RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 FAM74A7A6NL05 159 aa4.61□□□□□ -1.67
RFX3-205ENST00000420720 UBE2D3P61077 147 aa4.61□□□□□ -1.67
RFX3-205ENST00000420720 UBE2D2P62837 147 aa4.61□□□□□ -1.67
RFX3-205ENST00000420720 Q0VG73 95 aa4.61□□□□□ -1.67
RFX3-205ENST00000420720 ATRAIDQ6UW56 229 aa4.61□□□□□ -1.67
RFX3-205ENST00000420720 ENHOQ6UWT2 76 aa4.61□□□□□ -1.67
RFX3-205ENST00000420720 HIST1H2BAQ96A08 127 aa4.61□□□□□ -1.67
RFX3-205ENST00000420720 C1orf43Q9BWL3 253 aa4.61□□□□□ -1.67
RFX3-205ENST00000420720 TRBV7-3A0A075B6L6 115 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 TRBV6-8A0A0A6YYG3 113 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 BORCS7-ASMTA0A0B4J1R7 106 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 TRBV10-1A0A0K0K1A3 114 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 CRPP02741 224 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 ANGP03950 147 aaKnown RBP4.6□□□□□ -1.67
RFX3-205ENST00000420720 HNRNPA3P51991 378 aaKnown RBP4.6□□□□□ -1.67
RFX3-205ENST00000420720 RPL37AP61513 92 aaKnown RBP4.6□□□□□ -1.67
RFX3-205ENST00000420720 UBE2G1P62253 170 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 ZNF674Q2M3X9 581 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 C14orf177Q52M58 125 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 MPV17L2Q567V2 206 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 FAM162BQ5T6X4 162 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 COX8CQ7Z4L0 72 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 ZFP82Q8N141 532 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 C15orf54Q8N8G6 183 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 MED28Q9H204 178 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 ZFP30Q9Y2G7 519 aa4.6□□□□□ -1.67
RFX3-205ENST00000420720 USP17L23D6RBM5 183 aa4.59□□□□□ -1.67
RFX3-205ENST00000420720 HLA-DQA1P01909 254 aa4.59□□□□□ -1.67
RFX3-205ENST00000420720 ZNF56Q15929 161 aa4.59□□□□□ -1.67
RFX3-205ENST00000420720 AKR1C8PQ5T2L2 129 aa4.59□□□□□ -1.67
RFX3-205ENST00000420720 INO80EQ8NBZ0 244 aaPredicted RBP4.59□□□□□ -1.67
RFX3-205ENST00000420720 NEXN-AS1Q8NBZ9 246 aa4.59□□□□□ -1.67
RFX3-205ENST00000420720 OR10G8Q8NGN5 311 aa4.59□□□□□ -1.67
RFX3-205ENST00000420720 DAZAP1Q96EP5 407 aaKnown RBP4.59□□□□□ -1.67
RFX3-205ENST00000420720 FMC1Q96HJ9 113 aa4.59□□□□□ -1.67
RFX3-205ENST00000420720 CHCHD5Q9BSY4 110 aa4.59□□□□□ -1.67
RFX3-205ENST00000420720 NKX6-2Q9C056 277 aaPredicted RBP4.59□□□□□ -1.67
RFX3-205ENST00000420720 FXYD6-FXYD2A0A087WZ82 144 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 MUC21A0A0G2JKD1 596 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 TRBV6-1A0A0K0K1D8 114 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 MUC21A0A140T8X8 626 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 MAP1LC3B2A6NCE7 125 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 PTTG1O95997 202 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 PRSS1P07477 247 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 RAB4BP61018 213 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 SSTP61278 116 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 RPL19P84098 196 aaKnown RBP4.58□□□□□ -1.68
RFX3-205ENST00000420720 CST9LP1Q5W188 147 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 CLPSL2Q6UWE3 100 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 MAP1LC3BQ9GZQ8 125 aa4.58□□□□□ -1.68
RFX3-205ENST00000420720 F5H697 171 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 PANO1I0J062 215 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 LTAP01374 205 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 GIPP09681 153 aaPredicted RBP4.57□□□□□ -1.68
RFX3-205ENST00000420720 AKR1C3P42330 323 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 GAGE6Q13070 117 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 DGAT2L7PQ6IED9 249 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 PRR27Q6MZM9 219 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 NTM-AS1Q6ZSK4 140 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 C9orf163Q8N9P6 203 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 OR10AG1Q8NH19 301 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 STOML3Q8TAV4 291 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 ZNF471Q9BX82 626 aaPredicted RBP4.57□□□□□ -1.68
RFX3-205ENST00000420720 LPAP08519 4548 aa4.57□□□□□ -1.68
RFX3-205ENST00000420720 PAGE4O60829 102 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 MT1HL1P0DM35 61 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 FHITP49789 147 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 PKIAP61925 76 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 RBX1P62877 108 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 MIAQ16674 131 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 SPANXN1Q5VSR9 72 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 KRTAP26-1Q6PEX3 210 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 LINC00269Q8N2A0 174 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.56□□□□□ -1.68
RFX3-205ENST00000420720 DERL1Q9BUN8 251 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 CYTL1Q9NRR1 136 aa4.56□□□□□ -1.68
RFX3-205ENST00000420720 IGLV10-54A0A075B6I4 117 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 A0A1B0GV50 99 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 SNAI2O43623 268 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 CXCL1P09341 107 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 RNF151Q2KHN1 245 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 TMEM97Q5BJF2 176 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 SDIM1Q6ZPB5 146 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 BAGE2Q86Y30 109 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 TCEAL7Q9BRU2 100 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 PRR34Q9NV39 138 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 VAX2Q9UIW0 290 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 KIF25-AS1Q9Y6Z4 181 aa4.55□□□□□ -1.68
RFX3-205ENST00000420720 TRBV25-1A0A075B6N4 114 aa4.54□□□□□ -1.68
RFX3-205ENST00000420720 G3V3Q6 166 aa4.54□□□□□ -1.68
RFX3-205ENST00000420720 ARPC5O15511 151 aa4.54□□□□□ -1.68
RFX3-205ENST00000420720 S100A9P06702 114 aaKnown RBP4.54□□□□□ -1.68
RFX3-205ENST00000420720 OR5AL1P0C617 328 aa4.54□□□□□ -1.68
RFX3-205ENST00000420720 SMIM17P0DL12 118 aa4.54□□□□□ -1.68
RFX3-205ENST00000420720 DPH3Q96FX2 82 aa4.54□□□□□ -1.68
RFX3-205ENST00000420720 MLST8Q9BVC4 326 aa4.54□□□□□ -1.68
RFX3-205ENST00000420720 IGHV1-24A0A0C4DH33 117 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 A0A0D9SG52 128 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 PFDN1O60925 122 aa4.53□□□□□ -1.68
RFX3-205ENST00000420720 MGPP08493 103 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms