RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 FAM231CP0DMU5 169 aa8.77□□□□□ -1.01
TRIM39-207ENST00000428404 PRO0255Q9UI72 69 aa8.77□□□□□ -1.01
TRIM39-207ENST00000428404 F5H768 121 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST1H2BKO60814 126 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST1H2BJP06899 126 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST1H2BOP23527 126 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST1H2BBP33778 126 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST1H2BDP58876 126 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST1H2BCP62807 126 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 RPL32P62910 135 aaKnown RBP8.76□□□□□ -1.01
TRIM39-207ENST00000428404 RHOHQ15669 191 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST2H2BEQ16778 126 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.76□□□□□ -1.01
TRIM39-207ENST00000428404 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 C18orf32Q8TCD1 76 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST1H2BHQ93079 126 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 VSIG2Q96IQ7 327 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 DNAJC30Q96LL9 226 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST1H2BNQ99877 126 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 HIST1H2BMQ99879 126 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 C20orf78Q9BR46 151 aa8.76□□□□□ -1.01
TRIM39-207ENST00000428404 DNAH7Q8WXX0 4024 aa8.75□□□□□ -1.01
TRIM39-207ENST00000428404 HTN3P15516 51 aa8.75□□□□□ -1.01
TRIM39-207ENST00000428404 POLR2KP53803 58 aaKnown RBP8.75□□□□□ -1.01
TRIM39-207ENST00000428404 Q0VG73 95 aa8.75□□□□□ -1.01
TRIM39-207ENST00000428404 OR10J3Q5JRS4 329 aa8.75□□□□□ -1.01
TRIM39-207ENST00000428404 DYNC2H1Q8NCM8 4307 aaKnown RBP8.74□□□□□ -1.01
TRIM39-207ENST00000428404 IGLV2-18A0A075B6J9 118 aa8.74□□□□□ -1.01
TRIM39-207ENST00000428404 DEFB131BA0A096LNP1 70 aa8.74□□□□□ -1.01
TRIM39-207ENST00000428404 PAX4O43316 350 aa8.74□□□□□ -1.01
TRIM39-207ENST00000428404 LINC00694P0DN24 101 aa8.74□□□□□ -1.01
TRIM39-207ENST00000428404 SUMO2P61956 95 aaKnown RBP8.74□□□□□ -1.01
TRIM39-207ENST00000428404 PRADC1Q9BSG0 188 aa8.74□□□□□ -1.01
TRIM39-207ENST00000428404 TMEM70Q9BUB7 260 aa8.74□□□□□ -1.01
TRIM39-207ENST00000428404 ST20Q9HBF5 79 aa8.74□□□□□ -1.01
TRIM39-207ENST00000428404 TRBV7-3A0A075B6L6 115 aa8.73□□□□□ -1.01
TRIM39-207ENST00000428404 TRAV26-1A0A087WT03 109 aa8.73□□□□□ -1.01
TRIM39-207ENST00000428404 TRAV10A0A0B4J240 114 aa8.73□□□□□ -1.01
TRIM39-207ENST00000428404 LOC100131303A0A0U1RQF7 123 aa8.73□□□□□ -1.01
TRIM39-207ENST00000428404 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
TRIM39-207ENST00000428404 H3BNG1 76 aa8.73□□□□□ -1.01
TRIM39-207ENST00000428404 RAB5BP61020 215 aa8.73□□□□□ -1.01
TRIM39-207ENST00000428404 MAP1LC3AQ9H492 121 aa8.73□□□□□ -1.01
TRIM39-207ENST00000428404 TNFRSF18Q9Y5U5 241 aa8.73□□□□□ -1.01
TRIM39-207ENST00000428404 TRBV27A0A0K0K1C4 114 aa8.72□□□□□ -1.01
TRIM39-207ENST00000428404 VCYO14598 125 aa8.72□□□□□ -1.01
TRIM39-207ENST00000428404 GYPEP15421 78 aa8.72□□□□□ -1.01
TRIM39-207ENST00000428404 UBE2D3P61077 147 aa8.72□□□□□ -1.01
TRIM39-207ENST00000428404 UBE2D2P62837 147 aa8.72□□□□□ -1.01
TRIM39-207ENST00000428404 RPL36AP83881 106 aaKnown RBP8.72□□□□□ -1.01
TRIM39-207ENST00000428404 IQCJQ1A5X6 159 aa8.72□□□□□ -1.01
TRIM39-207ENST00000428404 COA6Q5JTJ3 125 aaKnown RBP8.72□□□□□ -1.01
TRIM39-207ENST00000428404 ZNRF2Q8NHG8 242 aa8.72□□□□□ -1.01
TRIM39-207ENST00000428404 RPL36ALQ969Q0 106 aaKnown RBP8.72□□□□□ -1.01
TRIM39-207ENST00000428404 A0A0J9YY99 117 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 LOC389332A0A1B0GUA5 103 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 GAGE12JA6NER3 117 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 LINC01546A6NGU7 62 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 IFI27P40305 119 aaPredicted RBP8.71□□□□□ -1.02
TRIM39-207ENST00000428404 GAGE1Q13065 139 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 GAGE4Q13068 117 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 GAGE5Q13069 117 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 GAGE13Q4V321 117 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 Q8N8P6 123 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.02
TRIM39-207ENST00000428404 URB1-AS1Q96HZ7 61 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
TRIM39-207ENST00000428404 NXT2Q9NPJ8 142 aaKnown RBP8.71□□□□□ -1.02
TRIM39-207ENST00000428404 PMCHP20382 165 aa8.7□□□□□ -1.02
TRIM39-207ENST00000428404 LINC00310P59036 64 aa8.7□□□□□ -1.02
TRIM39-207ENST00000428404 NIT1Q86X76 327 aa8.7□□□□□ -1.02
TRIM39-207ENST00000428404 A0A096LPF7 62 aa8.69□□□□□ -1.02
TRIM39-207ENST00000428404 I3L3M4 83 aa8.69□□□□□ -1.02
TRIM39-207ENST00000428404 MRPL23Q16540 153 aaKnown RBP8.69□□□□□ -1.02
TRIM39-207ENST00000428404 NEGR1Q7Z3B1 354 aa8.69□□□□□ -1.02
TRIM39-207ENST00000428404 DAZ4Q86SG3 579 aaKnown RBP8.69□□□□□ -1.02
TRIM39-207ENST00000428404 BAGE3Q86Y29 109 aa8.69□□□□□ -1.02
TRIM39-207ENST00000428404 PRSS3P2Q8NHM4 247 aa8.69□□□□□ -1.02
TRIM39-207ENST00000428404 DAZ3Q9NR90 486 aaKnown RBP8.69□□□□□ -1.02
TRIM39-207ENST00000428404 TSHBP01222 138 aa8.68□□□□□ -1.02
TRIM39-207ENST00000428404 LINC00614P0C842 121 aa8.68□□□□□ -1.02
TRIM39-207ENST00000428404 CHCHD1Q96BP2 118 aaKnown RBP8.68□□□□□ -1.02
TRIM39-207ENST00000428404 K7EMI3 77 aa8.67□□□□□ -1.02
TRIM39-207ENST00000428404 NUPR1O60356 82 aa8.67□□□□□ -1.02
TRIM39-207ENST00000428404 SERF1AO75920 110 aa8.67□□□□□ -1.02
TRIM39-207ENST00000428404 ESDP10768 282 aa8.67□□□□□ -1.02
TRIM39-207ENST00000428404 NDUFA6P56556 154 aa8.67□□□□□ -1.02
TRIM39-207ENST00000428404 SH2D6Q7Z4S9 175 aa8.67□□□□□ -1.02
TRIM39-207ENST00000428404 ATP6V0E2Q8NHE4 81 aa8.67□□□□□ -1.02
TRIM39-207ENST00000428404 ICOSQ9Y6W8 199 aa8.67□□□□□ -1.02
TRIM39-207ENST00000428404 IGHV3-38A0A0C4DH36 116 aa8.66□□□□□ -1.02
TRIM39-207ENST00000428404 TCAPO15273 167 aa8.66□□□□□ -1.02
TRIM39-207ENST00000428404 CEMP1Q6PRD7 247 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-207ENST00000428404 NTM-AS1Q6ZSK4 140 aa8.66□□□□□ -1.02
TRIM39-207ENST00000428404 FA2HQ7L5A8 372 aa8.66□□□□□ -1.02
TRIM39-207ENST00000428404 KIR2DL4Q99706 377 aa8.66□□□□□ -1.02
TRIM39-207ENST00000428404 GTSF1LQ9H1H1 148 aa8.66□□□□□ -1.02
TRIM39-207ENST00000428404 AP5S1Q9NUS5 200 aa8.66□□□□□ -1.02
TRIM39-207ENST00000428404 TIRAPP58753 221 aa8.65□□□□□ -1.02
TRIM39-207ENST00000428404 LAGE3Q14657 143 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms