RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 ZNF580Q9UK33 172 aa11.77□□□□□ -0.53
TRIM13-204ENST00000420995 SORL1Q92673 2214 aa11.77□□□□□ -0.53
TRIM13-204ENST00000420995 CREBBPQ92793 2442 aa11.77□□□□□ -0.53
TRIM13-204ENST00000420995 A4D1N5 150 aa11.76□□□□□ -0.53
TRIM13-204ENST00000420995 MT-ATP8P03928 68 aa11.76□□□□□ -0.53
TRIM13-204ENST00000420995 CFHR3Q02985 330 aa11.76□□□□□ -0.53
TRIM13-204ENST00000420995 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
TRIM13-204ENST00000420995 XGP55808 180 aa11.75□□□□□ -0.53
TRIM13-204ENST00000420995 TMEM223A0PJW6 202 aa11.75□□□□□ -0.53
TRIM13-204ENST00000420995 H7C2G1 150 aa11.75□□□□□ -0.53
TRIM13-204ENST00000420995 K7EMT4 169 aa11.75□□□□□ -0.53
TRIM13-204ENST00000420995 CKS1BP61024 79 aa11.75□□□□□ -0.53
TRIM13-204ENST00000420995 NSUN5P1Q3KNT7 163 aa11.75□□□□□ -0.53
TRIM13-204ENST00000420995 PPDPFLQ8WWR9 84 aa11.75□□□□□ -0.53
TRIM13-204ENST00000420995 USP9XQ93008 2570 aaPredicted RBP11.75□□□□□ -0.53
TRIM13-204ENST00000420995 TRBV20-1A0A075B6N2 111 aa11.74□□□□□ -0.53
TRIM13-204ENST00000420995 TRAV2A0A0B4J234 112 aa11.74□□□□□ -0.53
TRIM13-204ENST00000420995 A0A0J9YX75 114 aa11.74□□□□□ -0.53
TRIM13-204ENST00000420995 SPINK8P0C7L1 97 aa11.74□□□□□ -0.53
TRIM13-204ENST00000420995 IGHV4-30-2A0A087WSY4 118 aa11.74□□□□□ -0.53
TRIM13-204ENST00000420995 A8MWV9 139 aa11.74□□□□□ -0.53
TRIM13-204ENST00000420995 ZNF22P17026 224 aaPredicted RBP11.74□□□□□ -0.53
TRIM13-204ENST00000420995 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
TRIM13-204ENST00000420995 A0A0J9YXV3 536 aa11.73□□□□□ -0.53
TRIM13-204ENST00000420995 AVPP01185 164 aa11.73□□□□□ -0.53
TRIM13-204ENST00000420995 TCTEX1D4Q5JR98 221 aa11.73□□□□□ -0.53
TRIM13-204ENST00000420995 C10orf105Q8TEF2 133 aa11.73□□□□□ -0.53
TRIM13-204ENST00000420995 RHOHQ15669 191 aa11.73□□□□□ -0.53
TRIM13-204ENST00000420995 Q6ZUT4 128 aa11.73□□□□□ -0.53
TRIM13-204ENST00000420995 TRPT1Q86TN4 253 aaKnown RBP11.73□□□□□ -0.53
TRIM13-204ENST00000420995 C20orf203Q8NBC4 194 aa11.73□□□□□ -0.53
TRIM13-204ENST00000420995 IGHV1OR15-1A0A075B7D0 117 aa11.73□□□□□ -0.53
TRIM13-204ENST00000420995 RHODO00212 210 aa11.73□□□□□ -0.53
TRIM13-204ENST00000420995 LEPROTO15243 131 aa11.73□□□□□ -0.53
TRIM13-204ENST00000420995 PSMB8P28062 276 aa11.72□□□□□ -0.53
TRIM13-204ENST00000420995 SBSPONQ8IVN8 264 aa11.72□□□□□ -0.53
TRIM13-204ENST00000420995 CACNA1AO00555 2505 aa11.72□□□□□ -0.53
TRIM13-204ENST00000420995 DOPEY2Q9Y3R5 2298 aa11.72□□□□□ -0.53
TRIM13-204ENST00000420995 ADARB2-AS1A8MUL3 147 aa11.72□□□□□ -0.53
TRIM13-204ENST00000420995 CRYBA4P53673 196 aa11.72□□□□□ -0.53
TRIM13-204ENST00000420995 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
TRIM13-204ENST00000420995 MUSTN1Q8IVN3 82 aa11.72□□□□□ -0.53
TRIM13-204ENST00000420995 CCL19Q99731 98 aa11.72□□□□□ -0.53
TRIM13-204ENST00000420995 IGLV4-3A0A075B6K6 122 aa11.71□□□□□ -0.53
TRIM13-204ENST00000420995 IGHV3-73A0A0B4J1V6 119 aa11.71□□□□□ -0.53
TRIM13-204ENST00000420995 IGHV3-33P01772 117 aa11.71□□□□□ -0.54
TRIM13-204ENST00000420995 MSMBP08118 114 aa11.71□□□□□ -0.54
TRIM13-204ENST00000420995 TMEM263Q8WUH6 116 aaKnown RBP11.71□□□□□ -0.54
TRIM13-204ENST00000420995 C9JAW5 83 aa11.7□□□□□ -0.54
TRIM13-204ENST00000420995 I3L3M4 83 aa11.7□□□□□ -0.54
TRIM13-204ENST00000420995 ELANEP08246 267 aa11.7□□□□□ -0.54
TRIM13-204ENST00000420995 HTN1P15515 57 aa11.7□□□□□ -0.54
TRIM13-204ENST00000420995 DUX5Q96PT3 197 aa11.7□□□□□ -0.54
TRIM13-204ENST00000420995 ODF3Q96PU9 254 aa11.7□□□□□ -0.54
TRIM13-204ENST00000420995 VCX2Q9H322 139 aa11.7□□□□□ -0.54
TRIM13-204ENST00000420995 CENPEQ02224 2701 aa11.7□□□□□ -0.54
TRIM13-204ENST00000420995 K7EQG2 157 aa11.7□□□□□ -0.54
TRIM13-204ENST00000420995 ZANQ9Y493 2812 aa11.7□□□□□ -0.54
TRIM13-204ENST00000420995 SLC25A20O43772 301 aa11.69□□□□□ -0.54
TRIM13-204ENST00000420995 IGHV4-59P01825 116 aa11.69□□□□□ -0.54
TRIM13-204ENST00000420995 ATP5J2P56134 94 aa11.69□□□□□ -0.54
TRIM13-204ENST00000420995 SYNJ2BPP57105 145 aa11.69□□□□□ -0.54
TRIM13-204ENST00000420995 CEMP1Q6PRD7 247 aaPredicted RBP11.69□□□□□ -0.54
TRIM13-204ENST00000420995 RNASE13Q5GAN3 156 aaKnown RBP11.69□□□□□ -0.54
TRIM13-204ENST00000420995 SPXQ9BT56 116 aa11.69□□□□□ -0.54
TRIM13-204ENST00000420995 PROK1P58294 105 aa11.68□□□□□ -0.54
TRIM13-204ENST00000420995 ERG28Q9UKR5 140 aa11.68□□□□□ -0.54
TRIM13-204ENST00000420995 Q1RN00 199 aa11.68□□□□□ -0.54
TRIM13-204ENST00000420995 GEMIN7Q9H840 131 aaKnown RBP11.68□□□□□ -0.54
TRIM13-204ENST00000420995 MYO18BQ8IUG5 2567 aa11.68□□□□□ -0.54
TRIM13-204ENST00000420995 A0A0J9YXY3 114 aa11.67□□□□□ -0.54
TRIM13-204ENST00000420995 RBMY1A1P0DJD3 496 aaKnown RBP11.67□□□□□ -0.54
TRIM13-204ENST00000420995 RBMY1CP0DJD4 496 aa11.67□□□□□ -0.54
TRIM13-204ENST00000420995 RBMY1FQ15415 496 aaKnown RBP11.67□□□□□ -0.54
TRIM13-204ENST00000420995 CUBNO60494 3623 aa11.67□□□□□ -0.54
TRIM13-204ENST00000420995 A0A0B4J2C4 111 aa11.67□□□□□ -0.54
TRIM13-204ENST00000420995 PRM2P04554 102 aa11.67□□□□□ -0.54
TRIM13-204ENST00000420995 IGHV3-30-3P0DP02 117 aa11.67□□□□□ -0.54
TRIM13-204ENST00000420995 CD28P10747 220 aa11.67□□□□□ -0.54
TRIM13-204ENST00000420995 FAM104AQ969W3 186 aa11.67□□□□□ -0.54
TRIM13-204ENST00000420995 TRAV8-3A0A0A6YYJ7 113 aa11.66□□□□□ -0.54
TRIM13-204ENST00000420995 BEX4Q9NWD9 120 aaPredicted RBP11.66□□□□□ -0.54
TRIM13-204ENST00000420995 Q9UF83 564 aa11.66□□□□□ -0.54
TRIM13-204ENST00000420995 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
TRIM13-204ENST00000420995 FBN2P35556 2912 aa11.66□□□□□ -0.54
TRIM13-204ENST00000420995 ZFYVE26Q68DK2 2539 aa11.66□□□□□ -0.54
TRIM13-204ENST00000420995 M0R2P5 195 aa11.66□□□□□ -0.54
TRIM13-204ENST00000420995 ACACBO00763 2458 aa11.65□□□□□ -0.54
TRIM13-204ENST00000420995 TRAV26-1A0A087WT03 109 aa11.65□□□□□ -0.54
TRIM13-204ENST00000420995 CLUHP3Q96NS8 147 aa11.65□□□□□ -0.54
TRIM13-204ENST00000420995 DOPEY1Q5JWR5 2465 aa11.65□□□□□ -0.54
TRIM13-204ENST00000420995 DEFB112Q30KQ8 113 aa11.65□□□□□ -0.54
TRIM13-204ENST00000420995 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
TRIM13-204ENST00000420995 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
TRIM13-204ENST00000420995 Q5PR19 223 aa11.64□□□□□ -0.55
TRIM13-204ENST00000420995 POLQO75417 2590 aa11.63□□□□□ -0.55
TRIM13-204ENST00000420995 A8MZ25 164 aa11.63□□□□□ -0.55
TRIM13-204ENST00000420995 LITAFQ99732 161 aa11.63□□□□□ -0.55
TRIM13-204ENST00000420995 TRGV11A0A075B6L2 103 aa11.63□□□□□ -0.55
TRIM13-204ENST00000420995 PRSS2P07478 247 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms