RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-204	ENST00000431283	TMEM183B	Q1AE95	376 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	IAH1	Q2TAA2	248 aa	Predicted RBP	2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	ACOT6	Q3I5F7	207 aa	Predicted RBP	2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	KRTAP13-2	Q52LG2	175 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	STX12	Q86Y82	276 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	PCP2	Q8IVA1	136 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	TMEM183A	Q8IXX5	376 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	OR10G4	Q8NGN3	311 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	BLNK	Q8WV28	456 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	FAM19A4	Q96LR4	140 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	MGST2	Q99735	147 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	ATP5S	Q99766	215 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	PRADC1	Q9BSG0	188 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	SPX	Q9BT56	116 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	NDFIP1	Q9BT67	221 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	UQCC1	Q9NVA1	299 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	TMEM14C	Q9P0S9	112 aa		2.19	□□□□□ -2.06
PTPN4-204	ENST00000431283	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	TRAV4	A0A0B4J268	109 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	C7orf66	A4D0T2	115 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	NAP1L6	A6NFF2	107 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	FAM25E	A8MYX2	175 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	GGTLC3	B5MD39	225 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283		M0R2P5	195 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	RS1	O15537	224 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	CCNK	O75909	580 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	CST7	O76096	145 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	IGKV2D-40	P01614	121 aa	Predicted RBP	2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	IGHV3-30	P01768	117 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	IGHV3-33	P01772	117 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	IGHV3-30-3	P0DP02	117 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	IGHV3-30-5	P0DP03	117 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	S100A11	P31949	105 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	TMBIM6	P55061	237 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	BAX	Q07812	192 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	SPCS2	Q15005	226 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	SPANXN2	Q5MJ10	180 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	LELP1	Q5T871	98 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	MIC13	Q5XKP0	118 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	KCNIP4	Q6PIL6	250 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283		Q6ZSA8	131 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	EXOC3-AS1	Q8N2X6	119 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	ZFAND2A	Q8N6M9	145 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283		Q8N976	141 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	BCL7B	Q9BQE9	202 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	MRPS26	Q9BYN8	205 aa	Known RBP	2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	KCNIP2	Q9NS61	270 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	ZNF492	Q9P255	531 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	NAGK	Q9UJ70	344 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	URGCP-MRPS24	S4R325	110 aa		2.18	□□□□□ -2.06
PTPN4-204	ENST00000431283	TRAV8-1	A0A0A6YYK1	113 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	TRAV21	A0A0B4J279	112 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	UBE2L5P	A0A1B0GUS4	154 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	RBAKDN	A6NC62	111 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	NDUFB6	O95139	128 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	OR10J4	P0C629	311 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	NBEAP1	P0C6P0	100 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	PYY	P10082	97 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	MGST1	P10620	155 aa	Known RBP	2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	FGF7	P21781	194 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	SULT1A1	P50225	295 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	ZNF266	Q14584	549 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	RHOH	Q15669	191 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	ATP6V1F	Q16864	119 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	FAM74A1	Q5RGS3	127 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	TRIQK	Q629K1	86 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	SCX	Q7RTU7	201 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	ATP6V0E2	Q8NHE4	81 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283		Q8TAT8	98 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	CMTM2	Q8TAZ6	248 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	KCNS1	Q96KK3	526 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	CHAC1	Q9BUX1	264 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	NMES1	Q9C002	83 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	SLIRP	Q9GZT3	109 aa	Known RBP	2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	GTSF1L	Q9H1H1	148 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	OR51M1	Q9H341	326 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	LSM5	Q9Y4Y9	91 aa	Known RBP	2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	LENEP	Q9Y5L5	61 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	LRP1	Q07954	4544 aa	Known RBP	2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283	DNAH8	Q96JB1	4490 aa		2.17	□□□□□ -2.06
PTPN4-204	ENST00000431283		A0A087WWC5	75 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	TRBV6-4	A0A1B0GX49	114 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	FAM24A	A6NFZ4	105 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	C17orf112	F2Z3M2	114 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	LECT2	O14960	151 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	GNRH2	O43555	120 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	OR7C2	O60412	319 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	IGLV2-8	P01709	118 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	FGF8	P55075	233 aa	Predicted RBP	2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	TAS2R45	P59539	299 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	S100A10	P60903	97 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	RAN	P62826	216 aa	Known RBP	2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	ELOB	Q15370	118 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283		Q6AWC8	147 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283		Q6ZQT7	251 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	SLC25A29	Q8N8R3	303 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	HSD17B11	Q8NBQ5	300 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	MITD1	Q8WV92	249 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	ASB13	Q8WXK3	278 aa		2.16	□□□□□ -2.06
PTPN4-204	ENST00000431283	BAALC	Q8WXS3	180 aa		2.16	□□□□□ -2.06

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms