RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 BAALCQ8WXS3 180 aa6.18□□□□□ -1.42
CDC42-IT1-201ENST00000431803 CHCHD7Q9BUK0 85 aa6.18□□□□□ -1.42
CDC42-IT1-201ENST00000431803 URGCP-MRPS24S4R325 110 aa6.18□□□□□ -1.42
CDC42-IT1-201ENST00000431803 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.17□□□□□ -1.42
CDC42-IT1-201ENST00000431803 TRBV7-3A0A075B6L6 115 aa6.17□□□□□ -1.42
CDC42-IT1-201ENST00000431803 AKR1C3P42330 323 aa6.17□□□□□ -1.42
CDC42-IT1-201ENST00000431803 RPL36AP83881 106 aaKnown RBP6.17□□□□□ -1.42
CDC42-IT1-201ENST00000431803 OR10G8Q8NGN5 311 aa6.17□□□□□ -1.42
CDC42-IT1-201ENST00000431803 RPL36ALQ969Q0 106 aaKnown RBP6.17□□□□□ -1.42
CDC42-IT1-201ENST00000431803 RMI2Q96E14 147 aa6.17□□□□□ -1.42
CDC42-IT1-201ENST00000431803 MLST8Q9BVC4 326 aa6.17□□□□□ -1.42
CDC42-IT1-201ENST00000431803 KLK12Q9UKR0 248 aa6.17□□□□□ -1.42
CDC42-IT1-201ENST00000431803 LRP1Q07954 4544 aaKnown RBP6.17□□□□□ -1.42
CDC42-IT1-201ENST00000431803 IGKV2D-24A0A075B6R9 120 aa6.16□□□□□ -1.42
CDC42-IT1-201ENST00000431803 A0A087WX48 190 aa6.16□□□□□ -1.42
CDC42-IT1-201ENST00000431803 PAGE4O60829 102 aa6.16□□□□□ -1.42
CDC42-IT1-201ENST00000431803 CXCL1P09341 107 aa6.16□□□□□ -1.42
CDC42-IT1-201ENST00000431803 ZNF345Q14585 488 aa6.16□□□□□ -1.42
CDC42-IT1-201ENST00000431803 LINC01620Q4KN68 170 aa6.16□□□□□ -1.42
CDC42-IT1-201ENST00000431803 PRR27Q6MZM9 219 aa6.16□□□□□ -1.42
CDC42-IT1-201ENST00000431803 Q8N976 141 aa6.16□□□□□ -1.42
CDC42-IT1-201ENST00000431803 MBD3L1Q8WWY6 194 aa6.16□□□□□ -1.42
CDC42-IT1-201ENST00000431803 UBE2WQ96B02 151 aa6.16□□□□□ -1.42
CDC42-IT1-201ENST00000431803 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 TRBV6-8A0A0A6YYG3 113 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 UMAD1C9J7I0 102 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 SMLR1H3BR10 107 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 SNAI2O43623 268 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 S100A9P06702 114 aaKnown RBP6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 RAB4BP61018 213 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 RPL19P84098 196 aaKnown RBP6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 ELOBQ15370 118 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 RGS21Q2M5E4 152 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 SCXQ7RTU7 201 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 KCNRGQ8N5I3 272 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 OR10AG1Q8NH19 301 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 SFT2D1Q8WV19 159 aa6.15□□□□□ -1.42
CDC42-IT1-201ENST00000431803 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.43
CDC42-IT1-201ENST00000431803 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
CDC42-IT1-201ENST00000431803 RBFOX3A6NFN3 312 aa6.14□□□□□ -1.43
CDC42-IT1-201ENST00000431803 OR5AL1P0C617 328 aa6.14□□□□□ -1.43
CDC42-IT1-201ENST00000431803 Q0VG73 95 aa6.14□□□□□ -1.43
CDC42-IT1-201ENST00000431803 ENHOQ6UWT2 76 aa6.14□□□□□ -1.43
CDC42-IT1-201ENST00000431803 NEXN-AS1Q8NBZ9 246 aa6.14□□□□□ -1.43
CDC42-IT1-201ENST00000431803 FAM213BQ8TBF2 198 aa6.14□□□□□ -1.43
CDC42-IT1-201ENST00000431803 CHAC1Q9BUX1 264 aa6.14□□□□□ -1.43
CDC42-IT1-201ENST00000431803 HMSDA8MTL9 139 aa6.13□□□□□ -1.43
CDC42-IT1-201ENST00000431803 KRTAP29-1A8MX34 341 aaPredicted RBP6.13□□□□□ -1.43
CDC42-IT1-201ENST00000431803 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
CDC42-IT1-201ENST00000431803 ZNF56Q15929 161 aa6.13□□□□□ -1.43
CDC42-IT1-201ENST00000431803 MPV17L2Q567V2 206 aa6.13□□□□□ -1.43
CDC42-IT1-201ENST00000431803 KCNIP4Q6PIL6 250 aa6.13□□□□□ -1.43
CDC42-IT1-201ENST00000431803 BAGE2Q86Y30 109 aa6.13□□□□□ -1.43
CDC42-IT1-201ENST00000431803 ZNF471Q9BX82 626 aaPredicted RBP6.13□□□□□ -1.43
CDC42-IT1-201ENST00000431803 A0A1B0GV50 99 aa6.12□□□□□ -1.43
CDC42-IT1-201ENST00000431803 BCL2L11O43521 198 aa6.12□□□□□ -1.43
CDC42-IT1-201ENST00000431803 PFDN1O60925 122 aa6.12□□□□□ -1.43
CDC42-IT1-201ENST00000431803 CIRBP-AS1Q8TBR5 109 aa6.12□□□□□ -1.43
CDC42-IT1-201ENST00000431803 DEFB104AQ8WTQ1 72 aa6.12□□□□□ -1.43
CDC42-IT1-201ENST00000431803 C1orf43Q9BWL3 253 aa6.12□□□□□ -1.43
CDC42-IT1-201ENST00000431803 VAX2Q9UIW0 290 aa6.12□□□□□ -1.43
CDC42-IT1-201ENST00000431803 KIF25-AS1Q9Y6Z4 181 aa6.12□□□□□ -1.43
CDC42-IT1-201ENST00000431803 A0A0D9SG52 128 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 MUC21A0A0G2JKD1 596 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 MUC21A0A140T8X8 626 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 TMEM262E9PQX1 116 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 CRPP02741 224 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 RPL35P42766 123 aaKnown RBP6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 PKIAP61925 76 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 C14orf177Q52M58 125 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 SPANXN1Q5VSR9 72 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 NTM-AS1Q6ZSK4 140 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 TMUB2Q71RG4 321 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 C15orf54Q8N8G6 183 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 C11orf52Q96A22 123 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 PRR34Q9NV39 138 aa6.11□□□□□ -1.43
CDC42-IT1-201ENST00000431803 KANTRA0A1W2PQU2 76 aa6.1□□□□□ -1.43
CDC42-IT1-201ENST00000431803 ANGP03950 147 aaKnown RBP6.1□□□□□ -1.43
CDC42-IT1-201ENST00000431803 MIAQ16674 131 aa6.1□□□□□ -1.43
CDC42-IT1-201ENST00000431803 TMEM97Q5BJF2 176 aa6.1□□□□□ -1.43
CDC42-IT1-201ENST00000431803 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.1□□□□□ -1.43
CDC42-IT1-201ENST00000431803 AP1S3Q96PC3 154 aa6.1□□□□□ -1.43
CDC42-IT1-201ENST00000431803 CHCHD5Q9BSY4 110 aa6.1□□□□□ -1.43
CDC42-IT1-201ENST00000431803 DERL1Q9BUN8 251 aa6.1□□□□□ -1.43
CDC42-IT1-201ENST00000431803 TRAV1-1A0A0B4J248 108 aa6.09□□□□□ -1.43
CDC42-IT1-201ENST00000431803 USP17L23D6RBM5 183 aa6.09□□□□□ -1.43
CDC42-IT1-201ENST00000431803 F5H697 171 aa6.09□□□□□ -1.43
CDC42-IT1-201ENST00000431803 IGLV2-8P01709 118 aa6.09□□□□□ -1.43
CDC42-IT1-201ENST00000431803 IGLC6P0CF74 106 aa6.09□□□□□ -1.43
CDC42-IT1-201ENST00000431803 EIF5AP63241 154 aaKnown RBP6.09□□□□□ -1.43
CDC42-IT1-201ENST00000431803 CCL20P78556 96 aa6.09□□□□□ -1.43
CDC42-IT1-201ENST00000431803 IQCJQ1A5X6 159 aa6.09□□□□□ -1.43
CDC42-IT1-201ENST00000431803 KRTAP26-1Q6PEX3 210 aa6.09□□□□□ -1.43
CDC42-IT1-201ENST00000431803 MANBALQ9NQG1 85 aa6.09□□□□□ -1.43
CDC42-IT1-201ENST00000431803 TRBV25-1A0A075B6N4 114 aa6.08□□□□□ -1.44
CDC42-IT1-201ENST00000431803 C19orf71A6NCJ1 209 aa6.08□□□□□ -1.44
CDC42-IT1-201ENST00000431803 M0QY20 66 aa6.08□□□□□ -1.44
CDC42-IT1-201ENST00000431803 HLA-DQA1P01909 254 aa6.08□□□□□ -1.44
CDC42-IT1-201ENST00000431803 PRSS1P07477 247 aa6.08□□□□□ -1.44
CDC42-IT1-201ENST00000431803 SMIM17P0DL12 118 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms