RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FAM236CP0DP71 79 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 HTN3P15516 51 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST1H1BP16401 226 aaKnown RBP1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 SELENOWP63302 87 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 DIAPH2-AS1Q14236 149 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 LTC4SQ16873 150 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 TMEM97Q5BJF2 176 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 TMEM42Q69YG0 159 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 SLC25A26Q70HW3 274 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 KTN1-AS1Q86SY8 53 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF439Q8NDP4 499 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 GRPEL2Q8TAA5 225 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 ACOT12Q8WYK0 555 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 PP6455Q8WZ26 134 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF625Q96I27 306 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 PHB2Q99623 299 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 METTL1Q9UBP6 276 aaKnown RBP1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 BAIAP2Q9UQB8 552 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 TMEM56-RWDD3S4R434 201 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 VPS13DQ5THJ4 4388 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 MYCBP2O75592 4640 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 PLECQ15149 4684 aaKnown RBP1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 PKD1P98161 4303 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 FAT2Q9NYQ8 4349 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 DNAH2Q9P225 4427 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 A0A087WTM6 91 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 TRAV2A0A0B4J234 112 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 TRAV5A0A0B4J249 113 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 TMEM30CPA0ZSE6 113 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 IRGMA1A4Y4 181 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 IBA57-AS1B1ANH7 110 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 MCRIP1C9JLW8 97 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 H0YJX3 145 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 CDC42EP2O14613 210 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST1H2BOP23527 126 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST1H2BBP33778 126 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 RPS27P42677 84 aaKnown RBP1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 EIF2B2P49770 351 aaKnown RBP1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 FXYD2P54710 66 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 AQP4P55087 323 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST1H2BDP58876 126 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 B2MP61769 119 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST1H2BCP62807 126 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 SUPT4H1P63272 117 aaKnown RBP1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 RHOGP84095 191 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST2H2BEQ16778 126 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 MORN2Q502X0 79 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 LELP1Q5T871 98 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 AADACL3Q5VUY0 350 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 RPL22L1Q6P5R6 122 aaKnown RBP1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 LINC00471Q8N535 108 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 TTC9CQ8N5M4 171 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 OR4D11Q8NGI4 311 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 OTOSQ8NHW6 89 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST1H2BHQ93079 126 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 LEAP2Q969E1 77 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 BORCS7Q96B45 105 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 TOMM6Q96B49 74 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 S100A13Q99584 98 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST1H2BNQ99877 126 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST1H2BMQ99879 126 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 FAM103A1Q9BTL3 118 aaKnown RBP1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 TRAPPC2LQ9UL33 140 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 PRELID3BQ9Y3B1 194 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 V9GYS6 101 aa1.12□□□□□ -2.23
HMGB1P27-201ENST00000431429 DNAH6Q9C0G6 4158 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 VPS13BQ7Z7G8 4022 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 MUC2Q02817 5179 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 TRAV14DV4A0A0A6YYC5 116 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 A0A0D9SG52 128 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 MEIS3P1A6NDR6 274 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 RIIAD1A6NNX1 92 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 PPP5D1E7EU14 171 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 H3BNG1 76 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 AIPO00170 330 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 NDUFA4O00483 81 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 YPEL1O60688 119 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF682O95780 498 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 APOA2P02652 100 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 CTSDP07339 412 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF705BP0CI00 300 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 SPI1P17947 270 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 EVI2AP22794 236 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 NFYAP23511 347 aaPredicted RBP1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 ATP5G3P48201 142 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 TMEM258P61165 79 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 GNG11P61952 73 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 SNRPD3P62318 126 aaKnown RBP1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 SLC38A11Q08AI6 406 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 RTL8BQ17RB0 113 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 RRN3P1Q2M238 152 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 VMA21Q3ZAQ7 101 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 BCL2L15Q5TBC7 163 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF833PQ6ZTB9 187 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 C10orf126Q8N4M7 172 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 ANKRD29Q8N6D5 301 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 OR5D14Q8NGL3 314 aa1.11□□□□□ -2.23
HMGB1P27-201ENST00000431429 TERB2Q8NHR7 220 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms