RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TRBV6-8A0A0A6YYG3 113 aa11.37□□□□□ -0.59
MSH6-203ENST00000420813 SNAI2O43623 268 aa11.37□□□□□ -0.59
MSH6-203ENST00000420813 ZNF56Q15929 161 aa11.37□□□□□ -0.59
MSH6-203ENST00000420813 OR10AG1Q8NH19 301 aa11.37□□□□□ -0.59
MSH6-203ENST00000420813 FAM213BQ8TBF2 198 aa11.37□□□□□ -0.59
MSH6-203ENST00000420813 SSBP4Q9BWG4 385 aaPredicted RBP11.37□□□□□ -0.59
MSH6-203ENST00000420813 SCO2A0A1W2PP80 73 aa11.36□□□□□ -0.59
MSH6-203ENST00000420813 OR5AL1P0C617 328 aa11.36□□□□□ -0.59
MSH6-203ENST00000420813 RPL19P84098 196 aaKnown RBP11.36□□□□□ -0.59
MSH6-203ENST00000420813 LINC01620Q4KN68 170 aa11.36□□□□□ -0.59
MSH6-203ENST00000420813 C14orf177Q52M58 125 aa11.36□□□□□ -0.59
MSH6-203ENST00000420813 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
MSH6-203ENST00000420813 BAGE2Q86Y30 109 aa11.36□□□□□ -0.59
MSH6-203ENST00000420813 NEXN-AS1Q8NBZ9 246 aa11.36□□□□□ -0.59
MSH6-203ENST00000420813 TMEM262E9PQX1 116 aa11.35□□□□□ -0.59
MSH6-203ENST00000420813 J3QL48 77 aa11.35□□□□□ -0.59
MSH6-203ENST00000420813 S100A1P23297 94 aa11.35□□□□□ -0.59
MSH6-203ENST00000420813 PKIAP61925 76 aa11.35□□□□□ -0.59
MSH6-203ENST00000420813 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.35□□□□□ -0.59
MSH6-203ENST00000420813 DEFB104AQ8WTQ1 72 aa11.35□□□□□ -0.59
MSH6-203ENST00000420813 CHAC1Q9BUX1 264 aa11.35□□□□□ -0.59
MSH6-203ENST00000420813 C1orf43Q9BWL3 253 aa11.35□□□□□ -0.59
MSH6-203ENST00000420813 CRPP02741 224 aa11.34□□□□□ -0.59
MSH6-203ENST00000420813 TMEM97Q5BJF2 176 aa11.34□□□□□ -0.59
MSH6-203ENST00000420813 SPANXN1Q5VSR9 72 aa11.34□□□□□ -0.59
MSH6-203ENST00000420813 A0A1B0GV50 99 aa11.33□□□□□ -0.6
MSH6-203ENST00000420813 MPV17L2Q567V2 206 aa11.33□□□□□ -0.6
MSH6-203ENST00000420813 ENHOQ6UWT2 76 aa11.33□□□□□ -0.6
MSH6-203ENST00000420813 VAX2Q9UIW0 290 aa11.33□□□□□ -0.6
MSH6-203ENST00000420813 KRTAP29-1A8MX34 341 aaPredicted RBP11.32□□□□□ -0.6
MSH6-203ENST00000420813 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
MSH6-203ENST00000420813 C15orf54Q8N8G6 183 aa11.32□□□□□ -0.6
MSH6-203ENST00000420813 F5H697 171 aa11.31□□□□□ -0.6
MSH6-203ENST00000420813 ANGP03950 147 aaKnown RBP11.31□□□□□ -0.6
MSH6-203ENST00000420813 MIAQ16674 131 aa11.31□□□□□ -0.6
MSH6-203ENST00000420813 AP1S3Q96PC3 154 aa11.31□□□□□ -0.6
MSH6-203ENST00000420813 CHCHD5Q9BSY4 110 aa11.31□□□□□ -0.6
MSH6-203ENST00000420813 KIF25-AS1Q9Y6Z4 181 aa11.31□□□□□ -0.6
MSH6-203ENST00000420813 RAB19A4D1S5 217 aa11.3□□□□□ -0.6
MSH6-203ENST00000420813 TEX46H3BTG2 121 aa11.3□□□□□ -0.6
MSH6-203ENST00000420813 SMIM17P0DL12 118 aa11.3□□□□□ -0.6
MSH6-203ENST00000420813 RPL35P42766 123 aaKnown RBP11.3□□□□□ -0.6
MSH6-203ENST00000420813 CIRBP-AS1Q8TBR5 109 aa11.3□□□□□ -0.6
MSH6-203ENST00000420813 MUC21A0A0G2JKD1 596 aa11.29□□□□□ -0.6
MSH6-203ENST00000420813 MUC21A0A140T8X8 626 aa11.29□□□□□ -0.6
MSH6-203ENST00000420813 UQCC3Q6UW78 93 aa11.29□□□□□ -0.6
MSH6-203ENST00000420813 NTM-AS1Q6ZSK4 140 aa11.29□□□□□ -0.6
MSH6-203ENST00000420813 LYPD6BQ8NI32 183 aa11.29□□□□□ -0.6
MSH6-203ENST00000420813 C11orf52Q96A22 123 aa11.29□□□□□ -0.6
MSH6-203ENST00000420813 MANBALQ9NQG1 85 aa11.29□□□□□ -0.6
MSH6-203ENST00000420813 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
MSH6-203ENST00000420813 KRTAP10-4P60372 401 aaPredicted RBP11.28□□□□□ -0.6
MSH6-203ENST00000420813 PRR34Q9NV39 138 aa11.28□□□□□ -0.6
MSH6-203ENST00000420813 TRBV25-1A0A075B6N4 114 aa11.27□□□□□ -0.61
MSH6-203ENST00000420813 USP17L23D6RBM5 183 aa11.27□□□□□ -0.61
MSH6-203ENST00000420813 DERL1Q9BUN8 251 aa11.27□□□□□ -0.61
MSH6-203ENST00000420813 TRAV1-1A0A0B4J248 108 aa11.26□□□□□ -0.61
MSH6-203ENST00000420813 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
MSH6-203ENST00000420813 IGLC6P0CF74 106 aa11.26□□□□□ -0.61
MSH6-203ENST00000420813 RPS20P60866 119 aaKnown RBP11.26□□□□□ -0.61
MSH6-203ENST00000420813 SSTP61278 116 aa11.26□□□□□ -0.61
MSH6-203ENST00000420813 IQCJQ1A5X6 159 aa11.26□□□□□ -0.61
MSH6-203ENST00000420813 DGAT2L7PQ6IED9 249 aa11.26□□□□□ -0.61
MSH6-203ENST00000420813 GNG13Q9P2W3 67 aa11.26□□□□□ -0.61
MSH6-203ENST00000420813 H7C1H1 209 aa11.25□□□□□ -0.61
MSH6-203ENST00000420813 RBX1P62877 108 aa11.25□□□□□ -0.61
MSH6-203ENST00000420813 CENPWQ5EE01 88 aa11.25□□□□□ -0.61
MSH6-203ENST00000420813 SMIM12Q96EX1 92 aa11.25□□□□□ -0.61
MSH6-203ENST00000420813 M0QY20 66 aa11.24□□□□□ -0.61
MSH6-203ENST00000420813 CCL20P78556 96 aa11.24□□□□□ -0.61
MSH6-203ENST00000420813 KRTAP26-1Q6PEX3 210 aa11.24□□□□□ -0.61
MSH6-203ENST00000420813 FER1L6-AS1Q8NA97 138 aa11.24□□□□□ -0.61
MSH6-203ENST00000420813 DAZAP1Q96EP5 407 aaKnown RBP11.24□□□□□ -0.61
MSH6-203ENST00000420813 IGHV1-24A0A0C4DH33 117 aa11.23□□□□□ -0.61
MSH6-203ENST00000420813 C19orf71A6NCJ1 209 aa11.23□□□□□ -0.61
MSH6-203ENST00000420813 IFNA1P01562 189 aa11.23□□□□□ -0.61
MSH6-203ENST00000420813 PRSS1P07477 247 aa11.23□□□□□ -0.61
MSH6-203ENST00000420813 CACNG7P62955 275 aa11.23□□□□□ -0.61
MSH6-203ENST00000420813 GAGE6Q13070 117 aa11.23□□□□□ -0.61
MSH6-203ENST00000420813 LINC00269Q8N2A0 174 aa11.23□□□□□ -0.61
MSH6-203ENST00000420813 OR2D3Q8NGH3 330 aa11.23□□□□□ -0.61
MSH6-203ENST00000420813 FAM210AQ96ND0 272 aa11.23□□□□□ -0.61
MSH6-203ENST00000420813 LRP1Q07954 4544 aaKnown RBP11.22□□□□□ -0.61
MSH6-203ENST00000420813 MGPP08493 103 aa11.22□□□□□ -0.61
MSH6-203ENST00000420813 GZMBP10144 247 aa11.22□□□□□ -0.61
MSH6-203ENST00000420813 SUMO4Q6EEV6 95 aa11.22□□□□□ -0.61
MSH6-203ENST00000420813 CLPSL2Q6UWE3 100 aa11.22□□□□□ -0.61
MSH6-203ENST00000420813 C9orf163Q8N9P6 203 aa11.22□□□□□ -0.61
MSH6-203ENST00000420813 TPPP3Q9BW30 176 aa11.22□□□□□ -0.61
MSH6-203ENST00000420813 XKRY2A2RUG3 117 aa11.21□□□□□ -0.61
MSH6-203ENST00000420813 F2Z2F3 143 aa11.21□□□□□ -0.61
MSH6-203ENST00000420813 OXTP01178 125 aa11.21□□□□□ -0.61
MSH6-203ENST00000420813 GNG4P50150 75 aa11.21□□□□□ -0.61
MSH6-203ENST00000420813 PDE6DO43924 150 aa11.2□□□□□ -0.62
MSH6-203ENST00000420813 TAGLN2P37802 199 aaKnown RBP11.2□□□□□ -0.62
MSH6-203ENST00000420813 MEF2BQ02080 365 aaPredicted RBP11.2□□□□□ -0.62
MSH6-203ENST00000420813 REG3AQ06141 175 aa11.2□□□□□ -0.62
MSH6-203ENST00000420813 PEA15Q15121 130 aa11.2□□□□□ -0.62
MSH6-203ENST00000420813 CLRN3Q8NCR9 226 aa11.2□□□□□ -0.62
MSH6-203ENST00000420813 SMDT1Q9H4I9 107 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms