RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 LY6G6DO95868 133 aa10.22□□□□□ -0.77
APOBEC3D-202ENST00000427494 JMJD8Q96S16 334 aa10.22□□□□□ -0.77
APOBEC3D-202ENST00000427494 XCL2Q9UBD3 114 aa10.22□□□□□ -0.77
APOBEC3D-202ENST00000427494 SIVA1O15304 175 aa10.21□□□□□ -0.77
APOBEC3D-202ENST00000427494 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.77
APOBEC3D-202ENST00000427494 TMEM97Q5BJF2 176 aa10.21□□□□□ -0.77
APOBEC3D-202ENST00000427494 Q6ZVH6 145 aa10.21□□□□□ -0.77
APOBEC3D-202ENST00000427494 ANK3Q12955 4377 aaKnown RBP10.21□□□□□ -0.77
APOBEC3D-202ENST00000427494 LINC01549A6NIU2 74 aa10.21□□□□□ -0.78
APOBEC3D-202ENST00000427494 ADARB2-AS1A8MUL3 147 aa10.21□□□□□ -0.78
APOBEC3D-202ENST00000427494 A8MWV9 139 aa10.21□□□□□ -0.78
APOBEC3D-202ENST00000427494 RIPPLY3P57055 190 aa10.21□□□□□ -0.78
APOBEC3D-202ENST00000427494 PROK1P58294 105 aa10.21□□□□□ -0.78
APOBEC3D-202ENST00000427494 C11orf72Q8NBR9 251 aa10.21□□□□□ -0.78
APOBEC3D-202ENST00000427494 TTTY13Q9BZ97 58 aa10.21□□□□□ -0.78
APOBEC3D-202ENST00000427494 WNK1Q9H4A3 2382 aa10.21□□□□□ -0.78
APOBEC3D-202ENST00000427494 GCN1Q92616 2671 aaKnown RBP10.2□□□□□ -0.78
APOBEC3D-202ENST00000427494 PRSS29PA6NIE9 313 aa10.2□□□□□ -0.78
APOBEC3D-202ENST00000427494 COX11Q9Y6N1 276 aa10.2□□□□□ -0.78
APOBEC3D-202ENST00000427494 FASNP49327 2511 aaKnown RBP10.2□□□□□ -0.78
APOBEC3D-202ENST00000427494 PIK3CD-AS1Q5SR53 167 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 IGHV3OR16-12A0A075B7B8 117 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 IGIPA6NJ69 53 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 I3L3M4 83 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 TSHBP01222 138 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 HSD52Q0P140 79 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 GAGE1Q13065 139 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 RHOHQ15669 191 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 UFSP1Q6NVU6 142 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 ORAOV1Q8WV07 137 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 PTH2Q96A98 100 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 TMEM141Q96I45 108 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 SPXQ9BT56 116 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 EDA2RQ9HAV5 297 aa10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 MRPL16Q9NX20 251 aaKnown RBP10.19□□□□□ -0.78
APOBEC3D-202ENST00000427494 P0DMU3 169 aa10.18□□□□□ -0.78
APOBEC3D-202ENST00000427494 FAM231AP0DMU4 169 aa10.18□□□□□ -0.78
APOBEC3D-202ENST00000427494 FAM231CP0DMU5 169 aa10.18□□□□□ -0.78
APOBEC3D-202ENST00000427494 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
APOBEC3D-202ENST00000427494 TAX1BP3O14907 124 aa10.17□□□□□ -0.78
APOBEC3D-202ENST00000427494 IGLV1-51P01701 117 aa10.17□□□□□ -0.78
APOBEC3D-202ENST00000427494 CMC4P56277 68 aaPredicted RBP10.17□□□□□ -0.78
APOBEC3D-202ENST00000427494 CFAP126Q5VTH2 177 aa10.17□□□□□ -0.78
APOBEC3D-202ENST00000427494 C1orf158Q8N1D5 194 aa10.17□□□□□ -0.78
APOBEC3D-202ENST00000427494 MTORP42345 2549 aa10.17□□□□□ -0.78
APOBEC3D-202ENST00000427494 TRAV8-6A0A0B4J262 113 aa10.17□□□□□ -0.78
APOBEC3D-202ENST00000427494 AZU1P20160 251 aa10.17□□□□□ -0.78
APOBEC3D-202ENST00000427494 NACAE9PAV3 2078 aa10.17□□□□□ -0.78
APOBEC3D-202ENST00000427494 NPSP0C0P6 89 aa10.16□□□□□ -0.78
APOBEC3D-202ENST00000427494 SEC11AP67812 179 aa10.16□□□□□ -0.78
APOBEC3D-202ENST00000427494 PMVKQ15126 192 aa10.16□□□□□ -0.78
APOBEC3D-202ENST00000427494 KRTAP10-3P60369 221 aa10.15□□□□□ -0.78
APOBEC3D-202ENST00000427494 BEAN1Q3B7T3 259 aa10.15□□□□□ -0.78
APOBEC3D-202ENST00000427494 HIGD1BQ9P298 99 aa10.15□□□□□ -0.78
APOBEC3D-202ENST00000427494 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.78
APOBEC3D-202ENST00000427494 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.78
APOBEC3D-202ENST00000427494 RHODO00212 210 aa10.15□□□□□ -0.78
APOBEC3D-202ENST00000427494 MAPKAPK5-AS1Q8N8E1 139 aa10.15□□□□□ -0.78
APOBEC3D-202ENST00000427494 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
APOBEC3D-202ENST00000427494 WFDC10AQ9H1F0 79 aa10.15□□□□□ -0.78
APOBEC3D-202ENST00000427494 CST9LQ9H4G1 147 aa10.15□□□□□ -0.78
APOBEC3D-202ENST00000427494 HIVEP2P31629 2446 aa10.15□□□□□ -0.79
APOBEC3D-202ENST00000427494 Q6ZSN1 163 aa10.14□□□□□ -0.79
APOBEC3D-202ENST00000427494 NDUFA11Q86Y39 141 aa10.14□□□□□ -0.79
APOBEC3D-202ENST00000427494 IGLV4-69A0A075B6H9 119 aa10.14□□□□□ -0.79
APOBEC3D-202ENST00000427494 A6NDN8 102 aa10.14□□□□□ -0.79
APOBEC3D-202ENST00000427494 INAFM1C9JVW0 142 aa10.14□□□□□ -0.79
APOBEC3D-202ENST00000427494 RS1O15537 224 aa10.14□□□□□ -0.79
APOBEC3D-202ENST00000427494 EMP1P54849 157 aa10.14□□□□□ -0.79
APOBEC3D-202ENST00000427494 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
APOBEC3D-202ENST00000427494 OR11H2Q8NH07 326 aa10.14□□□□□ -0.79
APOBEC3D-202ENST00000427494 FAM110AQ9BQ89 295 aa10.13□□□□□ -0.79
APOBEC3D-202ENST00000427494 HECTD1Q9ULT8 2610 aa10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 C11orf86A6NJI1 115 aa10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 E9PLD3 99 aa10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 PF4P02776 101 aa10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 RPL35AP18077 110 aaKnown RBP10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 PAPPA-AS1Q5QFB9 102 aa10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 IL17DQ8TAD2 202 aa10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 OPRPNQ99935 248 aaPredicted RBP10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 C19orf73Q9NVV2 129 aa10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 TRGV1A0A0A0MS02 117 aa10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 RNASE8Q8TDE3 154 aaKnown RBP10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 Q9UF83 564 aa10.12□□□□□ -0.79
APOBEC3D-202ENST00000427494 SETD2Q9BYW2 2564 aaPredicted RBP10.11□□□□□ -0.79
APOBEC3D-202ENST00000427494 IGHV3-53P01767 116 aa10.11□□□□□ -0.79
APOBEC3D-202ENST00000427494 TMEM263Q8WUH6 116 aaKnown RBP10.11□□□□□ -0.79
APOBEC3D-202ENST00000427494 PRADC1Q9BSG0 188 aa10.11□□□□□ -0.79
APOBEC3D-202ENST00000427494 MYMXA0A1B0GTQ4 84 aa10.1□□□□□ -0.79
APOBEC3D-202ENST00000427494 GIG44P09565 113 aaPredicted RBP10.1□□□□□ -0.79
APOBEC3D-202ENST00000427494 GCSHP23434 173 aa10.1□□□□□ -0.79
APOBEC3D-202ENST00000427494 VAMP3Q15836 100 aa10.1□□□□□ -0.79
APOBEC3D-202ENST00000427494 HERVK_113P61574 105 aa10.1□□□□□ -0.79
APOBEC3D-202ENST00000427494 OR4C5Q8NGB2 326 aa10.1□□□□□ -0.79
APOBEC3D-202ENST00000427494 DNAJC30Q96LL9 226 aa10.1□□□□□ -0.79
APOBEC3D-202ENST00000427494 IGLV4-3A0A075B6K6 122 aa10.09□□□□□ -0.79
APOBEC3D-202ENST00000427494 PTTG1IPP53801 180 aa10.09□□□□□ -0.79
APOBEC3D-202ENST00000427494 H3BRM9 83 aa10.08□□□□□ -0.8
APOBEC3D-202ENST00000427494 UBE2V1Q13404 147 aa10.08□□□□□ -0.8
APOBEC3D-202ENST00000427494 TMEM170BQ5T4T1 132 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms