RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 ZNF705AQ6ZN79 300 aaPredicted RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 GOLT1AQ6ZVE7 132 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 PRNTQ86SH4 94 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 BAGE2Q86Y30 109 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 TMEM183AQ8IXX5 376 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 FAM24BQ8N5W8 94 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 EIF4E3Q8N5X7 224 aaKnown RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 FAM210AQ96ND0 272 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 TIMM8BQ9Y5J9 83 aaPredicted RBP2.36□□□□□ -2.03
HDAC9-209ENST00000425071 LY96Q9Y6Y9 160 aa2.36□□□□□ -2.03
HDAC9-209ENST00000425071 FBN3Q75N90 2809 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 IGKV2D-24A0A075B6R9 120 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 TRAV12-3A0A0B4J271 114 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 GGTLC3B5MD39 225 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 C9JCJ5 164 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 F2Z2F3 143 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 F6UB75 175 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 C3orf84H3BNL1 204 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 ZNF324O75467 553 aaPredicted RBP2.35□□□□□ -2.03
HDAC9-209ENST00000425071 GCGP01275 180 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 LTAP01374 205 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 PFN1P07737 140 aaKnown RBP2.35□□□□□ -2.03
HDAC9-209ENST00000425071 ZNF705DP0CH99 300 aaPredicted RBP2.35□□□□□ -2.03
HDAC9-209ENST00000425071 ZNF705BP0CI00 300 aaPredicted RBP2.35□□□□□ -2.03
HDAC9-209ENST00000425071 HTN1P15515 57 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 S100A4P26447 101 aaKnown RBP2.35□□□□□ -2.03
HDAC9-209ENST00000425071 RPL35P42766 123 aaKnown RBP2.35□□□□□ -2.03
HDAC9-209ENST00000425071 SPINK13Q1W4C9 94 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 TMEM241Q24JQ0 296 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 DEFB135Q30KP9 77 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 TDRG1Q3Y452 100 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 SOHLH1Q5JUK2 328 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 CLLU1Q5K131 121 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 GDF5OSQ5U4N7 250 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 Q6AWC8 147 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 UQCC3Q6UW78 93 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 AMTNQ6UX39 209 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 TMEM263Q8WUH6 116 aaKnown RBP2.35□□□□□ -2.03
HDAC9-209ENST00000425071 FAM19A4Q96LR4 140 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 SLC35B3Q9H1N7 401 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 C11orf68Q9H3H3 251 aaKnown RBP2.35□□□□□ -2.03
HDAC9-209ENST00000425071 RPH3ALQ9UNE2 315 aa2.35□□□□□ -2.03
HDAC9-209ENST00000425071 KLK5Q9Y337 293 aaPredicted RBP2.35□□□□□ -2.03
HDAC9-209ENST00000425071 NBEAL2Q6ZNJ1 2754 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 MEGF8Q7Z7M0 2845 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.34□□□□□ -2.03
HDAC9-209ENST00000425071 TRAV12-2A0A075B6T6 113 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 IGKV2-40A0A087WW87 121 aaPredicted RBP2.34□□□□□ -2.03
HDAC9-209ENST00000425071 A0A1B0GV50 99 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 ZNF727A8MUV8 499 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 A8MWL6 223 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 M0R2P5 195 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 M0R2Z0 102 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 PPP1R2P9O14990 202 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 CRXO43186 299 aaPredicted RBP2.34□□□□□ -2.03
HDAC9-209ENST00000425071 IGKV2D-40P01614 121 aaPredicted RBP2.34□□□□□ -2.03
HDAC9-209ENST00000425071 P01737 135 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 ORM1P02763 201 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 CXCL1P09341 107 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 MGST1P10620 155 aaKnown RBP2.34□□□□□ -2.03
HDAC9-209ENST00000425071 HLA-DMBP28068 263 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 ATP5G3P48201 142 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 ERCC8Q13216 396 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 OR5I1Q13606 314 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 NDUFA5Q16718 116 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 DNLZQ5SXM8 178 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 SSX7Q7RTT5 188 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 SMIM15Q7Z3B0 74 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.34□□□□□ -2.03
HDAC9-209ENST00000425071 PTH2Q96A98 100 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 BORCS7Q96B45 105 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 C18orf15Q96N68 181 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 WFDC10AQ9H1F0 79 aa2.34□□□□□ -2.03
HDAC9-209ENST00000425071 YTHDF2Q9Y5A9 579 aaKnown RBP2.34□□□□□ -2.03
HDAC9-209ENST00000425071 IGLV4-69A0A075B6H9 119 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 IGKV2-28A0A075B6P5 120 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 TRGV2A0A075B6R0 118 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 TRAV8-1A0A0A6YYK1 113 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 TRAV10A0A0B4J240 114 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 NUPR2A6NF83 97 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 A8MWV9 139 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 B4DEV8 164 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 IGKV2D-28P01615 120 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 MT-ND4LP03901 98 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 S100A8P05109 93 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 ATP5G1P05496 136 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 SMIM17P0DL12 118 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 ASIPP42127 132 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 CEBPGP53567 150 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 FXYD7P58549 80 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 DAD1P61803 113 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 CACNG7P62955 275 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 GNG5P63218 68 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 FAM231DQ6ZW35 169 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 C1orf158Q8N1D5 194 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 ZFAND2AQ8N6M9 145 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 FRZBQ92765 325 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 BTF3L4Q96K17 158 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 SMIM7Q9BQ49 75 aa2.33□□□□□ -2.04
HDAC9-209ENST00000425071 IL36BQ9NZH7 164 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms