RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 COX6CP09669 75 aa12.18□□□□□ -0.46
PKP4-205ENST00000426248 C5orf56Q8N8D9 126 aa12.18□□□□□ -0.46
PKP4-205ENST00000426248 PIFOQ8TCI5 191 aa12.18□□□□□ -0.46
PKP4-205ENST00000426248 ZMAT4Q9H898 229 aa12.18□□□□□ -0.46
PKP4-205ENST00000426248 ASH1LQ9NR48 2969 aaKnown RBP12.18□□□□□ -0.46
PKP4-205ENST00000426248 C2orf66Q6UXQ4 117 aa12.18□□□□□ -0.46
PKP4-205ENST00000426248 FAM110DQ8TAY7 271 aaPredicted RBP12.18□□□□□ -0.46
PKP4-205ENST00000426248 PVRIGQ6DKI7 326 aa12.18□□□□□ -0.46
PKP4-205ENST00000426248 TMEM101Q96IK0 257 aa12.17□□□□□ -0.46
PKP4-205ENST00000426248 A4D1N5 150 aa12.17□□□□□ -0.46
PKP4-205ENST00000426248 K7EIM0 57 aa12.17□□□□□ -0.46
PKP4-205ENST00000426248 ORMDL2Q53FV1 153 aa12.17□□□□□ -0.46
PKP4-205ENST00000426248 F8P00451 2351 aa12.16□□□□□ -0.46
PKP4-205ENST00000426248 RNF185Q96GF1 192 aa12.16□□□□□ -0.46
PKP4-205ENST00000426248 LINC00477Q96M19 166 aa12.16□□□□□ -0.46
PKP4-205ENST00000426248 CRYGBP07316 175 aa12.16□□□□□ -0.46
PKP4-205ENST00000426248 PSMG3-AS1Q96PY0 264 aa12.16□□□□□ -0.46
PKP4-205ENST00000426248 TMEM14CQ9P0S9 112 aa12.16□□□□□ -0.46
PKP4-205ENST00000426248 TRGV11A0A075B6L2 103 aa12.16□□□□□ -0.46
PKP4-205ENST00000426248 CFC1BP0CG36 223 aa12.15□□□□□ -0.46
PKP4-205ENST00000426248 CFC1P0CG37 223 aa12.15□□□□□ -0.46
PKP4-205ENST00000426248 LRRC75A-AS1Q8N1F1 130 aa12.15□□□□□ -0.46
PKP4-205ENST00000426248 KLK5Q9Y337 293 aaPredicted RBP12.15□□□□□ -0.46
PKP4-205ENST00000426248 HRNRQ86YZ3 2850 aaPredicted RBP12.15□□□□□ -0.46
PKP4-205ENST00000426248 TRAV8-3A0A0A6YYJ7 113 aa12.15□□□□□ -0.46
PKP4-205ENST00000426248 RS1O15537 224 aa12.15□□□□□ -0.46
PKP4-205ENST00000426248 LINC01620Q4KN68 170 aa12.15□□□□□ -0.46
PKP4-205ENST00000426248 OR13C6PQ8NH95 151 aa12.15□□□□□ -0.46
PKP4-205ENST00000426248 CSDC2Q9Y534 153 aaKnown RBP12.15□□□□□ -0.46
PKP4-205ENST00000426248 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.46
PKP4-205ENST00000426248 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
PKP4-205ENST00000426248 I3L2K1 104 aa12.14□□□□□ -0.47
PKP4-205ENST00000426248 UNC79Q9P2D8 2635 aa12.14□□□□□ -0.47
PKP4-205ENST00000426248 IGKV1-17P01599 117 aa12.14□□□□□ -0.47
PKP4-205ENST00000426248 RNF182Q8N6D2 247 aa12.14□□□□□ -0.47
PKP4-205ENST00000426248 MRPS12O15235 138 aaKnown RBP12.13□□□□□ -0.47
PKP4-205ENST00000426248 UBE2D3P61077 147 aa12.13□□□□□ -0.47
PKP4-205ENST00000426248 UBE2D2P62837 147 aa12.13□□□□□ -0.47
PKP4-205ENST00000426248 LYPD1Q8N2G4 141 aa12.13□□□□□ -0.47
PKP4-205ENST00000426248 C14orf178Q8N769 122 aaPredicted RBP12.13□□□□□ -0.47
PKP4-205ENST00000426248 FANCD2OSQ96PS1 177 aa12.13□□□□□ -0.47
PKP4-205ENST00000426248 SMIM2Q9BVW6 85 aa12.13□□□□□ -0.47
PKP4-205ENST00000426248 GAGE2AQ6NT46 116 aa12.13□□□□□ -0.47
PKP4-205ENST00000426248 Q6ZS46 218 aa12.13□□□□□ -0.47
PKP4-205ENST00000426248 IGLV11-55A0A075B6I3 123 aa12.12□□□□□ -0.47
PKP4-205ENST00000426248 H3BRN7 92 aa12.12□□□□□ -0.47
PKP4-205ENST00000426248 RNASE4P34096 147 aaKnown RBP12.11□□□□□ -0.47
PKP4-205ENST00000426248 SPENQ96T58 3664 aaKnown RBP12.11□□□□□ -0.47
PKP4-205ENST00000426248 ADARB2-AS1A8MUL3 147 aa12.11□□□□□ -0.47
PKP4-205ENST00000426248 ITPR2Q14571 2701 aa12.11□□□□□ -0.47
PKP4-205ENST00000426248 TRBV7-1A0A0A6YYK4 115 aa12.11□□□□□ -0.47
PKP4-205ENST00000426248 UBE2D1P51668 147 aa12.11□□□□□ -0.47
PKP4-205ENST00000426248 SUMO2P61956 95 aaKnown RBP12.11□□□□□ -0.47
PKP4-205ENST00000426248 HERVK_113P63121 156 aa12.11□□□□□ -0.47
PKP4-205ENST00000426248 EBI3Q14213 229 aa12.11□□□□□ -0.47
PKP4-205ENST00000426248 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
PKP4-205ENST00000426248 J3KT08 172 aa12.1□□□□□ -0.47
PKP4-205ENST00000426248 GATD1Q8NB37 220 aa12.1□□□□□ -0.47
PKP4-205ENST00000426248 RPL39LQ96EH5 51 aaKnown RBP12.1□□□□□ -0.47
PKP4-205ENST00000426248 CELSR2Q9HCU4 2923 aa12.1□□□□□ -0.47
PKP4-205ENST00000426248 MGAM2Q2M2H8 2515 aa12.1□□□□□ -0.47
PKP4-205ENST00000426248 A6NDX4 124 aa12.1□□□□□ -0.47
PKP4-205ENST00000426248 SMIM9A6NGZ8 99 aa12.1□□□□□ -0.47
PKP4-205ENST00000426248 DYNLRB2Q8TF09 96 aa12.1□□□□□ -0.47
PKP4-205ENST00000426248 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
PKP4-205ENST00000426248 INS-IGF2F8WCM5 200 aa12.09□□□□□ -0.47
PKP4-205ENST00000426248 SMR3AQ99954 134 aa12.09□□□□□ -0.47
PKP4-205ENST00000426248 BAALCQ8WXS3 180 aa12.09□□□□□ -0.47
PKP4-205ENST00000426248 RNASE1P07998 156 aaKnown RBP12.09□□□□□ -0.47
PKP4-205ENST00000426248 Q8N6K4 173 aa12.09□□□□□ -0.47
PKP4-205ENST00000426248 SPXQ9BT56 116 aa12.09□□□□□ -0.47
PKP4-205ENST00000426248 A0A0J9YY99 117 aa12.08□□□□□ -0.48
PKP4-205ENST00000426248 DUSP14O95147 198 aaKnown RBP12.08□□□□□ -0.48
PKP4-205ENST00000426248 TP53TG1Q9Y2A0 90 aa12.08□□□□□ -0.48
PKP4-205ENST00000426248 CTSGP08311 255 aa12.08□□□□□ -0.48
PKP4-205ENST00000426248 USMG5Q96IX5 58 aa12.08□□□□□ -0.48
PKP4-205ENST00000426248 IGLC6P0CF74 106 aa12.08□□□□□ -0.48
PKP4-205ENST00000426248 FAM19A5Q7Z5A7 132 aaPredicted RBP12.08□□□□□ -0.48
PKP4-205ENST00000426248 FAM223BA6NKX1 122 aa12.07□□□□□ -0.48
PKP4-205ENST00000426248 FAM223AQ8IWN6 122 aa12.07□□□□□ -0.48
PKP4-205ENST00000426248 J3QQQ9 107 aa12.07□□□□□ -0.48
PKP4-205ENST00000426248 HIST2H2BDQ6DRA6 164 aa12.07□□□□□ -0.48
PKP4-205ENST00000426248 MUSTN1Q8IVN3 82 aa12.07□□□□□ -0.48
PKP4-205ENST00000426248 RASL10AQ92737 203 aa12.07□□□□□ -0.48
PKP4-205ENST00000426248 SYNJ2BPP57105 145 aa12.07□□□□□ -0.48
PKP4-205ENST00000426248 IGHG2P01859 326 aa12.06□□□□□ -0.48
PKP4-205ENST00000426248 DEFB1P60022 68 aa12.06□□□□□ -0.48
PKP4-205ENST00000426248 CLEC2BQ92478 149 aa12.06□□□□□ -0.48
PKP4-205ENST00000426248 ODF3Q96PU9 254 aa12.06□□□□□ -0.48
PKP4-205ENST00000426248 C10orf99Q6UWK7 81 aa12.06□□□□□ -0.48
PKP4-205ENST00000426248 DNAJC30Q96LL9 226 aa12.06□□□□□ -0.48
PKP4-205ENST00000426248 ZANQ9Y493 2812 aa12.06□□□□□ -0.48
PKP4-205ENST00000426248 TEX15Q9BXT5 2789 aa12.06□□□□□ -0.48
PKP4-205ENST00000426248 GCN1Q92616 2671 aaKnown RBP12.05□□□□□ -0.48
PKP4-205ENST00000426248 TRAV12-1A0A0B4J245 112 aa12.05□□□□□ -0.48
PKP4-205ENST00000426248 PRAC2D3DTV9 90 aa12.05□□□□□ -0.48
PKP4-205ENST00000426248 NDUFA7O95182 113 aa12.05□□□□□ -0.48
PKP4-205ENST00000426248 MRGPRG-AS1Q2M3A8 158 aa12.05□□□□□ -0.48
PKP4-205ENST00000426248 DEFB136Q30KP8 78 aa12.05□□□□□ -0.48
PKP4-205ENST00000426248 PDE6HQ13956 83 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms