RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 MAP1LC3B2A6NCE7 125 aa10.8□□□□□ -0.68
UPF3AP3-201ENST00000420996 CXCL1P09341 107 aa10.8□□□□□ -0.68
UPF3AP3-201ENST00000420996 CLRN3Q8NCR9 226 aa10.8□□□□□ -0.68
UPF3AP3-201ENST00000420996 MAP1LC3BQ9GZQ8 125 aa10.8□□□□□ -0.68
UPF3AP3-201ENST00000420996 VAX2Q9UIW0 290 aa10.8□□□□□ -0.68
UPF3AP3-201ENST00000420996 GIPP09681 153 aaPredicted RBP10.79□□□□□ -0.68
UPF3AP3-201ENST00000420996 AKR1C3P42330 323 aa10.79□□□□□ -0.68
UPF3AP3-201ENST00000420996 RBX1P62877 108 aa10.79□□□□□ -0.68
UPF3AP3-201ENST00000420996 CST9LP1Q5W188 147 aa10.79□□□□□ -0.68
UPF3AP3-201ENST00000420996 LINC00269Q8N2A0 174 aa10.79□□□□□ -0.68
UPF3AP3-201ENST00000420996 F5H697 171 aa10.78□□□□□ -0.68
UPF3AP3-201ENST00000420996 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
UPF3AP3-201ENST00000420996 SSBP4Q9BWG4 385 aaPredicted RBP10.78□□□□□ -0.68
UPF3AP3-201ENST00000420996 FXYD6-FXYD2A0A087WZ82 144 aa10.77□□□□□ -0.69
UPF3AP3-201ENST00000420996 G3V3Q6 166 aa10.77□□□□□ -0.69
UPF3AP3-201ENST00000420996 SNAI2O43623 268 aa10.77□□□□□ -0.69
UPF3AP3-201ENST00000420996 GAGE6Q13070 117 aa10.77□□□□□ -0.69
UPF3AP3-201ENST00000420996 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.69
UPF3AP3-201ENST00000420996 STOML3Q8TAV4 291 aa10.77□□□□□ -0.69
UPF3AP3-201ENST00000420996 DERL1Q9BUN8 251 aa10.77□□□□□ -0.69
UPF3AP3-201ENST00000420996 TRBV25-1A0A075B6N4 114 aa10.76□□□□□ -0.69
UPF3AP3-201ENST00000420996 S100A9P06702 114 aaKnown RBP10.76□□□□□ -0.69
UPF3AP3-201ENST00000420996 OR5AL1P0C617 328 aa10.76□□□□□ -0.69
UPF3AP3-201ENST00000420996 CNBPP62633 177 aaKnown RBP10.76□□□□□ -0.69
UPF3AP3-201ENST00000420996 RGS21Q2M5E4 152 aa10.76□□□□□ -0.69
UPF3AP3-201ENST00000420996 SPANXN1Q5VSR9 72 aa10.76□□□□□ -0.69
UPF3AP3-201ENST00000420996 MUC21A0A0G2JKD1 596 aa10.75□□□□□ -0.69
UPF3AP3-201ENST00000420996 MUC21A0A140T8X8 626 aa10.75□□□□□ -0.69
UPF3AP3-201ENST00000420996 IQCJQ1A5X6 159 aa10.75□□□□□ -0.69
UPF3AP3-201ENST00000420996 KIF25-AS1Q9Y6Z4 181 aa10.75□□□□□ -0.69
UPF3AP3-201ENST00000420996 PAGE4O60829 102 aa10.74□□□□□ -0.69
UPF3AP3-201ENST00000420996 REG3AQ06141 175 aa10.74□□□□□ -0.69
UPF3AP3-201ENST00000420996 RNF185Q96GF1 192 aa10.74□□□□□ -0.69
UPF3AP3-201ENST00000420996 MLST8Q9BVC4 326 aa10.74□□□□□ -0.69
UPF3AP3-201ENST00000420996 IGLV10-54A0A075B6I4 117 aa10.73□□□□□ -0.69
UPF3AP3-201ENST00000420996 TRAV8-4A0A0B4J246 113 aa10.73□□□□□ -0.69
UPF3AP3-201ENST00000420996 hDV102S1A0JD36 115 aa10.73□□□□□ -0.69
UPF3AP3-201ENST00000420996 P01737 135 aa10.73□□□□□ -0.69
UPF3AP3-201ENST00000420996 SMIM17P0DL12 118 aa10.73□□□□□ -0.69
UPF3AP3-201ENST00000420996 BAGE2Q86Y30 109 aa10.73□□□□□ -0.69
UPF3AP3-201ENST00000420996 DPH3Q96FX2 82 aa10.73□□□□□ -0.69
UPF3AP3-201ENST00000420996 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
UPF3AP3-201ENST00000420996 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.72□□□□□ -0.69
UPF3AP3-201ENST00000420996 IGHV1-24A0A0C4DH33 117 aa10.72□□□□□ -0.69
UPF3AP3-201ENST00000420996 SSTP61278 116 aa10.72□□□□□ -0.69
UPF3AP3-201ENST00000420996 AP1S3Q96PC3 154 aa10.72□□□□□ -0.69
UPF3AP3-201ENST00000420996 CYTL1Q9NRR1 136 aa10.72□□□□□ -0.69
UPF3AP3-201ENST00000420996 AP5S1Q9NUS5 200 aa10.72□□□□□ -0.69
UPF3AP3-201ENST00000420996 A0A087WYN8 130 aa10.71□□□□□ -0.69
UPF3AP3-201ENST00000420996 A0A1B0GUV1 79 aa10.7□□□□□ -0.7
UPF3AP3-201ENST00000420996 SCO2A0A1W2PP80 73 aa10.7□□□□□ -0.7
UPF3AP3-201ENST00000420996 SMLR1H3BR10 107 aa10.7□□□□□ -0.7
UPF3AP3-201ENST00000420996 SLPIP03973 132 aa10.7□□□□□ -0.7
UPF3AP3-201ENST00000420996 C20orf203Q8NBC4 194 aa10.7□□□□□ -0.7
UPF3AP3-201ENST00000420996 M0QY20 66 aa10.69□□□□□ -0.7
UPF3AP3-201ENST00000420996 CHTF8P0CG12 524 aa10.69□□□□□ -0.7
UPF3AP3-201ENST00000420996 GZMBP10144 247 aa10.69□□□□□ -0.7
UPF3AP3-201ENST00000420996 SPACA4Q8TDM5 124 aa10.69□□□□□ -0.7
UPF3AP3-201ENST00000420996 H7C1H1 209 aa10.68□□□□□ -0.7
UPF3AP3-201ENST00000420996 SFT2D1Q8WV19 159 aa10.68□□□□□ -0.7
UPF3AP3-201ENST00000420996 MBD3L1Q8WWY6 194 aa10.68□□□□□ -0.7
UPF3AP3-201ENST00000420996 TMEM243Q9BU79 118 aa10.68□□□□□ -0.7
UPF3AP3-201ENST00000420996 IGLV4-60A0A075B6I1 120 aa10.67□□□□□ -0.7
UPF3AP3-201ENST00000420996 PFDN1O60925 122 aa10.67□□□□□ -0.7
UPF3AP3-201ENST00000420996 MGPP08493 103 aa10.67□□□□□ -0.7
UPF3AP3-201ENST00000420996 TMUB2Q71RG4 321 aa10.67□□□□□ -0.7
UPF3AP3-201ENST00000420996 PLAC8Q9NZF1 115 aa10.67□□□□□ -0.7
UPF3AP3-201ENST00000420996 ARPC5O15511 151 aa10.66□□□□□ -0.7
UPF3AP3-201ENST00000420996 RAB5CP51148 216 aa10.66□□□□□ -0.7
UPF3AP3-201ENST00000420996 SUMO4Q6EEV6 95 aa10.66□□□□□ -0.7
UPF3AP3-201ENST00000420996 C7orf33Q8WU49 177 aa10.66□□□□□ -0.7
UPF3AP3-201ENST00000420996 GFRA4Q9GZZ7 299 aa10.66□□□□□ -0.7
UPF3AP3-201ENST00000420996 DPH3P1Q9H4G8 78 aa10.66□□□□□ -0.7
UPF3AP3-201ENST00000420996 PHOX2AO14813 284 aa10.65□□□□□ -0.7
UPF3AP3-201ENST00000420996 NKX2-5P52952 324 aaPredicted RBP10.65□□□□□ -0.7
UPF3AP3-201ENST00000420996 FAM213BQ8TBF2 198 aa10.65□□□□□ -0.7
UPF3AP3-201ENST00000420996 A0A1B0GV50 99 aa10.64□□□□□ -0.71
UPF3AP3-201ENST00000420996 UMAD1C9J7I0 102 aa10.64□□□□□ -0.71
UPF3AP3-201ENST00000420996 IGLC6P0CF74 106 aa10.64□□□□□ -0.71
UPF3AP3-201ENST00000420996 WDR73Q6P4I2 378 aa10.64□□□□□ -0.71
UPF3AP3-201ENST00000420996 RASL11AQ6T310 242 aa10.64□□□□□ -0.71
UPF3AP3-201ENST00000420996 FER1L6-AS1Q8NA97 138 aa10.64□□□□□ -0.71
UPF3AP3-201ENST00000420996 PGLYRP4Q96LB8 373 aa10.64□□□□□ -0.71
UPF3AP3-201ENST00000420996 RPL35P42766 123 aaKnown RBP10.63□□□□□ -0.71
UPF3AP3-201ENST00000420996 CACNG7P62955 275 aa10.63□□□□□ -0.71
UPF3AP3-201ENST00000420996 CFAP161Q6P656 301 aa10.63□□□□□ -0.71
UPF3AP3-201ENST00000420996 KCNRGQ8N5I3 272 aa10.63□□□□□ -0.71
UPF3AP3-201ENST00000420996 LINC01600Q96MT4 127 aa10.63□□□□□ -0.71
UPF3AP3-201ENST00000420996 TPPP3Q9BW30 176 aa10.63□□□□□ -0.71
UPF3AP3-201ENST00000420996 TNXBP22105 4242 aa10.63□□□□□ -0.71
UPF3AP3-201ENST00000420996 SULT1A2P50226 295 aa10.62□□□□□ -0.71
UPF3AP3-201ENST00000420996 RPS20P60866 119 aaKnown RBP10.62□□□□□ -0.71
UPF3AP3-201ENST00000420996 COX6A2Q02221 97 aa10.62□□□□□ -0.71
UPF3AP3-201ENST00000420996 NIT2Q9NQR4 276 aa10.62□□□□□ -0.71
UPF3AP3-201ENST00000420996 UBE2L6O14933 153 aa10.61□□□□□ -0.71
UPF3AP3-201ENST00000420996 RPS10P46783 165 aaKnown RBP10.61□□□□□ -0.71
UPF3AP3-201ENST00000420996 C15orf56Q8N910 161 aa10.61□□□□□ -0.71
UPF3AP3-201ENST00000420996 OR2D3Q8NGH3 330 aa10.61□□□□□ -0.71
UPF3AP3-201ENST00000420996 GAGE12HA6NDE8 117 aa10.6□□□□□ -0.71
UPF3AP3-201ENST00000420996 F2Z2F3 143 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms