RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ATP5LO75964 103 aa19.11■□□□□ 0.65
LDB1-202ENST00000425280 TOMM6Q96B49 74 aa19.11■□□□□ 0.65
LDB1-202ENST00000425280 hDV102S1A0JD36 115 aa19.1■□□□□ 0.65
LDB1-202ENST00000425280 H7C1H1 209 aa19.1■□□□□ 0.65
LDB1-202ENST00000425280 Q6ZSN1 163 aa19.1■□□□□ 0.65
LDB1-202ENST00000425280 MIEN1Q9BRT3 115 aa19.1■□□□□ 0.65
LDB1-202ENST00000425280 RHODO00212 210 aa19.09■□□□□ 0.65
LDB1-202ENST00000425280 KIR2DL4Q99706 377 aa19.09■□□□□ 0.65
LDB1-202ENST00000425280 TRGV1A0A0A0MS02 117 aa19.09■□□□□ 0.65
LDB1-202ENST00000425280 DEFA6Q01524 100 aa19.09■□□□□ 0.65
LDB1-202ENST00000425280 DEFB104AQ8WTQ1 72 aa19.09■□□□□ 0.65
LDB1-202ENST00000425280 P0DMU3 169 aa19.08■□□□□ 0.64
LDB1-202ENST00000425280 FAM231AP0DMU4 169 aa19.08■□□□□ 0.64
LDB1-202ENST00000425280 FAM231CP0DMU5 169 aa19.08■□□□□ 0.64
LDB1-202ENST00000425280 C2orf66Q6UXQ4 117 aa19.08■□□□□ 0.64
LDB1-202ENST00000425280 C16orf74Q96GX8 76 aa19.08■□□□□ 0.64
LDB1-202ENST00000425280 PLAC8L1A1L4L8 177 aa19.07■□□□□ 0.64
LDB1-202ENST00000425280 PRSS1P07477 247 aa19.07■□□□□ 0.64
LDB1-202ENST00000425280 IGLC3P0DOY3 106 aa19.07■□□□□ 0.64
LDB1-202ENST00000425280 ZFP2Q6ZN57 461 aa19.07■□□□□ 0.64
LDB1-202ENST00000425280 C14orf144Q96I85 54 aa19.07■□□□□ 0.64
LDB1-202ENST00000425280 Q6ZTI0 123 aa19.06■□□□□ 0.64
LDB1-202ENST00000425280 DAZ2Q13117 558 aaKnown RBP19.05■□□□□ 0.64
LDB1-202ENST00000425280 SCGB3A1Q96QR1 104 aa19.05■□□□□ 0.64
LDB1-202ENST00000425280 DKK2Q9UBU2 259 aa19.05■□□□□ 0.64
LDB1-202ENST00000425280 ODF1Q14990 250 aa19.05■□□□□ 0.64
LDB1-202ENST00000425280 RRN3P1Q2M238 152 aa19.05■□□□□ 0.64
LDB1-202ENST00000425280 NOP10Q9NPE3 64 aaKnown RBP19.05■□□□□ 0.64
LDB1-202ENST00000425280 HSBP1L1C9JCN9 74 aa19.04■□□□□ 0.64
LDB1-202ENST00000425280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.04■□□□□ 0.64
LDB1-202ENST00000425280 WIPF1O43516 503 aa19.04■□□□□ 0.64
LDB1-202ENST00000425280 IGHV3-53P01767 116 aa19.04■□□□□ 0.64
LDB1-202ENST00000425280 PRIMA1Q86XR5 153 aa19.03■□□□□ 0.64
LDB1-202ENST00000425280 OR4C5Q8NGB2 326 aa19.03■□□□□ 0.64
LDB1-202ENST00000425280 UQCR10Q9UDW1 63 aa19.02■□□□□ 0.64
LDB1-202ENST00000425280 Q9UF83 564 aa19.02■□□□□ 0.64
LDB1-202ENST00000425280 TRRAPQ9Y4A5 3859 aa19.02■□□□□ 0.64
LDB1-202ENST00000425280 I3L3M4 83 aa19.02■□□□□ 0.63
LDB1-202ENST00000425280 CYSLTR1Q9Y271 337 aa19.02■□□□□ 0.63
LDB1-202ENST00000425280 TSHBP01222 138 aa19.01■□□□□ 0.63
LDB1-202ENST00000425280 G0S2P27469 103 aa19.01■□□□□ 0.63
LDB1-202ENST00000425280 RIPPLY3P57055 190 aa19.01■□□□□ 0.63
LDB1-202ENST00000425280 TP53TG1Q9Y2A0 90 aa19.01■□□□□ 0.63
LDB1-202ENST00000425280 Q6ZN92 141 aa19■□□□□ 0.63
LDB1-202ENST00000425280 NEXN-AS1Q8NBZ9 246 aa19■□□□□ 0.63
LDB1-202ENST00000425280 ZNF479Q96JC4 524 aa19■□□□□ 0.63
LDB1-202ENST00000425280 ZMAT4Q9H898 229 aa19■□□□□ 0.63
LDB1-202ENST00000425280 TNFRSF18Q9Y5U5 241 aa19■□□□□ 0.63
LDB1-202ENST00000425280 RHOHQ15669 191 aa18.99■□□□□ 0.63
LDB1-202ENST00000425280 ERASQ7Z444 233 aa18.99■□□□□ 0.63
LDB1-202ENST00000425280 OVOL2Q9BRP0 275 aa18.99■□□□□ 0.63
LDB1-202ENST00000425280 C3orf56Q8N813 242 aa18.99■□□□□ 0.63
LDB1-202ENST00000425280 TRAV4A0A0B4J268 109 aa18.98■□□□□ 0.63
LDB1-202ENST00000425280 RPL39P62891 51 aaKnown RBP18.98■□□□□ 0.63
LDB1-202ENST00000425280 FBN1P35555 2871 aaKnown RBP18.97■□□□□ 0.63
LDB1-202ENST00000425280 A0A087WX48 190 aa18.97■□□□□ 0.63
LDB1-202ENST00000425280 LINC01549A6NIU2 74 aa18.97■□□□□ 0.63
LDB1-202ENST00000425280 DNAJC30Q96LL9 226 aa18.96■□□□□ 0.63
LDB1-202ENST00000425280 TRAV12-1A0A0B4J245 112 aa18.96■□□□□ 0.63
LDB1-202ENST00000425280 BAALCQ8WXS3 180 aa18.96■□□□□ 0.63
LDB1-202ENST00000425280 IGIPA6NJ69 53 aa18.95■□□□□ 0.62
LDB1-202ENST00000425280 STPG4Q8N801 248 aa18.95■□□□□ 0.62
LDB1-202ENST00000425280 MRPL35Q9NZE8 188 aaKnown RBP18.95■□□□□ 0.62
LDB1-202ENST00000425280 GAGE12BA1L429 117 aa18.94■□□□□ 0.62
LDB1-202ENST00000425280 GAGE7O76087 117 aa18.94■□□□□ 0.62
LDB1-202ENST00000425280 GAGE12FP0CL80 117 aa18.94■□□□□ 0.62
LDB1-202ENST00000425280 GAGE12GP0CL81 117 aa18.94■□□□□ 0.62
LDB1-202ENST00000425280 GAGE12IP0CL82 117 aa18.94■□□□□ 0.62
LDB1-202ENST00000425280 ANKRD39Q53RE8 183 aa18.94■□□□□ 0.62
LDB1-202ENST00000425280 SHISA2Q6UWI4 295 aa18.94■□□□□ 0.62
LDB1-202ENST00000425280 IGKCP01834 107 aa18.94■□□□□ 0.62
LDB1-202ENST00000425280 KIR2DL5BQ8NHK3 375 aa18.94■□□□□ 0.62
LDB1-202ENST00000425280 DPM2O94777 84 aa18.93■□□□□ 0.62
LDB1-202ENST00000425280 X6R8D5 127 aa18.93■□□□□ 0.62
LDB1-202ENST00000425280 C20orf203Q8NBC4 194 aa18.92■□□□□ 0.62
LDB1-202ENST00000425280 TRGV2A0A075B6R0 118 aa18.91■□□□□ 0.62
LDB1-202ENST00000425280 C12orf54Q6X4T0 127 aa18.91■□□□□ 0.62
LDB1-202ENST00000425280 TIMM17AQ99595 171 aa18.91■□□□□ 0.62
LDB1-202ENST00000425280 TP73-AS1Q9UF72 201 aa18.91■□□□□ 0.62
LDB1-202ENST00000425280 HHLA3Q9XRX5 114 aa18.91■□□□□ 0.62
LDB1-202ENST00000425280 EMP1P54849 157 aa18.91■□□□□ 0.62
LDB1-202ENST00000425280 APOC4P55056 127 aa18.91■□□□□ 0.62
LDB1-202ENST00000425280 TMEM141Q96I45 108 aa18.91■□□□□ 0.62
LDB1-202ENST00000425280 HNRNPA3P51991 378 aaKnown RBP18.9■□□□□ 0.62
LDB1-202ENST00000425280 OXLD1Q5BKU9 147 aa18.89■□□□□ 0.62
LDB1-202ENST00000425280 CHTOPQ9Y3Y2 248 aaKnown RBP18.89■□□□□ 0.62
LDB1-202ENST00000425280 F8VRH5 84 aa18.89■□□□□ 0.61
LDB1-202ENST00000425280 K7EQD1 137 aa18.89■□□□□ 0.61
LDB1-202ENST00000425280 SMIM9A6NGZ8 99 aa18.88■□□□□ 0.61
LDB1-202ENST00000425280 PRSS29PA6NIE9 313 aa18.88■□□□□ 0.61
LDB1-202ENST00000425280 SLC25A34Q6PIV7 304 aa18.88■□□□□ 0.61
LDB1-202ENST00000425280 TCTAP57738 103 aa18.88■□□□□ 0.61
LDB1-202ENST00000425280 EREGO14944 169 aa18.87■□□□□ 0.61
LDB1-202ENST00000425280 COX8AP10176 69 aa18.87■□□□□ 0.61
LDB1-202ENST00000425280 SLC25A29Q8N8R3 303 aa18.87■□□□□ 0.61
LDB1-202ENST00000425280 PHLDA1Q8WV24 401 aaPredicted RBP18.87■□□□□ 0.61
LDB1-202ENST00000425280 SNHG12Q9BXW3 62 aa18.87■□□□□ 0.61
LDB1-202ENST00000425280 TRBV10-1A0A0K0K1A3 114 aa18.86■□□□□ 0.61
LDB1-202ENST00000425280 PLNP26678 52 aa18.86■□□□□ 0.61
LDB1-202ENST00000425280 DEFB135Q30KP9 77 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms