RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TNFRSF18Q9Y5U5 241 aa7.65□□□□□ -1.18
CD44-210ENST00000434472 PRRC2AP48634 2157 aaKnown RBP7.65□□□□□ -1.18
CD44-210ENST00000434472 SPG11Q96JI7 2443 aa7.65□□□□□ -1.19
CD44-210ENST00000434472 IGSF10Q6WRI0 2623 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 INSP01308 110 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 PCP4P48539 62 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 DEFB114Q30KQ6 69 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 KHDC1LQ5JSQ8 128 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 KLHL30-AS1Q8NEE0 82 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 ZNRF2Q8NHG8 242 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 DLX4Q92988 240 aaPredicted RBP7.64□□□□□ -1.19
CD44-210ENST00000434472 PLEKHB2Q96CS7 222 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 DNAJC30Q96LL9 226 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 VCX2Q9H322 139 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 USP9XQ93008 2570 aaPredicted RBP7.64□□□□□ -1.19
CD44-210ENST00000434472 CR1P17927 2039 aa7.64□□□□□ -1.19
CD44-210ENST00000434472 ASH1LQ9NR48 2969 aaKnown RBP7.64□□□□□ -1.19
CD44-210ENST00000434472 A0A0J9YY99 117 aa7.63□□□□□ -1.19
CD44-210ENST00000434472 TMEM223A0PJW6 202 aa7.63□□□□□ -1.19
CD44-210ENST00000434472 RBMY1BA6NDE4 496 aaKnown RBP7.63□□□□□ -1.19
CD44-210ENST00000434472 RBMY1EA6NEQ0 496 aaKnown RBP7.63□□□□□ -1.19
CD44-210ENST00000434472 G3V4G9 280 aa7.63□□□□□ -1.19
CD44-210ENST00000434472 J3QQQ9 107 aa7.63□□□□□ -1.19
CD44-210ENST00000434472 RBMY1DP0C7P1 496 aaKnown RBP7.63□□□□□ -1.19
CD44-210ENST00000434472 LYRM7Q5U5X0 104 aa7.63□□□□□ -1.19
CD44-210ENST00000434472 IGLV4-3A0A075B6K6 122 aa7.63□□□□□ -1.19
CD44-210ENST00000434472 UBE2D1P51668 147 aa7.63□□□□□ -1.19
CD44-210ENST00000434472 EMP1P54849 157 aa7.63□□□□□ -1.19
CD44-210ENST00000434472 KRTAP1-3Q8IUG1 177 aa7.63□□□□□ -1.19
CD44-210ENST00000434472 LINC01587Q99440 93 aa7.63□□□□□ -1.19
CD44-210ENST00000434472 CSPG4Q6UVK1 2322 aa7.62□□□□□ -1.19
CD44-210ENST00000434472 HTN1P15515 57 aa7.62□□□□□ -1.19
CD44-210ENST00000434472 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
CD44-210ENST00000434472 Q6ZSV7 163 aa7.62□□□□□ -1.19
CD44-210ENST00000434472 SLC25A29Q8N8R3 303 aa7.62□□□□□ -1.19
CD44-210ENST00000434472 DEFB104AQ8WTQ1 72 aa7.62□□□□□ -1.19
CD44-210ENST00000434472 KMT2BQ9UMN6 2715 aaPredicted RBP7.61□□□□□ -1.19
CD44-210ENST00000434472 RS1O15537 224 aa7.61□□□□□ -1.19
CD44-210ENST00000434472 SAP30O75446 220 aa7.61□□□□□ -1.19
CD44-210ENST00000434472 ZNF22P17026 224 aaPredicted RBP7.61□□□□□ -1.19
CD44-210ENST00000434472 CMC4P56277 68 aaPredicted RBP7.61□□□□□ -1.19
CD44-210ENST00000434472 SPANXA1Q9NS26 97 aa7.61□□□□□ -1.19
CD44-210ENST00000434472 PGPEP1Q9NXJ5 209 aa7.61□□□□□ -1.19
CD44-210ENST00000434472 CD28P10747 220 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 TSPEAR-AS2P59090 65 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 CFAP126Q5VTH2 177 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 AMELXQ99217 191 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 OPRPNQ99935 248 aaPredicted RBP7.6□□□□□ -1.19
CD44-210ENST00000434472 MRPL16Q9NX20 251 aaKnown RBP7.6□□□□□ -1.19
CD44-210ENST00000434472 CSMD1Q96PZ7 3565 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 ANKRD17O75179 2603 aaKnown RBP7.6□□□□□ -1.19
CD44-210ENST00000434472 IGHV3-73A0A0B4J1V6 119 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 DNAJC9-AS1A6NH13 148 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 J3QR89 54 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 IGHV3-53P01767 116 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 IGHV3-30P01768 117 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 IGHV3-30-5P0DP03 117 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 RPL24P83731 157 aaKnown RBP7.6□□□□□ -1.19
CD44-210ENST00000434472 GAGE13Q4V321 117 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 C11orf72Q8NBR9 251 aa7.6□□□□□ -1.19
CD44-210ENST00000434472 FLNCQ14315 2725 aa7.59□□□□□ -1.19
CD44-210ENST00000434472 A0A0J9YXV3 536 aa7.59□□□□□ -1.19
CD44-210ENST00000434472 FHL3Q13643 280 aa7.59□□□□□ -1.19
CD44-210ENST00000434472 STHQ8IWL8 128 aa7.59□□□□□ -1.19
CD44-210ENST00000434472 EPG5Q9HCE0 2579 aa7.58□□□□□ -1.2
CD44-210ENST00000434472 TMEM238C9JI98 176 aa7.58□□□□□ -1.2
CD44-210ENST00000434472 MRPS36P82909 103 aaKnown RBP7.58□□□□□ -1.2
CD44-210ENST00000434472 COTL1Q14019 142 aa7.58□□□□□ -1.2
CD44-210ENST00000434472 NDUFA11Q86Y39 141 aa7.58□□□□□ -1.2
CD44-210ENST00000434472 ACACBO00763 2458 aa7.58□□□□□ -1.2
CD44-210ENST00000434472 TINCRA0A1B0GVN0 87 aa7.57□□□□□ -1.2
CD44-210ENST00000434472 H3BMG7 143 aa7.57□□□□□ -1.2
CD44-210ENST00000434472 CCL24O00175 119 aa7.57□□□□□ -1.2
CD44-210ENST00000434472 TSPAN13O95857 204 aa7.57□□□□□ -1.2
CD44-210ENST00000434472 PROK1P58294 105 aa7.57□□□□□ -1.2
CD44-210ENST00000434472 ODF3L2Q3SX64 289 aa7.57□□□□□ -1.2
CD44-210ENST00000434472 CHCHD7Q9BUK0 85 aa7.57□□□□□ -1.2
CD44-210ENST00000434472 MYO18BQ8IUG5 2567 aa7.57□□□□□ -1.2
CD44-210ENST00000434472 AGRNO00468 2067 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 APOMO95445 188 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 TIMM21Q9BVV7 248 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 C16orf95Q9H693 158 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 UBE2D4Q9Y2X8 147 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 TSSC4Q9Y5U2 329 aaPredicted RBP7.56□□□□□ -1.2
CD44-210ENST00000434472 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.56□□□□□ -1.2
CD44-210ENST00000434472 TEX48A0A1B0GUV7 120 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 CFC1BP0CG36 223 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 CFC1P0CG37 223 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 UBE2D3P61077 147 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 UBE2D2P62837 147 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 WFDC2Q14508 124 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 Q6ZSN1 163 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 C10orf126Q8N4M7 172 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 IL17DQ8TAD2 202 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 PRO1854Q9UHT4 67 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 PRO0461Q9UI25 63 aa7.56□□□□□ -1.2
CD44-210ENST00000434472 A0A0B4J2C4 111 aa7.55□□□□□ -1.2
CD44-210ENST00000434472 IGHV1-58A0A0C4DH39 117 aa7.55□□□□□ -1.2
CD44-210ENST00000434472 LOC107984156A0A0G2JMH3 177 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms