RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 ZFP2Q6ZN57 461 aa13.63□□□□□ -0.23
RBFOX1-204ENST00000422070 ATOH7Q8N100 152 aa13.63□□□□□ -0.23
RBFOX1-204ENST00000422070 TOMM6Q96B49 74 aa13.63□□□□□ -0.23
RBFOX1-204ENST00000422070 KIR2DL4Q99706 377 aa13.63□□□□□ -0.23
RBFOX1-204ENST00000422070 NIPBLQ6KC79 2804 aaeCLIP13.63□□□□□ -0.23
RBFOX1-204ENST00000422070 DAZ2Q13117 558 aaKnown RBP13.62□□□□□ -0.23
RBFOX1-204ENST00000422070 EREGO14944 169 aa13.61□□□□□ -0.23
RBFOX1-204ENST00000422070 SNHG12Q9BXW3 62 aa13.61□□□□□ -0.23
RBFOX1-204ENST00000422070 MRPL16Q9NX20 251 aaKnown RBP13.61□□□□□ -0.23
RBFOX1-204ENST00000422070 H0Y8G0 127 aa13.6□□□□□ -0.23
RBFOX1-204ENST00000422070 C18orf15Q96N68 181 aa13.6□□□□□ -0.23
RBFOX1-204ENST00000422070 MIEN1Q9BRT3 115 aa13.6□□□□□ -0.23
RBFOX1-204ENST00000422070 IGHV3-53P01767 116 aa13.59□□□□□ -0.23
RBFOX1-204ENST00000422070 PLAC8L1A1L4L8 177 aa13.59□□□□□ -0.23
RBFOX1-204ENST00000422070 DLEU1O43261 78 aa13.59□□□□□ -0.23
RBFOX1-204ENST00000422070 IGLL1P15814 213 aa13.59□□□□□ -0.23
RBFOX1-204ENST00000422070 RIPPLY3P57055 190 aa13.59□□□□□ -0.23
RBFOX1-204ENST00000422070 BAHCC1Q9P281 2608 aa13.58□□□□□ -0.23
RBFOX1-204ENST00000422070 TENM1Q9UKZ4 2725 aa13.58□□□□□ -0.24
RBFOX1-204ENST00000422070 CYSRT1A8MQ03 144 aa13.58□□□□□ -0.24
RBFOX1-204ENST00000422070 HSBP1L1C9JCN9 74 aa13.58□□□□□ -0.24
RBFOX1-204ENST00000422070 IGLC3P0DOY3 106 aa13.58□□□□□ -0.24
RBFOX1-204ENST00000422070 RHOHQ15669 191 aa13.58□□□□□ -0.24
RBFOX1-204ENST00000422070 RRN3P1Q2M238 152 aa13.58□□□□□ -0.24
RBFOX1-204ENST00000422070 MAJINQ3KP22 176 aa13.58□□□□□ -0.24
RBFOX1-204ENST00000422070 C2orf66Q6UXQ4 117 aa13.58□□□□□ -0.24
RBFOX1-204ENST00000422070 TEP1Q99973 2627 aaKnown RBP13.58□□□□□ -0.24
RBFOX1-204ENST00000422070 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.57□□□□□ -0.24
RBFOX1-204ENST00000422070 ODF1Q14990 250 aa13.57□□□□□ -0.24
RBFOX1-204ENST00000422070 DNAJC30Q96LL9 226 aa13.57□□□□□ -0.24
RBFOX1-204ENST00000422070 OVOL2Q9BRP0 275 aa13.57□□□□□ -0.24
RBFOX1-204ENST00000422070 UQCR10Q9UDW1 63 aa13.57□□□□□ -0.24
RBFOX1-204ENST00000422070 TRGV1A0A0A0MS02 117 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 I3L3M4 83 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 ZMAT4Q9H898 229 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 CYSLTR1Q9Y271 337 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 TRAV4A0A0B4J268 109 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 CIDEAO60543 219 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 PRSS1P07477 247 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 NEGR1Q7Z3B1 354 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 ERASQ7Z444 233 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 PMCHL2Q9BQD1 86 aa13.56□□□□□ -0.24
RBFOX1-204ENST00000422070 NACAE9PAV3 2078 aa13.55□□□□□ -0.24
RBFOX1-204ENST00000422070 JMJD1CQ15652 2540 aa13.55□□□□□ -0.24
RBFOX1-204ENST00000422070 TRAV12-1A0A0B4J245 112 aa13.55□□□□□ -0.24
RBFOX1-204ENST00000422070 SCGB3A1Q96QR1 104 aa13.55□□□□□ -0.24
RBFOX1-204ENST00000422070 ATRQ13535 2644 aa13.54□□□□□ -0.24
RBFOX1-204ENST00000422070 IGHV3-73A0A0B4J1V6 119 aa13.54□□□□□ -0.24
RBFOX1-204ENST00000422070 hDV102S1A0JD36 115 aa13.54□□□□□ -0.24
RBFOX1-204ENST00000422070 SHISA2Q6UWI4 295 aa13.54□□□□□ -0.24
RBFOX1-204ENST00000422070 OR4C5Q8NGB2 326 aa13.54□□□□□ -0.24
RBFOX1-204ENST00000422070 ZNF25P17030 456 aaPredicted RBP13.53□□□□□ -0.24
RBFOX1-204ENST00000422070 Q6ZN92 141 aa13.53□□□□□ -0.24
RBFOX1-204ENST00000422070 Q6ZSN1 163 aa13.53□□□□□ -0.24
RBFOX1-204ENST00000422070 Q6ZTI0 123 aa13.53□□□□□ -0.24
RBFOX1-204ENST00000422070 SMIM9A6NGZ8 99 aa13.53□□□□□ -0.24
RBFOX1-204ENST00000422070 TSHBP01222 138 aa13.53□□□□□ -0.24
RBFOX1-204ENST00000422070 TIMM17AQ99595 171 aa13.53□□□□□ -0.24
RBFOX1-204ENST00000422070 NOP10Q9NPE3 64 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-204ENST00000422070 TNFRSF18Q9Y5U5 241 aa13.53□□□□□ -0.24
RBFOX1-204ENST00000422070 VWFP04275 2813 aa13.52□□□□□ -0.24
RBFOX1-204ENST00000422070 A0A087WX48 190 aa13.52□□□□□ -0.25
RBFOX1-204ENST00000422070 NEXN-AS1Q8NBZ9 246 aa13.52□□□□□ -0.25
RBFOX1-204ENST00000422070 DKK2Q9UBU2 259 aa13.52□□□□□ -0.25
RBFOX1-204ENST00000422070 TP53TG1Q9Y2A0 90 aa13.52□□□□□ -0.25
RBFOX1-204ENST00000422070 TRBV10-1A0A0K0K1A3 114 aa13.51□□□□□ -0.25
RBFOX1-204ENST00000422070 IGIPA6NJ69 53 aa13.51□□□□□ -0.25
RBFOX1-204ENST00000422070 APOC4P55056 127 aa13.51□□□□□ -0.25
RBFOX1-204ENST00000422070 PRIMA1Q86XR5 153 aa13.51□□□□□ -0.25
RBFOX1-204ENST00000422070 C3orf56Q8N813 242 aa13.51□□□□□ -0.25
RBFOX1-204ENST00000422070 TMEM141Q96I45 108 aa13.51□□□□□ -0.25
RBFOX1-204ENST00000422070 P0DMU3 169 aa13.5□□□□□ -0.25
RBFOX1-204ENST00000422070 FAM231AP0DMU4 169 aa13.5□□□□□ -0.25
RBFOX1-204ENST00000422070 FAM231CP0DMU5 169 aa13.5□□□□□ -0.25
RBFOX1-204ENST00000422070 BAALCQ8WXS3 180 aa13.5□□□□□ -0.25
RBFOX1-204ENST00000422070 ZNF479Q96JC4 524 aa13.5□□□□□ -0.25
RBFOX1-204ENST00000422070 F8VRH5 84 aa13.49□□□□□ -0.25
RBFOX1-204ENST00000422070 DPM2O94777 84 aa13.49□□□□□ -0.25
RBFOX1-204ENST00000422070 IGKCP01834 107 aa13.49□□□□□ -0.25
RBFOX1-204ENST00000422070 PLNP26678 52 aa13.49□□□□□ -0.25
RBFOX1-204ENST00000422070 ANKRD39Q53RE8 183 aa13.49□□□□□ -0.25
RBFOX1-204ENST00000422070 C20orf203Q8NBC4 194 aa13.49□□□□□ -0.25
RBFOX1-204ENST00000422070 X6R8D5 127 aa13.48□□□□□ -0.25
RBFOX1-204ENST00000422070 COL5A1-AS1Q5SY13 56 aa13.47□□□□□ -0.25
RBFOX1-204ENST00000422070 C12orf54Q6X4T0 127 aa13.47□□□□□ -0.25
RBFOX1-204ENST00000422070 LINC00612Q8N6U2 182 aa13.47□□□□□ -0.25
RBFOX1-204ENST00000422070 MRPL35Q9NZE8 188 aaKnown RBP13.47□□□□□ -0.25
RBFOX1-204ENST00000422070 HHLA3Q9XRX5 114 aa13.47□□□□□ -0.25
RBFOX1-204ENST00000422070 K7EQD1 137 aa13.47□□□□□ -0.25
RBFOX1-204ENST00000422070 NPSP0C0P6 89 aa13.46□□□□□ -0.26
RBFOX1-204ENST00000422070 RPL39P62891 51 aaKnown RBP13.46□□□□□ -0.26
RBFOX1-204ENST00000422070 TRBV7-3A0A075B6L6 115 aa13.45□□□□□ -0.26
RBFOX1-204ENST00000422070 TRGV2A0A075B6R0 118 aa13.45□□□□□ -0.26
RBFOX1-204ENST00000422070 GAGE12BA1L429 117 aa13.45□□□□□ -0.26
RBFOX1-204ENST00000422070 GAGE7O76087 117 aa13.45□□□□□ -0.26
RBFOX1-204ENST00000422070 GAGE12FP0CL80 117 aa13.45□□□□□ -0.26
RBFOX1-204ENST00000422070 GAGE12GP0CL81 117 aa13.45□□□□□ -0.26
RBFOX1-204ENST00000422070 GAGE12IP0CL82 117 aa13.45□□□□□ -0.26
RBFOX1-204ENST00000422070 COX8AP10176 69 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms