RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 FRAS1Q86XX4 4008 aa12.16□□□□□ -0.46
MMP11-202ENST00000428253 H7C1H1 209 aa12.15□□□□□ -0.46
MMP11-202ENST00000428253 RASL11AQ6T310 242 aa12.15□□□□□ -0.46
MMP11-202ENST00000428253 BORCS7Q96B45 105 aa12.15□□□□□ -0.46
MMP11-202ENST00000428253 DNAJC30Q96LL9 226 aa12.15□□□□□ -0.46
MMP11-202ENST00000428253 SEC11CQ9BY50 192 aa12.15□□□□□ -0.46
MMP11-202ENST00000428253 TMEM191AQ9H0A3 160 aa12.15□□□□□ -0.46
MMP11-202ENST00000428253 A0A087WWC5 75 aa12.14□□□□□ -0.47
MMP11-202ENST00000428253 PPP1R2P9O14990 202 aa12.14□□□□□ -0.47
MMP11-202ENST00000428253 RIGQ13278 110 aa12.14□□□□□ -0.47
MMP11-202ENST00000428253 C10orf91Q5T1B1 145 aa12.14□□□□□ -0.47
MMP11-202ENST00000428253 SMIM15Q7Z3B0 74 aa12.14□□□□□ -0.47
MMP11-202ENST00000428253 GATD1Q8NB37 220 aa12.14□□□□□ -0.47
MMP11-202ENST00000428253 TRAV8-6A0A0B4J262 113 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 F8W036 122 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 K7EP13 123 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 BTF3P20290 206 aaKnown RBP12.13□□□□□ -0.47
MMP11-202ENST00000428253 LINC01556Q5JQF7 62 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 OR10J3Q5JRS4 329 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 C1orf134Q5TEV5 83 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 FRZBQ92765 325 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 ANAPC16Q96DE5 110 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 RNF185Q96GF1 192 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 NIT2Q9NQR4 276 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 DNAH17Q9UFH2 4485 aa12.13□□□□□ -0.47
MMP11-202ENST00000428253 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
MMP11-202ENST00000428253 MT-ND4LP03901 98 aa12.12□□□□□ -0.47
MMP11-202ENST00000428253 DAZ4Q86SG3 579 aaKnown RBP12.12□□□□□ -0.47
MMP11-202ENST00000428253 DAZ3Q9NR90 486 aaKnown RBP12.12□□□□□ -0.47
MMP11-202ENST00000428253 A0A1B0GXF2 115 aa12.11□□□□□ -0.47
MMP11-202ENST00000428253 NTM-AS1Q6ZSK4 140 aa12.11□□□□□ -0.47
MMP11-202ENST00000428253 C6orf223Q8N319 242 aa12.11□□□□□ -0.47
MMP11-202ENST00000428253 TNFRSF18Q9Y5U5 241 aa12.11□□□□□ -0.47
MMP11-202ENST00000428253 FAT2Q9NYQ8 4349 aa12.11□□□□□ -0.47
MMP11-202ENST00000428253 TRBV6-8A0A0A6YYG3 113 aa12.1□□□□□ -0.47
MMP11-202ENST00000428253 A0A1B0GW15 77 aa12.1□□□□□ -0.47
MMP11-202ENST00000428253 RAB4AP20338 218 aa12.1□□□□□ -0.47
MMP11-202ENST00000428253 LINC00336Q6ZUF6 198 aa12.1□□□□□ -0.47
MMP11-202ENST00000428253 CARHSP1Q9Y2V2 147 aaKnown RBP12.1□□□□□ -0.47
MMP11-202ENST00000428253 GAS8-AS1O95177 125 aa12.09□□□□□ -0.47
MMP11-202ENST00000428253 AMN1Q8IY45 258 aa12.09□□□□□ -0.47
MMP11-202ENST00000428253 TRAV9-2A0A087WT02 112 aa12.08□□□□□ -0.48
MMP11-202ENST00000428253 Q6ZRN7 208 aaPredicted RBP12.08□□□□□ -0.48
MMP11-202ENST00000428253 NIT1Q86X76 327 aa12.08□□□□□ -0.48
MMP11-202ENST00000428253 Q8N3U1 123 aa12.08□□□□□ -0.48
MMP11-202ENST00000428253 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
MMP11-202ENST00000428253 TRBV6-5A0A0K0K1A5 114 aa12.07□□□□□ -0.48
MMP11-202ENST00000428253 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
MMP11-202ENST00000428253 FAM104BQ5XKR9 115 aa12.07□□□□□ -0.48
MMP11-202ENST00000428253 ATP5L2Q7Z4Y8 100 aa12.07□□□□□ -0.48
MMP11-202ENST00000428253 C10orf126Q8N4M7 172 aa12.07□□□□□ -0.48
MMP11-202ENST00000428253 MRAP2Q96G30 205 aa12.07□□□□□ -0.48
MMP11-202ENST00000428253 IBA57-AS1B1ANH7 110 aa12.06□□□□□ -0.48
MMP11-202ENST00000428253 CAMPP49913 170 aa12.06□□□□□ -0.48
MMP11-202ENST00000428253 HBBP68871 147 aa12.06□□□□□ -0.48
MMP11-202ENST00000428253 MRPL54Q6P161 138 aaKnown RBP12.06□□□□□ -0.48
MMP11-202ENST00000428253 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.06□□□□□ -0.48
MMP11-202ENST00000428253 RPS10P46783 165 aaKnown RBP12.05□□□□□ -0.48
MMP11-202ENST00000428253 IQCJQ1A5X6 159 aa12.05□□□□□ -0.48
MMP11-202ENST00000428253 IMMP2LQ96T52 175 aa12.05□□□□□ -0.48
MMP11-202ENST00000428253 CTDSP1Q9GZU7 261 aa12.05□□□□□ -0.48
MMP11-202ENST00000428253 A0A1B0GVY2 172 aa12.04□□□□□ -0.48
MMP11-202ENST00000428253 PRSS29PA6NIE9 313 aa12.04□□□□□ -0.48
MMP11-202ENST00000428253 IGHV3-30P01768 117 aa12.04□□□□□ -0.48
MMP11-202ENST00000428253 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
MMP11-202ENST00000428253 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
MMP11-202ENST00000428253 IGHV3-30-5P0DP03 117 aa12.04□□□□□ -0.48
MMP11-202ENST00000428253 MRPL51Q4U2R6 128 aaKnown RBP12.04□□□□□ -0.48
MMP11-202ENST00000428253 CHCHD7Q9BUK0 85 aa12.04□□□□□ -0.48
MMP11-202ENST00000428253 S100A8P05109 93 aa12.03□□□□□ -0.48
MMP11-202ENST00000428253 NRACQ8N912 160 aa12.03□□□□□ -0.48
MMP11-202ENST00000428253 TMEM242Q9NWH2 141 aa12.03□□□□□ -0.48
MMP11-202ENST00000428253 SDHAF1A6NFY7 115 aa12.02□□□□□ -0.49
MMP11-202ENST00000428253 POLR2KP53803 58 aaKnown RBP12.02□□□□□ -0.49
MMP11-202ENST00000428253 EPPK1P58107 5090 aaKnown RBP12.02□□□□□ -0.49
MMP11-202ENST00000428253 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
MMP11-202ENST00000428253 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
MMP11-202ENST00000428253 C7orf77A4D0Y5 90 aa12.01□□□□□ -0.49
MMP11-202ENST00000428253 SMKR1H3BMG3 65 aa12.01□□□□□ -0.49
MMP11-202ENST00000428253 TNP2Q05952 138 aa12.01□□□□□ -0.49
MMP11-202ENST00000428253 LAGE3Q14657 143 aa12.01□□□□□ -0.49
MMP11-202ENST00000428253 CLRN3Q8NCR9 226 aa12.01□□□□□ -0.49
MMP11-202ENST00000428253 BTF3L4Q96K17 158 aa12.01□□□□□ -0.49
MMP11-202ENST00000428253 TMEM70Q9BUB7 260 aa12.01□□□□□ -0.49
MMP11-202ENST00000428253 NCR2O95944 276 aa12□□□□□ -0.49
MMP11-202ENST00000428253 KCNIP4Q6PIL6 250 aa12□□□□□ -0.49
MMP11-202ENST00000428253 NFE4Q86UQ8 179 aa12□□□□□ -0.49
MMP11-202ENST00000428253 ST20Q9HBF5 79 aa12□□□□□ -0.49
MMP11-202ENST00000428253 TRBV27A0A0K0K1C4 114 aa11.99□□□□□ -0.49
MMP11-202ENST00000428253 COTL1Q14019 142 aa11.99□□□□□ -0.49
MMP11-202ENST00000428253 RHEBQ15382 184 aa11.99□□□□□ -0.49
MMP11-202ENST00000428253 MPV17L2Q567V2 206 aa11.99□□□□□ -0.49
MMP11-202ENST00000428253 DEFB104AQ8WTQ1 72 aa11.99□□□□□ -0.49
MMP11-202ENST00000428253 CHCHD5Q9BSY4 110 aa11.99□□□□□ -0.49
MMP11-202ENST00000428253 TRBV24-1A0A075B6N3 115 aa11.98□□□□□ -0.49
MMP11-202ENST00000428253 TRAV9-1A0A075B6T8 112 aa11.98□□□□□ -0.49
MMP11-202ENST00000428253 A0A087WX48 190 aa11.98□□□□□ -0.49
MMP11-202ENST00000428253 PPP1R17O96001 155 aa11.98□□□□□ -0.49
MMP11-202ENST00000428253 PKIAP61925 76 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms