RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 HIST1H2BKO60814 126 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 HIST1H2BJP06899 126 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 HIST1H2BOP23527 126 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 HIST1H2BBP33778 126 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 CRYBA4P53673 196 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 HIST1H2BDP58876 126 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 HIST1H2BCP62807 126 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 RHOHQ15669 191 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 HIST2H2BEQ16778 126 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.6■□□□□ 0.57
TMEM248-205ENST00000433271 HIST1H2BHQ93079 126 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 HIST1H2BNQ99877 126 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 HIST1H2BMQ99879 126 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 Q9UF83 564 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 PRADC1Q9BSG0 188 aa18.6■□□□□ 0.57
TMEM248-205ENST00000433271 TRBV6-5A0A0K0K1A5 114 aa18.59■□□□□ 0.57
TMEM248-205ENST00000433271 RAB5BP61020 215 aa18.59■□□□□ 0.57
TMEM248-205ENST00000433271 DNAJC30Q96LL9 226 aa18.59■□□□□ 0.57
TMEM248-205ENST00000433271 C20orf78Q9BR46 151 aa18.59■□□□□ 0.57
TMEM248-205ENST00000433271 C18orf32Q8TCD1 76 aa18.58■□□□□ 0.56
TMEM248-205ENST00000433271 SUMO2P61956 95 aaKnown RBP18.57■□□□□ 0.56
TMEM248-205ENST00000433271 NEXN-AS1Q8NBZ9 246 aa18.57■□□□□ 0.56
TMEM248-205ENST00000433271 ST20Q9HBF5 79 aa18.57■□□□□ 0.56
TMEM248-205ENST00000433271 PAX4O43316 350 aa18.56■□□□□ 0.56
TMEM248-205ENST00000433271 MAP1LC3AQ9H492 121 aa18.56■□□□□ 0.56
TMEM248-205ENST00000433271 TNFRSF18Q9Y5U5 241 aa18.56■□□□□ 0.56
TMEM248-205ENST00000433271 DEFB131BA0A096LNP1 70 aa18.56■□□□□ 0.56
TMEM248-205ENST00000433271 PRSS47A8MTI9 375 aa18.56■□□□□ 0.56
TMEM248-205ENST00000433271 TRBV7-3A0A075B6L6 115 aa18.55■□□□□ 0.56
TMEM248-205ENST00000433271 TRAV26-1A0A087WT03 109 aa18.55■□□□□ 0.56
TMEM248-205ENST00000433271 Q0VG73 95 aa18.55■□□□□ 0.56
TMEM248-205ENST00000433271 VSIG2Q96IQ7 327 aa18.55■□□□□ 0.56
TMEM248-205ENST00000433271 TRAV10A0A0B4J240 114 aa18.54■□□□□ 0.56
TMEM248-205ENST00000433271 RPL36AP83881 106 aaKnown RBP18.54■□□□□ 0.56
TMEM248-205ENST00000433271 RPL36ALQ969Q0 106 aaKnown RBP18.54■□□□□ 0.56
TMEM248-205ENST00000433271 IQCJQ1A5X6 159 aa18.53■□□□□ 0.56
TMEM248-205ENST00000433271 ZNRF2Q8NHG8 242 aa18.53■□□□□ 0.56
TMEM248-205ENST00000433271 LOC100131303A0A0U1RQF7 123 aa18.52■□□□□ 0.56
TMEM248-205ENST00000433271 LOC389332A0A1B0GUA5 103 aa18.52■□□□□ 0.56
TMEM248-205ENST00000433271 SDHAF1A6NFY7 115 aa18.52■□□□□ 0.56
TMEM248-205ENST00000433271 POLR2KP53803 58 aaKnown RBP18.52■□□□□ 0.56
TMEM248-205ENST00000433271 RPL32P62910 135 aaKnown RBP18.52■□□□□ 0.56
TMEM248-205ENST00000433271 TMEM70Q9BUB7 260 aa18.52■□□□□ 0.56
TMEM248-205ENST00000433271 A0A0J9YY99 117 aa18.52■□□□□ 0.55
TMEM248-205ENST00000433271 GYPEP15421 78 aa18.52■□□□□ 0.55
TMEM248-205ENST00000433271 GAGE12JA6NER3 117 aa18.51■□□□□ 0.55
TMEM248-205ENST00000433271 GAGE1Q13065 139 aa18.51■□□□□ 0.55
TMEM248-205ENST00000433271 GAGE4Q13068 117 aa18.51■□□□□ 0.55
TMEM248-205ENST00000433271 GAGE5Q13069 117 aa18.51■□□□□ 0.55
TMEM248-205ENST00000433271 GAGE13Q4V321 117 aa18.51■□□□□ 0.55
TMEM248-205ENST00000433271 BAGE3Q86Y29 109 aa18.5■□□□□ 0.55
TMEM248-205ENST00000433271 PRSS3P2Q8NHM4 247 aa18.5■□□□□ 0.55
TMEM248-205ENST00000433271 SMIM2Q9BVW6 85 aa18.5■□□□□ 0.55
TMEM248-205ENST00000433271 H3BNG1 76 aa18.49■□□□□ 0.55
TMEM248-205ENST00000433271 VCYO14598 125 aa18.49■□□□□ 0.55
TMEM248-205ENST00000433271 PMCHP20382 165 aa18.49■□□□□ 0.55
TMEM248-205ENST00000433271 IFI27P40305 119 aaPredicted RBP18.49■□□□□ 0.55
TMEM248-205ENST00000433271 NXT2Q9NPJ8 142 aaKnown RBP18.49■□□□□ 0.55
TMEM248-205ENST00000433271 TRBV27A0A0K0K1C4 114 aa18.49■□□□□ 0.55
TMEM248-205ENST00000433271 UBE2D3P61077 147 aa18.49■□□□□ 0.55
TMEM248-205ENST00000433271 UBE2D2P62837 147 aa18.49■□□□□ 0.55
TMEM248-205ENST00000433271 Q8N8P6 123 aa18.49■□□□□ 0.55
TMEM248-205ENST00000433271 IGLV2-18A0A075B6J9 118 aa18.48■□□□□ 0.55
TMEM248-205ENST00000433271 LINC00694P0DN24 101 aa18.48■□□□□ 0.55
TMEM248-205ENST00000433271 PHLDA1Q8WV24 401 aaPredicted RBP18.48■□□□□ 0.55
TMEM248-205ENST00000433271 NIT1Q86X76 327 aa18.47■□□□□ 0.55
TMEM248-205ENST00000433271 NEGR1Q7Z3B1 354 aa18.46■□□□□ 0.55
TMEM248-205ENST00000433271 DAZ4Q86SG3 579 aaKnown RBP18.46■□□□□ 0.55
TMEM248-205ENST00000433271 DAZ3Q9NR90 486 aaKnown RBP18.46■□□□□ 0.55
TMEM248-205ENST00000433271 I3L3M4 83 aa18.45■□□□□ 0.54
TMEM248-205ENST00000433271 LINC00614P0C842 121 aa18.45■□□□□ 0.54
TMEM248-205ENST00000433271 NDUFA6P56556 154 aa18.45■□□□□ 0.54
TMEM248-205ENST00000433271 TMA7Q9Y2S6 64 aaKnown RBP18.45■□□□□ 0.54
TMEM248-205ENST00000433271 MRPL23Q16540 153 aaKnown RBP18.45■□□□□ 0.54
TMEM248-205ENST00000433271 URB1-AS1Q96HZ7 61 aa18.45■□□□□ 0.54
TMEM248-205ENST00000433271 ICOSQ9Y6W8 199 aa18.45■□□□□ 0.54
TMEM248-205ENST00000433271 TGP01266 2768 aa18.44■□□□□ 0.54
TMEM248-205ENST00000433271 COA6Q5JTJ3 125 aaKnown RBP18.44■□□□□ 0.54
TMEM248-205ENST00000433271 FA2HQ7L5A8 372 aa18.44■□□□□ 0.54
TMEM248-205ENST00000433271 KIR2DL4Q99706 377 aa18.44■□□□□ 0.54
TMEM248-205ENST00000433271 LINC01546A6NGU7 62 aa18.42■□□□□ 0.54
TMEM248-205ENST00000433271 SERF1AO75920 110 aa18.42■□□□□ 0.54
TMEM248-205ENST00000433271 IGHV3-38A0A0C4DH36 116 aa18.41■□□□□ 0.54
TMEM248-205ENST00000433271 K7EMI3 77 aa18.41■□□□□ 0.54
TMEM248-205ENST00000433271 RNASEKQ6P5S7 137 aaKnown RBP18.41■□□□□ 0.54
TMEM248-205ENST00000433271 SH2D6Q7Z4S9 175 aa18.41■□□□□ 0.54
TMEM248-205ENST00000433271 ATP6V0E2Q8NHE4 81 aa18.41■□□□□ 0.54
TMEM248-205ENST00000433271 CHCHD1Q96BP2 118 aaKnown RBP18.41■□□□□ 0.54
TMEM248-205ENST00000433271 AP5S1Q9NUS5 200 aa18.41■□□□□ 0.54
TMEM248-205ENST00000433271 A0A096LPF7 62 aa18.41■□□□□ 0.54
TMEM248-205ENST00000433271 S100A6P06703 90 aa18.41■□□□□ 0.54
TMEM248-205ENST00000433271 LINC00310P59036 64 aa18.41■□□□□ 0.54
TMEM248-205ENST00000433271 TCAPO15273 167 aa18.4■□□□□ 0.54
TMEM248-205ENST00000433271 TSHBP01222 138 aa18.39■□□□□ 0.53
TMEM248-205ENST00000433271 FCER1GP30273 86 aa18.38■□□□□ 0.53
TMEM248-205ENST00000433271 COTL1Q14019 142 aa18.38■□□□□ 0.53
TMEM248-205ENST00000433271 DEFB104AQ8WTQ1 72 aa18.38■□□□□ 0.53
TMEM248-205ENST00000433271 NUPR1O60356 82 aa18.38■□□□□ 0.53
TMEM248-205ENST00000433271 LAGE3Q14657 143 aa18.38■□□□□ 0.53
TMEM248-205ENST00000433271 C15orf53Q8NAA6 179 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms