RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738		Q6ZSA8	131 aa		11.67	□□□□□ -0.54
MRPL28-203	ENST00000429738	BAALC	Q8WXS3	180 aa		11.67	□□□□□ -0.54
MRPL28-203	ENST00000429738	C19orf71	A6NCJ1	209 aa		11.66	□□□□□ -0.54
MRPL28-203	ENST00000429738	IGLC6	P0CF74	106 aa		11.66	□□□□□ -0.54
MRPL28-203	ENST00000429738	SMIM12	Q96EX1	92 aa		11.66	□□□□□ -0.54
MRPL28-203	ENST00000429738	VAX2	Q9UIW0	290 aa		11.66	□□□□□ -0.54
MRPL28-203	ENST00000429738	IGKV2D-24	A0A075B6R9	120 aa		11.65	□□□□□ -0.54
MRPL28-203	ENST00000429738	TEX46	H3BTG2	121 aa		11.65	□□□□□ -0.54
MRPL28-203	ENST00000429738	MEF2B	Q02080	365 aa	Predicted RBP	11.65	□□□□□ -0.54
MRPL28-203	ENST00000429738	UBE2W	Q96B02	151 aa		11.65	□□□□□ -0.54
MRPL28-203	ENST00000429738	AP1S3	Q96PC3	154 aa		11.65	□□□□□ -0.54
MRPL28-203	ENST00000429738	RBFOX3	A6NFN3	312 aa		11.64	□□□□□ -0.55
MRPL28-203	ENST00000429738	PLA2G1B	P04054	148 aa	Known RBP	11.64	□□□□□ -0.55
MRPL28-203	ENST00000429738	GZMB	P10144	247 aa		11.64	□□□□□ -0.55
MRPL28-203	ENST00000429738	KCNIP4	Q6PIL6	250 aa		11.64	□□□□□ -0.55
MRPL28-203	ENST00000429738	AKAP14	Q86UN6	197 aa		11.64	□□□□□ -0.55
MRPL28-203	ENST00000429738	TRBV20OR9-2	A0A075B6H5	130 aa		11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738	RAB19	A4D1S5	217 aa		11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738		F5H697	171 aa		11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738	PDE6D	O43924	150 aa		11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738	RPS20	P60866	119 aa	Known RBP	11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738	SST	P61278	116 aa		11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738		Q0VG73	95 aa		11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738	MPV17L2	Q567V2	206 aa		11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738	ENHO	Q6UWT2	76 aa		11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738	NTM-AS1	Q6ZSK4	140 aa		11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738	SLC51B	Q86UW2	128 aa		11.63	□□□□□ -0.55
MRPL28-203	ENST00000429738	SMIM17	P0DL12	118 aa		11.62	□□□□□ -0.55
MRPL28-203	ENST00000429738	BCL2	P10415	239 aa		11.62	□□□□□ -0.55
MRPL28-203	ENST00000429738	GNG4	P50150	75 aa		11.62	□□□□□ -0.55
MRPL28-203	ENST00000429738		Q8N976	141 aa		11.62	□□□□□ -0.55
MRPL28-203	ENST00000429738	FER1L6-AS1	Q8NA97	138 aa		11.62	□□□□□ -0.55
MRPL28-203	ENST00000429738	OR2D3	Q8NGH3	330 aa		11.62	□□□□□ -0.55
MRPL28-203	ENST00000429738	DAZAP1	Q96EP5	407 aa	Known RBP	11.62	□□□□□ -0.55
MRPL28-203	ENST00000429738	TMEM262	E9PQX1	116 aa		11.61	□□□□□ -0.55
MRPL28-203	ENST00000429738	IFNA1	P01562	189 aa		11.61	□□□□□ -0.55
MRPL28-203	ENST00000429738	TMEM97	Q5BJF2	176 aa		11.61	□□□□□ -0.55
MRPL28-203	ENST00000429738	SERTAD4-AS1	Q5TG53	156 aa		11.61	□□□□□ -0.55
MRPL28-203	ENST00000429738	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPL28-203	ENST00000429738	DEFB104A	Q8WTQ1	72 aa		11.61	□□□□□ -0.55
MRPL28-203	ENST00000429738	LRP1	Q07954	4544 aa	Known RBP	11.6	□□□□□ -0.55
MRPL28-203	ENST00000429738		M0QY20	66 aa		11.6	□□□□□ -0.55
MRPL28-203	ENST00000429738	PKIA	P61925	76 aa		11.6	□□□□□ -0.55
MRPL28-203	ENST00000429738	CACNG7	P62955	275 aa		11.6	□□□□□ -0.55
MRPL28-203	ENST00000429738	MED9	Q9NWA0	146 aa		11.6	□□□□□ -0.55
MRPL28-203	ENST00000429738	HMCN2	Q8NDA2	5059 aa		11.6	□□□□□ -0.55
MRPL28-203	ENST00000429738	C15orf54	Q8N8G6	183 aa		11.59	□□□□□ -0.55
MRPL28-203	ENST00000429738	CHCHD5	Q9BSY4	110 aa		11.59	□□□□□ -0.55
MRPL28-203	ENST00000429738	TPPP3	Q9BW30	176 aa		11.59	□□□□□ -0.55
MRPL28-203	ENST00000429738	C1orf43	Q9BWL3	253 aa		11.59	□□□□□ -0.55
MRPL28-203	ENST00000429738	XKRY2	A2RUG3	117 aa		11.58	□□□□□ -0.56
MRPL28-203	ENST00000429738		F2Z2F3	143 aa		11.58	□□□□□ -0.56
MRPL28-203	ENST00000429738		P01737	135 aa		11.58	□□□□□ -0.56
MRPL28-203	ENST00000429738	LINC00528	Q8N1L1	170 aa		11.58	□□□□□ -0.56
MRPL28-203	ENST00000429738	BIN3	Q9NQY0	253 aa		11.58	□□□□□ -0.56
MRPL28-203	ENST00000429738	PRR34	Q9NV39	138 aa		11.58	□□□□□ -0.56
MRPL28-203	ENST00000429738	CRP	P02741	224 aa		11.57	□□□□□ -0.56
MRPL28-203	ENST00000429738	ANG	P03950	147 aa	Known RBP	11.57	□□□□□ -0.56
MRPL28-203	ENST00000429738	TAGLN2	P37802	199 aa	Known RBP	11.57	□□□□□ -0.56
MRPL28-203	ENST00000429738	IQCJ	Q1A5X6	159 aa		11.57	□□□□□ -0.56
MRPL28-203	ENST00000429738	LINC01620	Q4KN68	170 aa		11.57	□□□□□ -0.56
MRPL28-203	ENST00000429738	SUMO4	Q6EEV6	95 aa		11.57	□□□□□ -0.56
MRPL28-203	ENST00000429738	UBR4	Q5T4S7	5183 aa		11.57	□□□□□ -0.56
MRPL28-203	ENST00000429738	TRBV25-1	A0A075B6N4	114 aa		11.56	□□□□□ -0.56
MRPL28-203	ENST00000429738		H7C1H1	209 aa		11.56	□□□□□ -0.56
MRPL28-203	ENST00000429738	MGP	P08493	103 aa		11.56	□□□□□ -0.56
MRPL28-203	ENST00000429738	MIA	Q16674	131 aa		11.56	□□□□□ -0.56
MRPL28-203	ENST00000429738	LYZL1	Q6UWQ5	148 aa		11.56	□□□□□ -0.56
MRPL28-203	ENST00000429738	C9orf62	Q8N4C0	152 aa		11.56	□□□□□ -0.56
MRPL28-203	ENST00000429738	CNFN	Q9BYD5	112 aa		11.56	□□□□□ -0.56
MRPL28-203	ENST00000429738	CTRL	P40313	264 aa		11.55	□□□□□ -0.56
MRPL28-203	ENST00000429738	RBX1	P62877	108 aa		11.55	□□□□□ -0.56
MRPL28-203	ENST00000429738	C14orf177	Q52M58	125 aa		11.55	□□□□□ -0.56
MRPL28-203	ENST00000429738	WDR73	Q6P4I2	378 aa		11.55	□□□□□ -0.56
MRPL28-203	ENST00000429738	NUDT10	Q8NFP7	164 aa		11.55	□□□□□ -0.56
MRPL28-203	ENST00000429738	NUDT11	Q96G61	164 aa		11.55	□□□□□ -0.56
MRPL28-203	ENST00000429738	FAT3	Q8TDW7	4589 aa		11.54	□□□□□ -0.56
MRPL28-203	ENST00000429738	IGHV1-24	A0A0C4DH33	117 aa		11.54	□□□□□ -0.56
MRPL28-203	ENST00000429738	TRGC1	P0CF51	173 aa		11.54	□□□□□ -0.56
MRPL28-203	ENST00000429738	NTF3	P20783	257 aa		11.54	□□□□□ -0.56
MRPL28-203	ENST00000429738	GAGE6	Q13070	117 aa		11.54	□□□□□ -0.56
MRPL28-203	ENST00000429738	KRTAP26-1	Q6PEX3	210 aa		11.54	□□□□□ -0.56
MRPL28-203	ENST00000429738	SCX	Q7RTU7	201 aa		11.54	□□□□□ -0.56
MRPL28-203	ENST00000429738	DPH3P1	Q9H4G8	78 aa		11.54	□□□□□ -0.56
MRPL28-203	ENST00000429738		K7EN84	100 aa		11.53	□□□□□ -0.56
MRPL28-203	ENST00000429738	RASL11A	Q6T310	242 aa		11.53	□□□□□ -0.56
MRPL28-203	ENST00000429738	NKX2-5	P52952	324 aa	Predicted RBP	11.52	□□□□□ -0.57
MRPL28-203	ENST00000429738	LINC00269	Q8N2A0	174 aa		11.52	□□□□□ -0.57
MRPL28-203	ENST00000429738	LYPD6B	Q8NI32	183 aa		11.52	□□□□□ -0.57
MRPL28-203	ENST00000429738	OCC1	Q8TAD7	63 aa		11.52	□□□□□ -0.57
MRPL28-203	ENST00000429738	USP17L23	D6RBM5	183 aa		11.51	□□□□□ -0.57
MRPL28-203	ENST00000429738	PGLYRP4	Q96LB8	373 aa		11.51	□□□□□ -0.57
MRPL28-203	ENST00000429738	CHAC1	Q9BUX1	264 aa		11.51	□□□□□ -0.57
MRPL28-203	ENST00000429738	RNASE7	Q9H1E1	156 aa	Known RBP	11.51	□□□□□ -0.57
MRPL28-203	ENST00000429738	RPP21	Q9H633	154 aa	Known RBP	11.51	□□□□□ -0.57
MRPL28-203	ENST00000429738	NIT2	Q9NQR4	276 aa		11.51	□□□□□ -0.57
MRPL28-203	ENST00000429738		A0A1B0GUV1	79 aa		11.5	□□□□□ -0.57
MRPL28-203	ENST00000429738	TMEM250	H0YL14	139 aa		11.5	□□□□□ -0.57
MRPL28-203	ENST00000429738	HLA-DQA1	P01909	254 aa		11.5	□□□□□ -0.57

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