RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RHOHQ15669 191 aa10.18□□□□□ -0.78
HOXC4-202ENST00000430889 ZNF56Q15929 161 aa10.18□□□□□ -0.78
HOXC4-202ENST00000430889 NSUN5P1Q3KNT7 163 aa10.18□□□□□ -0.78
HOXC4-202ENST00000430889 C11orf72Q8NBR9 251 aa10.18□□□□□ -0.78
HOXC4-202ENST00000430889 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
HOXC4-202ENST00000430889 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
HOXC4-202ENST00000430889 CITED2Q99967 270 aaPredicted RBP10.18□□□□□ -0.78
HOXC4-202ENST00000430889 TP53TG1Q9Y2A0 90 aa10.18□□□□□ -0.78
HOXC4-202ENST00000430889 NF1P21359 2839 aa10.18□□□□□ -0.78
HOXC4-202ENST00000430889 ITPR2Q14571 2701 aa10.18□□□□□ -0.78
HOXC4-202ENST00000430889 MAPKAPK5-AS1Q8N8E1 139 aa10.18□□□□□ -0.78
HOXC4-202ENST00000430889 TSSC4Q9Y5U2 329 aaPredicted RBP10.18□□□□□ -0.78
HOXC4-202ENST00000430889 HECTD1Q9ULT8 2610 aa10.17□□□□□ -0.78
HOXC4-202ENST00000430889 TRBV25-1A0A075B6N4 114 aa10.17□□□□□ -0.78
HOXC4-202ENST00000430889 CCL25O15444 150 aa10.17□□□□□ -0.78
HOXC4-202ENST00000430889 RPL39P62891 51 aaKnown RBP10.17□□□□□ -0.78
HOXC4-202ENST00000430889 UBE2V1Q13404 147 aa10.17□□□□□ -0.78
HOXC4-202ENST00000430889 TMEM141Q96I45 108 aa10.17□□□□□ -0.78
HOXC4-202ENST00000430889 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
HOXC4-202ENST00000430889 A0A1W2PRX2 142 aa10.16□□□□□ -0.78
HOXC4-202ENST00000430889 M0R2P5 195 aa10.16□□□□□ -0.78
HOXC4-202ENST00000430889 PRM2P04554 102 aa10.16□□□□□ -0.78
HOXC4-202ENST00000430889 P0DMU3 169 aa10.16□□□□□ -0.78
HOXC4-202ENST00000430889 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
HOXC4-202ENST00000430889 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
HOXC4-202ENST00000430889 ZNF415Q09FC8 603 aa10.16□□□□□ -0.78
HOXC4-202ENST00000430889 C11orf44Q8N8P7 122 aa10.16□□□□□ -0.78
HOXC4-202ENST00000430889 ADARB2-AS1A8MUL3 147 aa10.15□□□□□ -0.78
HOXC4-202ENST00000430889 HILS1P60008 231 aa10.15□□□□□ -0.78
HOXC4-202ENST00000430889 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
HOXC4-202ENST00000430889 NDUFA7O95182 113 aa10.15□□□□□ -0.79
HOXC4-202ENST00000430889 INSP01308 110 aa10.15□□□□□ -0.79
HOXC4-202ENST00000430889 BEAN1Q3B7T3 259 aa10.15□□□□□ -0.79
HOXC4-202ENST00000430889 UNC79Q9P2D8 2635 aa10.14□□□□□ -0.79
HOXC4-202ENST00000430889 A8MWV9 139 aa10.14□□□□□ -0.79
HOXC4-202ENST00000430889 E9PLD3 99 aa10.14□□□□□ -0.79
HOXC4-202ENST00000430889 H3BRM9 83 aa10.14□□□□□ -0.79
HOXC4-202ENST00000430889 PMVKQ15126 192 aa10.14□□□□□ -0.79
HOXC4-202ENST00000430889 IL17DQ8TAD2 202 aa10.14□□□□□ -0.79
HOXC4-202ENST00000430889 CST9LQ9H4G1 147 aa10.14□□□□□ -0.79
HOXC4-202ENST00000430889 ACANP16112 2415 aa10.14□□□□□ -0.79
HOXC4-202ENST00000430889 A6NDN8 102 aa10.13□□□□□ -0.79
HOXC4-202ENST00000430889 I3L3M4 83 aa10.13□□□□□ -0.79
HOXC4-202ENST00000430889 PROK1P58294 105 aa10.13□□□□□ -0.79
HOXC4-202ENST00000430889 SCGB2A2Q13296 93 aa10.13□□□□□ -0.79
HOXC4-202ENST00000430889 DEFB104AQ8WTQ1 72 aa10.13□□□□□ -0.79
HOXC4-202ENST00000430889 SPXQ9BT56 116 aa10.13□□□□□ -0.79
HOXC4-202ENST00000430889 TRAV8-6A0A0B4J262 113 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 C11orf86A6NJI1 115 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 CFAP126Q5VTH2 177 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 C20orf203Q8NBC4 194 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 TM2D2Q9BX73 214 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 HTN1P15515 57 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 PTTG1IPP53801 180 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 FXYD2P54710 66 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 PAPPA-AS1Q5QFB9 102 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 Q6ZSN1 163 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 LINC01587Q99440 93 aa10.12□□□□□ -0.79
HOXC4-202ENST00000430889 SETXQ7Z333 2677 aaKnown RBP10.12□□□□□ -0.79
HOXC4-202ENST00000430889 OR11H12B2RN74 326 aa10.11□□□□□ -0.79
HOXC4-202ENST00000430889 RS1O15537 224 aa10.11□□□□□ -0.79
HOXC4-202ENST00000430889 TAL2Q16559 108 aa10.11□□□□□ -0.79
HOXC4-202ENST00000430889 ZNF418Q8TF45 676 aaPredicted RBP10.11□□□□□ -0.79
HOXC4-202ENST00000430889 FAM110AQ9BQ89 295 aa10.11□□□□□ -0.79
HOXC4-202ENST00000430889 WNK1Q9H4A3 2382 aa10.11□□□□□ -0.79
HOXC4-202ENST00000430889 MYMXA0A1B0GTQ4 84 aa10.1□□□□□ -0.79
HOXC4-202ENST00000430889 C9orf118A6NHY6 69 aa10.1□□□□□ -0.79
HOXC4-202ENST00000430889 STHQ8IWL8 128 aa10.1□□□□□ -0.79
HOXC4-202ENST00000430889 OR11H2Q8NH07 326 aa10.1□□□□□ -0.79
HOXC4-202ENST00000430889 FAM104AQ969W3 186 aa10.1□□□□□ -0.79
HOXC4-202ENST00000430889 PRADC1Q9BSG0 188 aa10.1□□□□□ -0.79
HOXC4-202ENST00000430889 C19orf73Q9NVV2 129 aa10.1□□□□□ -0.79
HOXC4-202ENST00000430889 TRBV7-3A0A075B6L6 115 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 IGHV3-73A0A0B4J1V6 119 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 K7EP13 123 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 RHODO00212 210 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 IGLV1-51P01701 117 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 IGHV3-53P01767 116 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 AZU1P20160 251 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 VAMP3Q15836 100 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 NFE4Q86UQ8 179 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 CEND1Q8N111 149 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 PHLDA1Q8WV24 401 aaPredicted RBP10.09□□□□□ -0.79
HOXC4-202ENST00000430889 XCL2Q9UBD3 114 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 Q9UF83 564 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 GIG44P09565 113 aaPredicted RBP10.09□□□□□ -0.79
HOXC4-202ENST00000430889 AMMECR1LQ6DCA0 310 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 ZNRF2Q8NHG8 242 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 PYGO1Q9Y3Y4 419 aa10.09□□□□□ -0.79
HOXC4-202ENST00000430889 IGLV4-3A0A075B6K6 122 aa10.08□□□□□ -0.8
HOXC4-202ENST00000430889 CMC4P56277 68 aaPredicted RBP10.08□□□□□ -0.8
HOXC4-202ENST00000430889 RNASE8Q8TDE3 154 aaKnown RBP10.08□□□□□ -0.8
HOXC4-202ENST00000430889 SMR3AQ99954 134 aa10.08□□□□□ -0.8
HOXC4-202ENST00000430889 MRPL16Q9NX20 251 aaKnown RBP10.08□□□□□ -0.8
HOXC4-202ENST00000430889 GCSHP23434 173 aa10.07□□□□□ -0.8
HOXC4-202ENST00000430889 OPRPNQ99935 248 aaPredicted RBP10.07□□□□□ -0.8
HOXC4-202ENST00000430889 DNAJC30Q96LL9 226 aa10.06□□□□□ -0.8
HOXC4-202ENST00000430889 AMELXQ99217 191 aa10.06□□□□□ -0.8
HOXC4-202ENST00000430889 EMP1P54849 157 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms