RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 IGKCP01834 107 aa7.56□□□□□ -1.2
HDAC9-210ENST00000428307 NMUP48645 174 aa7.56□□□□□ -1.2
HDAC9-210ENST00000428307 ZFP2Q6ZN57 461 aa7.56□□□□□ -1.2
HDAC9-210ENST00000428307 TRBV27A0A0K0K1C4 114 aa7.56□□□□□ -1.2
HDAC9-210ENST00000428307 COX8AP10176 69 aa7.56□□□□□ -1.2
HDAC9-210ENST00000428307 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
HDAC9-210ENST00000428307 CLUHP3Q96NS8 147 aa7.56□□□□□ -1.2
HDAC9-210ENST00000428307 ZMAT4Q9H898 229 aa7.56□□□□□ -1.2
HDAC9-210ENST00000428307 Q9UF83 564 aa7.56□□□□□ -1.2
HDAC9-210ENST00000428307 TP53TG1Q9Y2A0 90 aa7.56□□□□□ -1.2
HDAC9-210ENST00000428307 TRBV6-5A0A0K0K1A5 114 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 DPM2O94777 84 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 GTSCR1Q86UQ5 136 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 C19orf73Q9NVV2 129 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 CYSLTR1Q9Y271 337 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 A0A087WX48 190 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 A8MWV9 139 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 RPL32P62910 135 aaKnown RBP7.55□□□□□ -1.2
HDAC9-210ENST00000428307 BEAN1Q3B7T3 259 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 MPV17L2Q567V2 206 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 ZC2HC1BQ5TFG8 222 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 CFAP126Q5VTH2 177 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 Q6ZSN1 163 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 ERASQ7Z444 233 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 MRPL52Q86TS9 123 aaKnown RBP7.55□□□□□ -1.2
HDAC9-210ENST00000428307 PCP2Q8IVA1 136 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 SPATA3Q8NHX4 192 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 F8P00451 2351 aa7.55□□□□□ -1.2
HDAC9-210ENST00000428307 CRLF1O75462 422 aa7.54□□□□□ -1.2
HDAC9-210ENST00000428307 GIG44P09565 113 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-210ENST00000428307 LINC00482Q8N8I6 264 aa7.54□□□□□ -1.2
HDAC9-210ENST00000428307 TTTY13Q9BZ97 58 aa7.54□□□□□ -1.2
HDAC9-210ENST00000428307 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
HDAC9-210ENST00000428307 CMC4P56277 68 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-210ENST00000428307 NEXN-AS1Q8NBZ9 246 aa7.54□□□□□ -1.2
HDAC9-210ENST00000428307 BAALCQ8WXS3 180 aa7.54□□□□□ -1.2
HDAC9-210ENST00000428307 LINC00467Q9BRT7 94 aa7.54□□□□□ -1.2
HDAC9-210ENST00000428307 FGF6P10767 208 aa7.53□□□□□ -1.2
HDAC9-210ENST00000428307 FOSL1P15407 271 aa7.53□□□□□ -1.2
HDAC9-210ENST00000428307 UFSP1Q6NVU6 142 aa7.53□□□□□ -1.2
HDAC9-210ENST00000428307 SPXQ9BT56 116 aa7.53□□□□□ -1.2
HDAC9-210ENST00000428307 TRGV1A0A0A0MS02 117 aa7.53□□□□□ -1.2
HDAC9-210ENST00000428307 PRSS29PA6NIE9 313 aa7.53□□□□□ -1.2
HDAC9-210ENST00000428307 H7C1H1 209 aa7.53□□□□□ -1.2
HDAC9-210ENST00000428307 COL5A1-AS1Q5SY13 56 aa7.53□□□□□ -1.2
HDAC9-210ENST00000428307 CHTOPQ9Y3Y2 248 aaKnown RBP7.53□□□□□ -1.2
HDAC9-210ENST00000428307 IGIPA6NJ69 53 aa7.52□□□□□ -1.21
HDAC9-210ENST00000428307 F8VRH5 84 aa7.52□□□□□ -1.21
HDAC9-210ENST00000428307 I3L3M4 83 aa7.52□□□□□ -1.21
HDAC9-210ENST00000428307 TSHBP01222 138 aa7.52□□□□□ -1.21
HDAC9-210ENST00000428307 C2orf91Q6ZV80 131 aa7.52□□□□□ -1.21
HDAC9-210ENST00000428307 BOD1L2Q8IYS8 172 aa7.52□□□□□ -1.21
HDAC9-210ENST00000428307 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-210ENST00000428307 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
HDAC9-210ENST00000428307 TRAV12-1A0A0B4J245 112 aa7.52□□□□□ -1.21
HDAC9-210ENST00000428307 G0S2P27469 103 aa7.52□□□□□ -1.21
HDAC9-210ENST00000428307 EMP1P54849 157 aa7.52□□□□□ -1.21
HDAC9-210ENST00000428307 RNASE8Q8TDE3 154 aaKnown RBP7.52□□□□□ -1.21
HDAC9-210ENST00000428307 OPRPNQ99935 248 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-210ENST00000428307 TRRAPQ9Y4A5 3859 aa7.51□□□□□ -1.21
HDAC9-210ENST00000428307 PIK3CD-AS1Q5SR53 167 aa7.51□□□□□ -1.21
HDAC9-210ENST00000428307 Q6ZTI0 123 aa7.51□□□□□ -1.21
HDAC9-210ENST00000428307 FAM110AQ9BQ89 295 aa7.51□□□□□ -1.21
HDAC9-210ENST00000428307 TEP1Q99973 2627 aaKnown RBP7.51□□□□□ -1.21
HDAC9-210ENST00000428307 NBEAL2Q6ZNJ1 2754 aa7.51□□□□□ -1.21
HDAC9-210ENST00000428307 IGHV3-53P01767 116 aa7.51□□□□□ -1.21
HDAC9-210ENST00000428307 PLNP26678 52 aa7.51□□□□□ -1.21
HDAC9-210ENST00000428307 LURAP1LQ8IV03 231 aa7.51□□□□□ -1.21
HDAC9-210ENST00000428307 NOP10Q9NPE3 64 aaKnown RBP7.51□□□□□ -1.21
HDAC9-210ENST00000428307 TRAV8-6A0A0B4J262 113 aa7.5□□□□□ -1.21
HDAC9-210ENST00000428307 RIPPLY3P57055 190 aa7.5□□□□□ -1.21
HDAC9-210ENST00000428307 Q6ZVH6 145 aa7.5□□□□□ -1.21
HDAC9-210ENST00000428307 OR4C5Q8NGB2 326 aa7.5□□□□□ -1.21
HDAC9-210ENST00000428307 TMEM263Q8WUH6 116 aaKnown RBP7.5□□□□□ -1.21
HDAC9-210ENST00000428307 PTH2Q96A98 100 aa7.5□□□□□ -1.21
HDAC9-210ENST00000428307 ZNF479Q96JC4 524 aa7.5□□□□□ -1.21
HDAC9-210ENST00000428307 IGHV3-38A0A0C4DH36 116 aa7.49□□□□□ -1.21
HDAC9-210ENST00000428307 RS1O15537 224 aa7.49□□□□□ -1.21
HDAC9-210ENST00000428307 BVES-AS1Q5T3Y7 98 aa7.49□□□□□ -1.21
HDAC9-210ENST00000428307 RHODO00212 210 aa7.49□□□□□ -1.21
HDAC9-210ENST00000428307 RHOHQ15669 191 aa7.49□□□□□ -1.21
HDAC9-210ENST00000428307 C12orf54Q6X4T0 127 aa7.49□□□□□ -1.21
HDAC9-210ENST00000428307 C20orf203Q8NBC4 194 aa7.49□□□□□ -1.21
HDAC9-210ENST00000428307 ZMAT5Q9UDW3 170 aaKnown RBP7.49□□□□□ -1.21
HDAC9-210ENST00000428307 NACAE9PAV3 2078 aa7.49□□□□□ -1.21
HDAC9-210ENST00000428307 PMVKQ15126 192 aa7.48□□□□□ -1.21
HDAC9-210ENST00000428307 CSNK1G2-AS1Q8NCQ2 148 aa7.48□□□□□ -1.21
HDAC9-210ENST00000428307 PHLDA1Q8WV24 401 aaPredicted RBP7.48□□□□□ -1.21
HDAC9-210ENST00000428307 TMEM141Q96I45 108 aa7.48□□□□□ -1.21
HDAC9-210ENST00000428307 TIMM17AQ99595 171 aa7.48□□□□□ -1.21
HDAC9-210ENST00000428307 C1QTNF4Q9BXJ3 329 aa7.48□□□□□ -1.21
HDAC9-210ENST00000428307 CST9LQ9H4G1 147 aa7.48□□□□□ -1.21
HDAC9-210ENST00000428307 EDA2RQ9HAV5 297 aa7.48□□□□□ -1.21
HDAC9-210ENST00000428307 ZNF25P17030 456 aaPredicted RBP7.48□□□□□ -1.21
HDAC9-210ENST00000428307 IL17DQ8TAD2 202 aa7.48□□□□□ -1.21
HDAC9-210ENST00000428307 LINC01549A6NIU2 74 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 DLEU1O43261 78 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 RRN3P1Q2M238 152 aa7.47□□□□□ -1.21
HDAC9-210ENST00000428307 CEMP1Q6PRD7 247 aaPredicted RBP7.47□□□□□ -1.21
HDAC9-210ENST00000428307 MAPKAPK5-AS1Q8N8E1 139 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms