RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ZNF415Q09FC8 603 aa11.28□□□□□ -0.6
SHOX2-202ENST00000425436 LINC01545Q5VT33 79 aa11.28□□□□□ -0.6
SHOX2-202ENST00000425436 ZNF705AQ6ZN79 300 aaPredicted RBP11.28□□□□□ -0.6
SHOX2-202ENST00000425436 CSNK1G2-AS1Q8NCQ2 148 aa11.28□□□□□ -0.6
SHOX2-202ENST00000425436 RASL10AQ92737 203 aa11.28□□□□□ -0.6
SHOX2-202ENST00000425436 LINC01587Q99440 93 aa11.28□□□□□ -0.6
SHOX2-202ENST00000425436 SPXQ9BT56 116 aa11.28□□□□□ -0.6
SHOX2-202ENST00000425436 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.61
SHOX2-202ENST00000425436 ATP5LO75964 103 aa11.27□□□□□ -0.61
SHOX2-202ENST00000425436 ZNF876PQ49A33 203 aa11.27□□□□□ -0.61
SHOX2-202ENST00000425436 SPATA45Q537H7 98 aa11.27□□□□□ -0.61
SHOX2-202ENST00000425436 LINC00173Q6ZV60 143 aa11.27□□□□□ -0.61
SHOX2-202ENST00000425436 IFI27L1Q96BM0 104 aa11.27□□□□□ -0.61
SHOX2-202ENST00000425436 MIEN1Q9BRT3 115 aa11.27□□□□□ -0.61
SHOX2-202ENST00000425436 M0R2P5 195 aa11.26□□□□□ -0.61
SHOX2-202ENST00000425436 C1QTNF4Q9BXJ3 329 aa11.26□□□□□ -0.61
SHOX2-202ENST00000425436 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
SHOX2-202ENST00000425436 A8MWV9 139 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 F5H697 171 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 RBMY1A1P0DJD3 496 aaKnown RBP11.25□□□□□ -0.61
SHOX2-202ENST00000425436 RBMY1CP0DJD4 496 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 RBMY1FQ15415 496 aaKnown RBP11.25□□□□□ -0.61
SHOX2-202ENST00000425436 LGALS9BQ3B8N2 356 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 LGALS9CQ6DKI2 356 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 OR11H2Q8NH07 326 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 IGHV3OR16-12A0A075B7B8 117 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 TRBV6-5A0A0K0K1A5 114 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 VCYO14598 125 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 CRYGDP07320 174 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 TP53TG1Q9Y2A0 90 aa11.25□□□□□ -0.61
SHOX2-202ENST00000425436 H7C1H1 209 aa11.24□□□□□ -0.61
SHOX2-202ENST00000425436 TCAPO15273 167 aa11.24□□□□□ -0.61
SHOX2-202ENST00000425436 MRPL52Q86TS9 123 aaKnown RBP11.24□□□□□ -0.61
SHOX2-202ENST00000425436 EDA2RQ9HAV5 297 aa11.24□□□□□ -0.61
SHOX2-202ENST00000425436 UQCR10Q9UDW1 63 aa11.24□□□□□ -0.61
SHOX2-202ENST00000425436 A0A087WWL8 130 aa11.23□□□□□ -0.61
SHOX2-202ENST00000425436 NUDT3O95989 172 aa11.23□□□□□ -0.61
SHOX2-202ENST00000425436 HTN1P15515 57 aa11.23□□□□□ -0.61
SHOX2-202ENST00000425436 SUMO4Q6EEV6 95 aa11.23□□□□□ -0.61
SHOX2-202ENST00000425436 C1orf158Q8N1D5 194 aa11.23□□□□□ -0.61
SHOX2-202ENST00000425436 TMEM208Q9BTX3 173 aa11.23□□□□□ -0.61
SHOX2-202ENST00000425436 PRM2P04554 102 aa11.22□□□□□ -0.61
SHOX2-202ENST00000425436 RPL39LQ96EH5 51 aaKnown RBP11.22□□□□□ -0.61
SHOX2-202ENST00000425436 KIR2DL4Q99706 377 aa11.22□□□□□ -0.61
SHOX2-202ENST00000425436 JPT2Q9H910 190 aa11.22□□□□□ -0.61
SHOX2-202ENST00000425436 RHODO00212 210 aa11.21□□□□□ -0.61
SHOX2-202ENST00000425436 DEFB4AO15263 64 aa11.21□□□□□ -0.61
SHOX2-202ENST00000425436 ZNF56Q15929 161 aa11.21□□□□□ -0.61
SHOX2-202ENST00000425436 LBHQ53QV2 105 aaPredicted RBP11.21□□□□□ -0.61
SHOX2-202ENST00000425436 ATOH7Q8N100 152 aa11.21□□□□□ -0.61
SHOX2-202ENST00000425436 C14orf144Q96I85 54 aa11.21□□□□□ -0.61
SHOX2-202ENST00000425436 GOLT1BQ9Y3E0 138 aa11.21□□□□□ -0.61
SHOX2-202ENST00000425436 X6R8D5 127 aa11.21□□□□□ -0.61
SHOX2-202ENST00000425436 H0Y8G0 127 aa11.2□□□□□ -0.62
SHOX2-202ENST00000425436 M0QY20 66 aa11.2□□□□□ -0.62
SHOX2-202ENST00000425436 IGLC3P0DOY3 106 aa11.2□□□□□ -0.62
SHOX2-202ENST00000425436 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
SHOX2-202ENST00000425436 FAM74A4Q5TZK3 123 aa11.2□□□□□ -0.62
SHOX2-202ENST00000425436 STAB2Q8WWQ8 2551 aa11.2□□□□□ -0.62
SHOX2-202ENST00000425436 TRBV27A0A0K0K1C4 114 aa11.19□□□□□ -0.62
SHOX2-202ENST00000425436 PRSS1P07477 247 aa11.19□□□□□ -0.62
SHOX2-202ENST00000425436 C11orf72Q8NBR9 251 aa11.19□□□□□ -0.62
SHOX2-202ENST00000425436 TOMM6Q96B49 74 aa11.19□□□□□ -0.62
SHOX2-202ENST00000425436 A0A0J9YWU9 116 aa11.19□□□□□ -0.62
SHOX2-202ENST00000425436 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.19□□□□□ -0.62
SHOX2-202ENST00000425436 IGHV4-28A0A0C4DH34 117 aa11.17□□□□□ -0.62
SHOX2-202ENST00000425436 SDHAF1A6NFY7 115 aa11.17□□□□□ -0.62
SHOX2-202ENST00000425436 Q8NAQ8 132 aa11.17□□□□□ -0.62
SHOX2-202ENST00000425436 C18orf15Q96N68 181 aa11.17□□□□□ -0.62
SHOX2-202ENST00000425436 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
SHOX2-202ENST00000425436 MIFP14174 115 aa11.16□□□□□ -0.62
SHOX2-202ENST00000425436 RHOHQ15669 191 aa11.16□□□□□ -0.62
SHOX2-202ENST00000425436 ZFP2Q6ZN57 461 aa11.16□□□□□ -0.62
SHOX2-202ENST00000425436 Q6ZN92 141 aa11.16□□□□□ -0.62
SHOX2-202ENST00000425436 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
SHOX2-202ENST00000425436 PMCHL2Q9BQD1 86 aa11.16□□□□□ -0.62
SHOX2-202ENST00000425436 MUC4Q99102 2169 aa11.15□□□□□ -0.62
SHOX2-202ENST00000425436 TRAV12-1A0A0B4J245 112 aa11.15□□□□□ -0.62
SHOX2-202ENST00000425436 M0R143 59 aa11.15□□□□□ -0.62
SHOX2-202ENST00000425436 AZU1P20160 251 aa11.15□□□□□ -0.62
SHOX2-202ENST00000425436 UFSP1Q6NVU6 142 aa11.15□□□□□ -0.62
SHOX2-202ENST00000425436 C2orf66Q6UXQ4 117 aa11.15□□□□□ -0.62
SHOX2-202ENST00000425436 ERASQ7Z444 233 aa11.15□□□□□ -0.62
SHOX2-202ENST00000425436 CYSLTR1Q9Y271 337 aa11.15□□□□□ -0.62
SHOX2-202ENST00000425436 I3L3M4 83 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 RS1O15537 224 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 CIDEAO60543 219 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 EMP1P54849 157 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 CTAG1AP78358 180 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 RRN3P1Q2M238 152 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 MAJINQ3KP22 176 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 CFAP126Q5VTH2 177 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 C16orf74Q96GX8 76 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 DNAJC30Q96LL9 226 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 MRPS16Q9Y3D3 137 aaKnown RBP11.14□□□□□ -0.63
SHOX2-202ENST00000425436 hDV102S1A0JD36 115 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 SMIM9A6NGZ8 99 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 HNRNPA3P51991 378 aaKnown RBP11.14□□□□□ -0.63
SHOX2-202ENST00000425436 ODF1Q14990 250 aa11.14□□□□□ -0.63
SHOX2-202ENST00000425436 IL17DQ8TAD2 202 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms