RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 P01737 135 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRACP01848 142 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 SLC25A5P05141 298 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 SRP19P09132 144 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 LGALS1P09382 135 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 BCL2P10415 239 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 VDAC1P21796 283 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 PPP1CCP36873 323 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 MTPNP58546 118 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF90Q03938 601 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 IL15RAQ13261 267 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 VMA21Q3ZAQ7 101 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 Q499Y3 187 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 LCN12Q6JVE5 192 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF322Q6U7Q0 402 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 GAPTQ8N292 157 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 C3orf22Q8N5N4 141 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 ANKRD29Q8N6D5 301 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 TPRX1Q8N7U7 411 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 C5orf56Q8N8D9 126 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM213BQ8TBF2 198 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 MRPL30Q8TCC3 161 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 C18orf32Q8TCD1 76 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 PPDPFLQ8WWR9 84 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 AQP3Q92482 292 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM104AQ969W3 186 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 KCNS1Q96KK3 526 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM103A1Q9BTL3 118 aaKnown RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 TMEM147Q9BVK8 224 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 COMMD5Q9GZQ3 224 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 PBOV1Q9GZY1 135 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 VSIRQ9H7M9 311 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 LAMTOR3Q9UHA4 124 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 LINC00527Q9UJ94 153 aa3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 AMMECR1Q9Y4X0 333 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRBV6-7A0A0A0MS04 114 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 A0A0U1RQV1 116 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 C3orf85A0A1B0GTC6 90 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM236AA0A1B0GUQ0 79 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM236BA0A1B0GV22 79 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 GRIFINA4D1Z8 144 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 NCBP2LA6PVI3 153 aaKnown RBP3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 C12orf77C9JDV5 145 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 H3BMG7 143 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 SYS1-DBNDD2H3BUS1 97 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 H7C1H1 209 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 J3QQQ9 107 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 M0R129 80 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF861PO60384 105 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 SERF1AO75920 110 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF688P0C7X2 276 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 SMIM13P0DJ93 91 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 SSBP1Q04837 148 aaKnown RBP3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 SLC25A48Q6ZT89 311 aaKnown RBP3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 TMEM179BQ7Z7N9 219 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRAPPC6BQ86SZ2 158 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 TMEM256Q8N2U0 113 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 OR9G1Q8NH87 305 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 OTOSQ8NHW6 89 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 COPS9Q8WXC6 57 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 EEF1AKMT3Q96AZ1 226 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 BORCS8Q96FH0 119 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 PRELID3AQ96N28 172 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 C20orf78Q9BR46 151 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 AGMATQ9BSE5 352 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 NRN1Q9NPD7 142 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 CYTL1Q9NRR1 136 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 KLK5Q9Y337 293 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 ARL2-SNX15V9GYD0 113 aa3.05□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRAV9-1A0A075B6T8 112 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 A0A0A6YYD4 124 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRAV13-1A0A0B4J241 112 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM240AA0A1B0GVK7 77 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 FAM24AA6NFZ4 105 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 LINC01619G3V211 115 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 LY6LH3BQJ8 138 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 J3QT63 122 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 FFAR1O14842 300 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF737O75373 536 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 PSMB8P28062 276 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 RPS27P42677 84 aaKnown RBP3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 SMIM11AP58511 58 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 SNRPGP62308 76 aaKnown RBP3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 ETDBQ3ZM63 59 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 RPL7L1Q6DKI1 246 aaKnown RBP3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 LGALS9CQ6DKI2 356 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 AMTNQ6UX39 209 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 ATOH7Q8N100 152 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 C1orf158Q8N1D5 194 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 EXOC3-AS1Q8N2X6 119 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 OR10G2Q8NGC3 310 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 DLX4Q92988 240 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 TMEM59Q9BXS4 323 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 C21orf62Q9NYP8 219 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 MTFP1Q9UDX5 166 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 KLHDC2Q9Y2U9 406 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 PXMP4Q9Y6I8 212 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 VPS13DQ5THJ4 4388 aa3.04□□□□□ -1.92
HMGB3P5-201ENST00000428894 TRAV26-2A0A0B4J265 109 aa3.03□□□□□ -1.92
HMGB3P5-201ENST00000428894 ZNF324O75467 553 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms