RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 P01737 135 aa13.91□□□□□ -0.18
PTPRA-207ENST00000431048 GAGE6Q13070 117 aa13.91□□□□□ -0.18
PTPRA-207ENST00000431048 ZNF56Q15929 161 aa13.91□□□□□ -0.18
PTPRA-207ENST00000431048 TRBV6-1A0A0K0K1D8 114 aa13.9□□□□□ -0.18
PTPRA-207ENST00000431048 REG3AQ06141 175 aa13.9□□□□□ -0.18
PTPRA-207ENST00000431048 DERL1Q9BUN8 251 aa13.9□□□□□ -0.18
PTPRA-207ENST00000431048 KIF25-AS1Q9Y6Z4 181 aa13.9□□□□□ -0.18
PTPRA-207ENST00000431048 TRBV25-1A0A075B6N4 114 aa13.89□□□□□ -0.19
PTPRA-207ENST00000431048 GZMBP10144 247 aa13.89□□□□□ -0.19
PTPRA-207ENST00000431048 ODF1Q14990 250 aa13.89□□□□□ -0.19
PTPRA-207ENST00000431048 IQCJQ1A5X6 159 aa13.89□□□□□ -0.19
PTPRA-207ENST00000431048 WDR73Q6P4I2 378 aa13.89□□□□□ -0.19
PTPRA-207ENST00000431048 S100ZQ8WXG8 99 aa13.89□□□□□ -0.19
PTPRA-207ENST00000431048 FMC1Q96HJ9 113 aa13.89□□□□□ -0.19
PTPRA-207ENST00000431048 NDUFA13Q9P0J0 144 aa13.89□□□□□ -0.19
PTPRA-207ENST00000431048 FAM74A7A6NL05 159 aa13.88□□□□□ -0.19
PTPRA-207ENST00000431048 UBE2G2P60604 165 aa13.88□□□□□ -0.19
PTPRA-207ENST00000431048 IGLV10-54A0A075B6I4 117 aa13.87□□□□□ -0.19
PTPRA-207ENST00000431048 UPK1BO75841 260 aa13.87□□□□□ -0.19
PTPRA-207ENST00000431048 ZNF471Q9BX82 626 aaPredicted RBP13.87□□□□□ -0.19
PTPRA-207ENST00000431048 GAS8-AS1O95177 125 aa13.86□□□□□ -0.19
PTPRA-207ENST00000431048 LTAP01374 205 aa13.86□□□□□ -0.19
PTPRA-207ENST00000431048 CXCL1P09341 107 aa13.86□□□□□ -0.19
PTPRA-207ENST00000431048 PRR3P79522 188 aaKnown RBP13.86□□□□□ -0.19
PTPRA-207ENST00000431048 ZNF726P1Q15940 193 aa13.86□□□□□ -0.19
PTPRA-207ENST00000431048 OR10AG1Q8NH19 301 aa13.86□□□□□ -0.19
PTPRA-207ENST00000431048 CTXND1A0A1B0GTU2 59 aa13.85□□□□□ -0.19
PTPRA-207ENST00000431048 A0A1B0GUV1 79 aa13.85□□□□□ -0.19
PTPRA-207ENST00000431048 A6NHS1 94 aa13.85□□□□□ -0.19
PTPRA-207ENST00000431048 UBE2G1P62253 170 aa13.85□□□□□ -0.19
PTPRA-207ENST00000431048 C20orf203Q8NBC4 194 aa13.85□□□□□ -0.19
PTPRA-207ENST00000431048 AQP10Q96PS8 301 aa13.85□□□□□ -0.19
PTPRA-207ENST00000431048 SSBP4Q9BWG4 385 aaPredicted RBP13.85□□□□□ -0.19
PTPRA-207ENST00000431048 IGHV1-24A0A0C4DH33 117 aa13.84□□□□□ -0.19
PTPRA-207ENST00000431048 F5H697 171 aa13.84□□□□□ -0.19
PTPRA-207ENST00000431048 SNAI2O43623 268 aa13.84□□□□□ -0.19
PTPRA-207ENST00000431048 IFITM3Q01628 133 aa13.84□□□□□ -0.19
PTPRA-207ENST00000431048 SPINK6Q6UWN8 80 aa13.83□□□□□ -0.2
PTPRA-207ENST00000431048 GTSF1Q8WW33 167 aa13.83□□□□□ -0.2
PTPRA-207ENST00000431048 TCEAL7Q9BRU2 100 aa13.83□□□□□ -0.2
PTPRA-207ENST00000431048 REG3GQ6UW15 175 aa13.82□□□□□ -0.2
PTPRA-207ENST00000431048 OR5AL1P0C617 328 aa13.81□□□□□ -0.2
PTPRA-207ENST00000431048 COX6A2Q02221 97 aa13.81□□□□□ -0.2
PTPRA-207ENST00000431048 NDUFS6O75380 124 aaKnown RBP13.8□□□□□ -0.2
PTPRA-207ENST00000431048 RPS10P46783 165 aaKnown RBP13.8□□□□□ -0.2
PTPRA-207ENST00000431048 FHITP49789 147 aa13.8□□□□□ -0.2
PTPRA-207ENST00000431048 IGLV4-60A0A075B6I1 120 aa13.79□□□□□ -0.2
PTPRA-207ENST00000431048 MAJINQ3KP22 176 aa13.79□□□□□ -0.2
PTPRA-207ENST00000431048 SPANXN1Q5VSR9 72 aa13.79□□□□□ -0.2
PTPRA-207ENST00000431048 CFAP161Q6P656 301 aa13.79□□□□□ -0.2
PTPRA-207ENST00000431048 SRSF9Q13242 221 aaKnown RBP eCLIP13.78□□□□□ -0.2
PTPRA-207ENST00000431048 C15orf56Q8N910 161 aa13.78□□□□□ -0.2
PTPRA-207ENST00000431048 PRSS3P2Q8NHM4 247 aa13.78□□□□□ -0.2
PTPRA-207ENST00000431048 GFRA4Q9GZZ7 299 aa13.78□□□□□ -0.2
PTPRA-207ENST00000431048 LPAP08519 4548 aa13.77□□□□□ -0.2
PTPRA-207ENST00000431048 SMIM17P0DL12 118 aa13.77□□□□□ -0.21
PTPRA-207ENST00000431048 RAB5CP51148 216 aa13.77□□□□□ -0.21
PTPRA-207ENST00000431048 STPG4Q8N801 248 aa13.77□□□□□ -0.21
PTPRA-207ENST00000431048 M0QY20 66 aa13.76□□□□□ -0.21
PTPRA-207ENST00000431048 TMEM243Q9BU79 118 aa13.76□□□□□ -0.21
PTPRA-207ENST00000431048 MUC21A0A0G2JKD1 596 aa13.75□□□□□ -0.21
PTPRA-207ENST00000431048 MUC21A0A140T8X8 626 aa13.75□□□□□ -0.21
PTPRA-207ENST00000431048 AKR1C3P42330 323 aa13.75□□□□□ -0.21
PTPRA-207ENST00000431048 RPL7L1Q6DKI1 246 aaKnown RBP13.75□□□□□ -0.21
PTPRA-207ENST00000431048 IGKV2-24A0A0C4DH68 120 aa13.74□□□□□ -0.21
PTPRA-207ENST00000431048 S100A9P06702 114 aaKnown RBP13.74□□□□□ -0.21
PTPRA-207ENST00000431048 LYPD6BQ8NI32 183 aa13.74□□□□□ -0.21
PTPRA-207ENST00000431048 AP1S3Q96PC3 154 aa13.74□□□□□ -0.21
PTPRA-207ENST00000431048 MLST8Q9BVC4 326 aa13.74□□□□□ -0.21
PTPRA-207ENST00000431048 BORCS7-ASMTA0A0B4J1R7 106 aa13.73□□□□□ -0.21
PTPRA-207ENST00000431048 H7C1H1 209 aa13.73□□□□□ -0.21
PTPRA-207ENST00000431048 AKR1C8PQ5T2L2 129 aa13.72□□□□□ -0.21
PTPRA-207ENST00000431048 CST9LP1Q5W188 147 aa13.72□□□□□ -0.21
PTPRA-207ENST00000431048 STOML3Q8TAV4 291 aa13.72□□□□□ -0.21
PTPRA-207ENST00000431048 PGLYRP4Q96LB8 373 aa13.72□□□□□ -0.21
PTPRA-207ENST00000431048 MAP1LC3B2A6NCE7 125 aa13.71□□□□□ -0.21
PTPRA-207ENST00000431048 GAGE12HA6NDE8 117 aa13.71□□□□□ -0.21
PTPRA-207ENST00000431048 MAP1LC3BQ9GZQ8 125 aa13.71□□□□□ -0.21
PTPRA-207ENST00000431048 LINC00474Q9P2X8 69 aa13.71□□□□□ -0.21
PTPRA-207ENST00000431048 SULT1A2P50226 295 aa13.7□□□□□ -0.22
PTPRA-207ENST00000431048 DEFA1P59665 94 aa13.7□□□□□ -0.22
PTPRA-207ENST00000431048 DEFA3P59666 94 aa13.7□□□□□ -0.22
PTPRA-207ENST00000431048 SSTP61278 116 aa13.7□□□□□ -0.22
PTPRA-207ENST00000431048 INO80EQ8NBZ0 244 aaPredicted RBP13.7□□□□□ -0.22
PTPRA-207ENST00000431048 SUMO4Q6EEV6 95 aa13.69□□□□□ -0.22
PTPRA-207ENST00000431048 Q6ZRP5 223 aa13.69□□□□□ -0.22
PTPRA-207ENST00000431048 BAGE2Q86Y30 109 aa13.69□□□□□ -0.22
PTPRA-207ENST00000431048 A0A096LNI7 61 aa13.68□□□□□ -0.22
PTPRA-207ENST00000431048 GVQW2A0A096LPI5 108 aaPredicted RBP13.68□□□□□ -0.22
PTPRA-207ENST00000431048 HIGD2BQ4VC39 106 aa13.68□□□□□ -0.22
PTPRA-207ENST00000431048 UBE2L6O14933 153 aa13.67□□□□□ -0.22
PTPRA-207ENST00000431048 NKX2-5P52952 324 aaPredicted RBP13.67□□□□□ -0.22
PTPRA-207ENST00000431048 Q5BKY6 102 aa13.67□□□□□ -0.22
PTPRA-207ENST00000431048 PKIGQ9Y2B9 76 aa13.67□□□□□ -0.22
PTPRA-207ENST00000431048 MGPP08493 103 aa13.66□□□□□ -0.22
PTPRA-207ENST00000431048 RASL11AQ6T310 242 aa13.66□□□□□ -0.22
PTPRA-207ENST00000431048 ALG5Q9Y673 324 aa13.66□□□□□ -0.22
PTPRA-207ENST00000431048 PAGE4O60829 102 aa13.65□□□□□ -0.22
PTPRA-207ENST00000431048 MED28Q9H204 178 aa13.65□□□□□ -0.22
PTPRA-207ENST00000431048 NIT2Q9NQR4 276 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms