RNA–Protein interactions for RNA: ENST00000419450.1

LINC01788-201, Transcript of long intergenic non-protein coding RNA 1788, humanhuman

TSL 1 (best) BASIC

Gene LINC01788, Length 2,086 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01788-201ENST00000419450 SMAD5-AS1Q9Y6J3 95 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 IGHV4OR15-8A0A075B7B6 117 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 A0A087WW49 117 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 IGHV3-72A0A0B4J1Y9 119 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 VCYO14598 125 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 RHOHQ15669 191 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 MIAQ16674 131 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 SEM1Q6ZVN7 128 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 TMEM61Q8N0U2 210 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 LITAFQ99732 161 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 LENEPQ9Y5L5 61 aa5.75□□□□□ -1.49
LINC01788-201ENST00000419450 REV3LO60673 3130 aa5.74□□□□□ -1.49
LINC01788-201ENST00000419450 MGPP08493 103 aa5.74□□□□□ -1.49
LINC01788-201ENST00000419450 CCL4P13236 92 aa5.74□□□□□ -1.49
LINC01788-201ENST00000419450 MSMPQ1L6U9 139 aa5.74□□□□□ -1.49
LINC01788-201ENST00000419450 C9orf47Q6ZRZ4 202 aa5.74□□□□□ -1.49
LINC01788-201ENST00000419450 SPRR3Q9UBC9 169 aa5.74□□□□□ -1.49
LINC01788-201ENST00000419450 LAMTOR3Q9UHA4 124 aa5.74□□□□□ -1.49
LINC01788-201ENST00000419450 MALRD1Q5VYJ5 2156 aa5.74□□□□□ -1.49
LINC01788-201ENST00000419450 PRAC2D3DTV9 90 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 PRSS2P07478 247 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 SNRPD3P62318 126 aaKnown RBP5.73□□□□□ -1.49
LINC01788-201ENST00000419450 SS18Q15532 418 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 Q6JHZ5 121 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 GPHB5Q86YW7 130 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 CNEP1R1Q8N9A8 125 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 PHLDA3Q9Y5J5 127 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 CACNA1EQ15878 2313 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 FAM186AA6NE01 2351 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 IGHV1-3A0A0C4DH29 117 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 C8orf87E5RJ46 101 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 COX7A2LO14548 114 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 TIMM17BO60830 172 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 IGHV1-46P01743 117 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 POLR2KP53803 58 aaKnown RBP5.73□□□□□ -1.49
LINC01788-201ENST00000419450 SYNJ2BPP57105 145 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 IGFL4Q6B9Z1 124 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 DEFB127Q9H1M4 99 aa5.73□□□□□ -1.49
LINC01788-201ENST00000419450 COL27A1Q8IZC6 1860 aaPredicted RBP5.72□□□□□ -1.49
LINC01788-201ENST00000419450 IGLV11-55A0A075B6I3 123 aa5.72□□□□□ -1.49
LINC01788-201ENST00000419450 PLAC8L1A1L4L8 177 aa5.72□□□□□ -1.49
LINC01788-201ENST00000419450 NDUFB3O43676 98 aa5.72□□□□□ -1.49
LINC01788-201ENST00000419450 IGHV1-8P0DP01 117 aa5.72□□□□□ -1.49
LINC01788-201ENST00000419450 S100A4P26447 101 aaKnown RBP5.72□□□□□ -1.49
LINC01788-201ENST00000419450 ABCA1O95477 2261 aa5.72□□□□□ -1.49
LINC01788-201ENST00000419450 CDH23Q9H251 3354 aa5.72□□□□□ -1.49
LINC01788-201ENST00000419450 NBEAQ8NFP9 2946 aa5.72□□□□□ -1.49
LINC01788-201ENST00000419450 SPEGQ15772 3267 aa5.72□□□□□ -1.49
LINC01788-201ENST00000419450 PRRC2AP48634 2157 aaKnown RBP5.72□□□□□ -1.49
LINC01788-201ENST00000419450 FRYQ5TBA9 3013 aa5.72□□□□□ -1.49
LINC01788-201ENST00000419450 TRBV7-6A0A0J9YX20 115 aa5.71□□□□□ -1.49
LINC01788-201ENST00000419450 RPL39P62891 51 aaKnown RBP5.71□□□□□ -1.49
LINC01788-201ENST00000419450 NSUN5P1Q3KNT7 163 aa5.71□□□□□ -1.49
LINC01788-201ENST00000419450 UNQ9165/PRO28630Q6UXU0 137 aa5.71□□□□□ -1.49
LINC01788-201ENST00000419450 SPATA3Q8NHX4 192 aa5.71□□□□□ -1.49
LINC01788-201ENST00000419450 SLC25A15Q9Y619 301 aa5.71□□□□□ -1.49
LINC01788-201ENST00000419450 CACNA1GO43497 2377 aa5.71□□□□□ -1.49
LINC01788-201ENST00000419450 ZNF318Q5VUA4 2279 aa5.71□□□□□ -1.5
LINC01788-201ENST00000419450 TRAV21A0A0B4J279 112 aa5.71□□□□□ -1.5
LINC01788-201ENST00000419450 TRBV27A0A0K0K1C4 114 aa5.71□□□□□ -1.5
LINC01788-201ENST00000419450 IGHG2P01859 326 aa5.71□□□□□ -1.5
LINC01788-201ENST00000419450 IGHV3-30-3P0DP02 117 aa5.71□□□□□ -1.5
LINC01788-201ENST00000419450 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.71□□□□□ -1.5
LINC01788-201ENST00000419450 VPS13AQ96RL7 3174 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 TRBV6-5A0A0K0K1A5 114 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 NXPH4O95158 308 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 COPS9Q8WXC6 57 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 TM2D3Q9BRN9 247 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 WDFY3Q8IZQ1 3526 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 IGHV3OR16-10A0A075B7F0 116 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 DNAL4O96015 105 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 IGLV1-47P01700 117 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 BAALC-AS2P0C853 105 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 BEAN1Q3B7T3 259 aa5.7□□□□□ -1.5
LINC01788-201ENST00000419450 IGHV3-64A0A075B6Q5 118 aa5.69□□□□□ -1.5
LINC01788-201ENST00000419450 IGHV1-58A0A0C4DH39 117 aa5.69□□□□□ -1.5
LINC01788-201ENST00000419450 BUB1B-PAK6H3BSN5 160 aa5.69□□□□□ -1.5
LINC01788-201ENST00000419450 NDUFA12Q9UI09 145 aa5.69□□□□□ -1.5
LINC01788-201ENST00000419450 CFAP54Q96N23 3096 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 M0R1W7 72 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 LCE2BO14633 110 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 MRPS36P82909 103 aaKnown RBP5.68□□□□□ -1.5
LINC01788-201ENST00000419450 ADAMTSL4-AS1Q5T5F5 129 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 C11orf68Q9H3H3 251 aaKnown RBP5.68□□□□□ -1.5
LINC01788-201ENST00000419450 S4R3C0 116 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 ARHGAP32A7KAX9 2087 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 NACAE9PAV3 2078 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 CTSGP08311 255 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 CFHR3Q02985 330 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 FHL2Q14192 279 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 C6orf223Q8N319 242 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 OVOL2Q9BRP0 275 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 TMEM243Q9BU79 118 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 KIF25-AS1Q9Y6Z4 181 aa5.68□□□□□ -1.5
LINC01788-201ENST00000419450 A0A0J9YXV3 536 aa5.67□□□□□ -1.5
LINC01788-201ENST00000419450 RNASE4P34096 147 aaKnown RBP5.67□□□□□ -1.5
LINC01788-201ENST00000419450 LINC00315P59091 139 aa5.67□□□□□ -1.5
LINC01788-201ENST00000419450 SUMO4Q6EEV6 95 aa5.67□□□□□ -1.5
LINC01788-201ENST00000419450 VSIG2Q96IQ7 327 aa5.67□□□□□ -1.5
LINC01788-201ENST00000419450 KAAG1Q9UBP8 84 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms