aa12.19□□□□□ -0.46
LIMK1-203ENST00000435201 C9orf118A6NHY6 69 aa12.19□□□□□ -0.46
LIMK1-203ENST00000435201 RHODO00212 210 aa12.19□□□□□ -0.46
LIMK1-203ENST00000435201 GCSHP23434 173 aa12.19□□□□□ -0.46
LIMK1-203ENST00000435201 CMC4P56277 68 aaPredicted RBP12.19□□□□□ -0.46
LIMK1-203ENST00000435201 HILS1P60008 231 aa12.19□□□□□ -0.46
LIMK1-203ENST00000435201 C20orf203Q8NBC4 194 aa12.19□□□□□ -0.46
LIMK1-203ENST00000435201 DEFB104AQ8WTQ1 72 aa12.19□□□□□ -0.46
LIMK1-203ENST00000435201 MYMXA0A1B0GTQ4 84 aa12.19□□□□□ -0.46
LIMK1-203ENST00000435201 TM2D2Q9BX73 214 aa12.19□□□□□ -0.46
LIMK1-203ENST00000435201 HERVK_113P61574 105 aa12.18□□□□□ -0.46
LIMK1-203ENST00000435201 AMMECR1LQ6DCA0 310 aa12.18□□□□□ -0.46
LIMK1-203ENST00000435201 CEND1Q8N111 149 aa12.18□□□□□ -0.46
LIMK1-203ENST00000435201 OR4C5Q8NGB2 326 aa12.18□□□□□ -0.46
LIMK1-203ENST00000435201 PRADC1Q9BSG0 188 aa12.18□□□□□ -0.46
LIMK1-203ENST00000435201 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
LIMK1-203ENST00000435201 C11orf86A6NJI1 115 aa12.17□□□□□ -0.46
LIMK1-203ENST00000435201 NDUFA7O95182 113 aa12.17□□□□□ -0.46
LIMK1-203ENST00000435201 P0DMU3 169 aa12.17□□□□□ -0.46
LIMK1-203ENST00000435201 FAM231AP0DMU4 169 aa12.17□□□□□ -0.46
LIMK1-203ENST00000435201 FAM231CP0DMU5 169 aa12.17□□□□□ -0.46
LIMK1-203ENST00000435201 BEAN1Q3B7T3 259 aa12.17□□□□□ -0.46
LIMK1-203ENST00000435201 CFAP126Q5VTH2 177 aa12.17□□□□□ -0.46
LIMK1-203ENST00000435201 PRM2P04554 102 aa12.17□□□□□ -0.46
LIMK1-203ENST00000435201 TNFRSF18Q9Y5U5 241 aa12.17□□□□□ -0.46
LIMK1-203ENST00000435201 SMIM13P0DJ93 91 aa12.16□□□□□ -0.46
LIMK1-203ENST00000435201 FXYD2P54710 66 aa12.16□□□□□ -0.46
LIMK1-203ENST00000435201 XCL2Q9UBD3 114 aa12.16□□□□□ -0.46
LIMK1-203ENST00000435201 RS1O15537 224 aa12.14□□□□□ -0.47
LIMK1-203ENST00000435201 SAP30O75446 220 aa12.14□□□□□ -0.47
LIMK1-203ENST00000435201 PROK1P58294 105 aa12.14□□□□□ -0.47
LIMK1-203ENST00000435201 DNAJC30Q96LL9 226 aa12.14□□□□□ -0.47
LIMK1-203ENST00000435201 NACAE9PAV3 2078 aa12.14□□□□□ -0.47
LIMK1-203ENST00000435201 NFE4Q86UQ8 179 aa12.14□□□□□ -0.47
LIMK1-203ENST00000435201 HELZ2Q9BYK8 2649 aaKnown RBP12.14□□□□□ -0.47
LIMK1-203ENST00000435201 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
LIMK1-203ENST00000435201 UNC79Q9P2D8 2635 aa12.13□□□□□ -0.47
LIMK1-203ENST00000435201 IGHV3-53P01767 116 aa12.13□□□□□ -0.47
LIMK1-203ENST00000435201 C1orf158Q8N1D5 194 aa12.13□□□□□ -0.47
LIMK1-203ENST00000435201 HIST1H4GQ99525 98 aa12.13□□□□□ -0.47
LIMK1-203ENST00000435201 PYGO1Q9Y3Y4 419 aa12.13□□□□□ -0.47
LIMK1-203ENST00000435201 ITPR2Q14571 2701 aa12.13□□□□□ -0.47
LIMK1-203ENST00000435201 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
LIMK1-203ENST00000435201 H3BUT2 72 aa12.12□□□□□ -0.47
LIMK1-203ENST00000435201 EMP1P54849 157 aa12.12□□□□□ -0.47
LIMK1-203ENST00000435201 IL17DQ8TAD2 202 aa12.12□□□□□ -0.47
LIMK1-203ENST00000435201 RAB37Q96AX2 223 aa12.12□□□□□ -0.47
LIMK1-203ENST00000435201 FAM110AQ9BQ89 295 aa12.12□□□□□ -0.47
LIMK1-203ENST00000435201 IGLV1-51P01701 117 aa12.12□□□□□ -0.47
LIMK1-203ENST00000435201 GTF2H5Q6ZYL4 71 aa12.12□□□□□ -0.47
LIMK1-203ENST00000435201 ZNRF2Q8NHG8 242 aa12.12□□□□□ -0.47
LIMK1-203ENST00000435201 NF1P21359 2839 aa12.11□□□□□ -0.47
LIMK1-203ENST00000435201 IGLV4-3A0A075B6K6 122 aa12.11□□□□□ -0.47
LIMK1-203ENST00000435201 TRBV7-3A0A075B6L6 115 aa12.11□□□□□ -0.47
LIMK1-203ENST00000435201 K7EP13 123 aa12.11□□□□□ -0.47
LIMK1-203ENST00000435201 TMEM170BQ5T4T1 132 aa12.11□□□□□ -0.47
LIMK1-203ENST00000435201 Q6ZSN1 163 aa12.11□□□□□ -0.47
LIMK1-203ENST00000435201 ACANP16112 2415 aa12.11□□□□□ -0.47
LIMK1-203ENST00000435201 CUBNO60494 3623 aa12.1□□□□□ -0.47
LIMK1-203ENST00000435201 GAGE10A6NGK3 116 aa12.1□□□□□ -0.47
LIMK1-203ENST00000435201 ADARB2-AS1A8MUL3 147 aa12.1□□□□□ -0.47
LIMK1-203ENST00000435201 AZU1P20160 251 aa12.1□□□□□ -0.47
LIMK1-203ENST00000435201 CRYBA4P53673 196 aa12.1□□□□□ -0.47
LIMK1-203ENST00000435201 VCX2Q9H322 139 aa12.1□□□□□ -0.47
LIMK1-203ENST00000435201 OPRPNQ99935 248 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-203ENST00000435201 NHP2Q9NX24 153 aaKnown RBP12.1□□□□□ -0.47
LIMK1-203ENST00000435201 WNK1Q9H4A3 2382 aa12.09□□□□□ -0.47
LIMK1-203ENST00000435201 IGHV3OR16-12A0A075B7B8 117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms