RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 IGHV1OR15-1A0A075B7D0 117 aa5.51□□□□□ -1.53
COL17A1-204ENST00000433822 IGHV3-16A0A0C4DH30 117 aa5.51□□□□□ -1.53
COL17A1-204ENST00000433822 VCYO14598 125 aa5.51□□□□□ -1.53
COL17A1-204ENST00000433822 CCL25O15444 150 aa5.51□□□□□ -1.53
COL17A1-204ENST00000433822 Q5PR19 223 aa5.51□□□□□ -1.53
COL17A1-204ENST00000433822 ZC2HC1BQ5TFG8 222 aa5.51□□□□□ -1.53
COL17A1-204ENST00000433822 C18orf15Q96N68 181 aa5.51□□□□□ -1.53
COL17A1-204ENST00000433822 SCGB3A1Q96QR1 104 aa5.51□□□□□ -1.53
COL17A1-204ENST00000433822 SPAG8Q99932 426 aaPredicted RBP5.51□□□□□ -1.53
COL17A1-204ENST00000433822 MRPL35Q9NZE8 188 aaKnown RBP5.51□□□□□ -1.53
COL17A1-204ENST00000433822 CYSLTR1Q9Y271 337 aa5.51□□□□□ -1.53
COL17A1-204ENST00000433822 CR1P17927 2039 aa5.51□□□□□ -1.53
COL17A1-204ENST00000433822 TRAV26-2A0A0B4J265 109 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 E9PLD3 99 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 F6UB75 175 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 GNRH2O43555 120 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 HOXD3P31249 432 aaPredicted RBP5.5□□□□□ -1.53
COL17A1-204ENST00000433822 NMUP48645 174 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 CRYBA4P53673 196 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 FXYD7P58549 80 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 VAMP3Q15836 100 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 AMTNQ6UX39 209 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 C2orf66Q6UXQ4 117 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 Q6ZQT7 251 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 GTF2H5Q6ZYL4 71 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 PCP2Q8IVA1 136 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 C14orf178Q8N769 122 aaPredicted RBP5.5□□□□□ -1.53
COL17A1-204ENST00000433822 OR5A1Q8NGJ0 315 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 C4orf3Q8WVX3 66 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 KIR2DL4Q99706 377 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 PEMTQ9UBM1 199 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 MGAM2Q2M2H8 2515 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 MUC4Q99102 2169 aa5.5□□□□□ -1.53
COL17A1-204ENST00000433822 NBEAL2Q6ZNJ1 2754 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 TRBV25-1A0A075B6N4 114 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 TRAV25A0A0B4J276 109 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 IGIPA6NJ69 53 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 CD7P09564 240 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 ZNF688P0C7X2 276 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 NSUN5P1Q3KNT7 163 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 TMEM95Q3KNT9 176 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 UFSP1Q6NVU6 142 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 TRPT1Q86TN4 253 aaKnown RBP5.49□□□□□ -1.53
COL17A1-204ENST00000433822 OR4C5Q8NGB2 326 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 BAALCQ8WXS3 180 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 CHAC1Q9BUX1 264 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 CSTL1Q9H114 145 aa5.49□□□□□ -1.53
COL17A1-204ENST00000433822 CHTOPQ9Y3Y2 248 aaKnown RBP5.49□□□□□ -1.53
COL17A1-204ENST00000433822 IGKV2D-26A0A0A0MRZ7 120 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 OR11H12B2RN74 326 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 CRYGDP07320 174 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 MGPP08493 103 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 SYNJ2BPP57105 145 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 SUMO4Q6EEV6 95 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 ZFP2Q6ZN57 461 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 CEND1Q8N111 149 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 OR11H1Q8NG94 326 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 OR11H2Q8NH07 326 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 RPL39LQ96EH5 51 aaKnown RBP5.48□□□□□ -1.53
COL17A1-204ENST00000433822 TMEM160Q9NX00 188 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 TP73-AS1Q9UF72 201 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 CBY1Q9Y3M2 126 aa5.48□□□□□ -1.53
COL17A1-204ENST00000433822 TRAV8-6A0A0B4J262 113 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 TRAV12-3A0A0B4J271 114 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 A0A1B0GWB2 263 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 SDHAF1A6NFY7 115 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 C11orf86A6NJI1 115 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 J3KRW8 73 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 K7EP34 96 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 M0QY20 66 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 HOXA3O43365 443 aaPredicted RBP5.47□□□□□ -1.53
COL17A1-204ENST00000433822 HERVK_113P61574 105 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 PMVKQ15126 192 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 TCTEX1D4Q5JR98 221 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 NFE4Q86UQ8 179 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 Q8N1Y9 231 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 WFDC11Q8NEX6 87 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 X6R8D5 127 aa5.47□□□□□ -1.53
COL17A1-204ENST00000433822 IGKV3-7A0A075B6H7 116 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 MYMXA0A1B0GTQ4 84 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 GAGE10A6NGK3 116 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 PRSS29PA6NIE9 313 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 A8MWV9 139 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 H3BMM0 161 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 RHODO00212 210 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 SMIM13P0DJ93 91 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 DEFB1P60022 68 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 AMMECR1LQ6DCA0 310 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 C10orf99Q6UWK7 81 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 GTSCR1Q86UQ5 136 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 PHLDA1Q8WV24 401 aaPredicted RBP5.46□□□□□ -1.54
COL17A1-204ENST00000433822 SPXQ9BT56 116 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 MDFICQ9P1T7 246 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 PYGO1Q9Y3Y4 419 aa5.46□□□□□ -1.54
COL17A1-204ENST00000433822 TRBV7-3A0A075B6L6 115 aa5.45□□□□□ -1.54
COL17A1-204ENST00000433822 A0A1W2PPM0 123 aa5.45□□□□□ -1.54
COL17A1-204ENST00000433822 SRD5A1P18405 259 aa5.45□□□□□ -1.54
COL17A1-204ENST00000433822 EDN2P20800 178 aa5.45□□□□□ -1.54
COL17A1-204ENST00000433822 CMC4P56277 68 aaPredicted RBP5.45□□□□□ -1.54
COL17A1-204ENST00000433822 ZNF415Q09FC8 603 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms