RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 ZFHX3Q15911 3703 aa11.13□□□□□ -0.63
SEMA4D-204ENST00000420101 IGHV7-4-1A0A0J9YVY3 117 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 TMEM89A2RUT3 159 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 SLC25A29Q8N8R3 303 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 SMAD5-AS1Q9Y6J3 95 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 CELSR1Q9NYQ6 3014 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 TRBV7-9A0A0J9YWB2 115 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 A0A0J9YY99 117 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 NDUFA4O00483 81 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 SLC25A20O43772 301 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 NHLRC4P0CG21 123 aaPredicted RBP11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 MED14OSP0DP75 135 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
SEMA4D-204ENST00000420101 GCN1Q92616 2671 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-204ENST00000420101 B5MCH6 92 aa11.11□□□□□ -0.63
SEMA4D-204ENST00000420101 ELANEP08246 267 aa11.11□□□□□ -0.63
SEMA4D-204ENST00000420101 RPL13AP40429 203 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-204ENST00000420101 CLPSL1A2RUU4 121 aa11.1□□□□□ -0.63
SEMA4D-204ENST00000420101 LY6G6DO95868 133 aa11.1□□□□□ -0.63
SEMA4D-204ENST00000420101 IGHV3-30P01768 117 aa11.1□□□□□ -0.63
SEMA4D-204ENST00000420101 IGHV3-30-5P0DP03 117 aa11.1□□□□□ -0.63
SEMA4D-204ENST00000420101 TMEM141Q96I45 108 aa11.1□□□□□ -0.63
SEMA4D-204ENST00000420101 ITPR3Q14573 2671 aa11.1□□□□□ -0.63
SEMA4D-204ENST00000420101 PDZD2O15018 2839 aa11.1□□□□□ -0.63
SEMA4D-204ENST00000420101 BUB3O43684 328 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 KHDC1LQ5JSQ8 128 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 C2orf66Q6UXQ4 117 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 UNQ9165/PRO28630Q6UXU0 137 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 C9orf47Q6ZRZ4 202 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 OR10J6PQ8NGY7 276 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 PTH2Q96A98 100 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 DPH3P1Q9H4G8 78 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 A0A0B4J2C4 111 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 CFC1BP0CG36 223 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 CFC1P0CG37 223 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 PRB4P10163 310 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 Q8N2B8 174 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 RASL10AQ92737 203 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 ESM1Q9NQ30 184 aa11.09□□□□□ -0.63
SEMA4D-204ENST00000420101 UNC79Q9P2D8 2635 aa11.08□□□□□ -0.64
SEMA4D-204ENST00000420101 Q6ZSV7 163 aa11.08□□□□□ -0.64
SEMA4D-204ENST00000420101 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-204ENST00000420101 TRAV8-2A0A0B4J237 113 aa11.07□□□□□ -0.64
SEMA4D-204ENST00000420101 ATXN8Q156A1 80 aa11.07□□□□□ -0.64
SEMA4D-204ENST00000420101 PLEKHB2Q96CS7 222 aa11.07□□□□□ -0.64
SEMA4D-204ENST00000420101 TMEM126AQ9H061 195 aa11.07□□□□□ -0.64
SEMA4D-204ENST00000420101 H3BVH4 76 aa11.07□□□□□ -0.64
SEMA4D-204ENST00000420101 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
SEMA4D-204ENST00000420101 HECTD1Q9ULT8 2610 aa11.07□□□□□ -0.64
SEMA4D-204ENST00000420101 ZANQ9Y493 2812 aa11.06□□□□□ -0.64
SEMA4D-204ENST00000420101 FASNP49327 2511 aaKnown RBP11.06□□□□□ -0.64
SEMA4D-204ENST00000420101 RPL11P62913 178 aaKnown RBP11.06□□□□□ -0.64
SEMA4D-204ENST00000420101 PMVKQ15126 192 aa11.06□□□□□ -0.64
SEMA4D-204ENST00000420101 IGFL4Q6B9Z1 124 aa11.06□□□□□ -0.64
SEMA4D-204ENST00000420101 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
SEMA4D-204ENST00000420101 AGPAT4-IT1Q9H0P7 198 aa11.06□□□□□ -0.64
SEMA4D-204ENST00000420101 FAM240AA0A1B0GVK7 77 aa11.05□□□□□ -0.64
SEMA4D-204ENST00000420101 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.05□□□□□ -0.64
SEMA4D-204ENST00000420101 TIMM17AQ99595 171 aa11.05□□□□□ -0.64
SEMA4D-204ENST00000420101 DAZ1Q9NQZ3 744 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-204ENST00000420101 C11orf21Q9P2W6 132 aa11.05□□□□□ -0.64
SEMA4D-204ENST00000420101 TRAV26-2A0A0B4J265 109 aa11.05□□□□□ -0.64
SEMA4D-204ENST00000420101 ZNF469Q96JG9 3925 aaPredicted RBP11.05□□□□□ -0.64
SEMA4D-204ENST00000420101 TEX15Q9BXT5 2789 aa11.05□□□□□ -0.64
SEMA4D-204ENST00000420101 U3KQE9 123 aa11.05□□□□□ -0.64
SEMA4D-204ENST00000420101 FLNAP21333 2647 aaKnown RBP11.04□□□□□ -0.64
SEMA4D-204ENST00000420101 TRAV8-4A0A0B4J246 113 aa11.04□□□□□ -0.64
SEMA4D-204ENST00000420101 C9JAW5 83 aa11.04□□□□□ -0.64
SEMA4D-204ENST00000420101 RNASE1P07998 156 aaKnown RBP11.04□□□□□ -0.64
SEMA4D-204ENST00000420101 SPANXCQ9NY87 97 aa11.04□□□□□ -0.64
SEMA4D-204ENST00000420101 IGHV3-33P01772 117 aa11.03□□□□□ -0.64
SEMA4D-204ENST00000420101 GPHB5Q86YW7 130 aa11.03□□□□□ -0.64
SEMA4D-204ENST00000420101 RHPN1-AS1Q9BWJ2 59 aa11.03□□□□□ -0.64
SEMA4D-204ENST00000420101 MDFICQ9P1T7 246 aa11.03□□□□□ -0.64
SEMA4D-204ENST00000420101 IGKV3-7A0A075B6H7 116 aa11.02□□□□□ -0.64
SEMA4D-204ENST00000420101 IGLV4-69A0A075B6H9 119 aa11.02□□□□□ -0.64
SEMA4D-204ENST00000420101 IGHV4OR15-8A0A075B7B6 117 aa11.02□□□□□ -0.64
SEMA4D-204ENST00000420101 A0A087WW49 117 aa11.02□□□□□ -0.64
SEMA4D-204ENST00000420101 A0A0J9YX75 114 aa11.02□□□□□ -0.64
SEMA4D-204ENST00000420101 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.64
SEMA4D-204ENST00000420101 PRAC2D3DTV9 90 aa11.02□□□□□ -0.64
SEMA4D-204ENST00000420101 Q8N1Y9 231 aa11.02□□□□□ -0.64
SEMA4D-204ENST00000420101 C16orf92Q96LL3 132 aa11.02□□□□□ -0.64
SEMA4D-204ENST00000420101 TRBV30A0A0K0K1B3 111 aa11.02□□□□□ -0.65
SEMA4D-204ENST00000420101 INAFM1C9JVW0 142 aa11.02□□□□□ -0.65
SEMA4D-204ENST00000420101 CRYGDP07320 174 aa11.02□□□□□ -0.65
SEMA4D-204ENST00000420101 SYNJ2BPP57105 145 aa11.02□□□□□ -0.65
SEMA4D-204ENST00000420101 HILS1P60008 231 aa11.02□□□□□ -0.65
SEMA4D-204ENST00000420101 RNF182Q8N6D2 247 aa11.02□□□□□ -0.65
SEMA4D-204ENST00000420101 RNF152Q8N8N0 203 aa11.02□□□□□ -0.65
SEMA4D-204ENST00000420101 LINC00477Q96M19 166 aa11.02□□□□□ -0.65
SEMA4D-204ENST00000420101 KIR2DL4Q99706 377 aa11.02□□□□□ -0.65
SEMA4D-204ENST00000420101 ITPR2Q14571 2701 aa11.01□□□□□ -0.65
SEMA4D-204ENST00000420101 TRAV21A0A0B4J279 112 aa11.01□□□□□ -0.65
SEMA4D-204ENST00000420101 H3BT86 120 aa11.01□□□□□ -0.65
SEMA4D-204ENST00000420101 K7EMT4 169 aa11.01□□□□□ -0.65
SEMA4D-204ENST00000420101 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-204ENST00000420101 DEFB136Q30KP8 78 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms