RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 C11orf44Q8N8P7 122 aa8.83□□□□□ -1
LIMK1-202ENST00000418310 Q9UF83 564 aa8.83□□□□□ -1
LIMK1-202ENST00000418310 IGHV3-16A0A0C4DH30 117 aa8.82□□□□□ -1
LIMK1-202ENST00000418310 PSMB8P28062 276 aa8.82□□□□□ -1
LIMK1-202ENST00000418310 POLR2KP53803 58 aaKnown RBP8.82□□□□□ -1
LIMK1-202ENST00000418310 HERVK_113P61574 105 aa8.82□□□□□ -1
LIMK1-202ENST00000418310 A0A0J9YX75 114 aa8.82□□□□□ -1
LIMK1-202ENST00000418310 IGIPA6NJ69 53 aa8.82□□□□□ -1
LIMK1-202ENST00000418310 RAX2Q96IS3 184 aa8.82□□□□□ -1
LIMK1-202ENST00000418310 CLUHP3Q96NS8 147 aa8.82□□□□□ -1
LIMK1-202ENST00000418310 SPANXB1Q9NS25 103 aaPredicted RBP8.82□□□□□ -1
LIMK1-202ENST00000418310 ACANP16112 2415 aa8.82□□□□□ -1
LIMK1-202ENST00000418310 H3BUA1 57 aa8.82□□□□□ -1
LIMK1-202ENST00000418310 SLURP1P55000 103 aa8.82□□□□□ -1
LIMK1-202ENST00000418310 SPAG8Q99932 426 aaPredicted RBP8.82□□□□□ -1
LIMK1-202ENST00000418310 TRAV2A0A0B4J234 112 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 TAL2Q16559 108 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 IGHV1OR15-1A0A075B7D0 117 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 A0A0J9YXV3 536 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 HOXD3P31249 432 aaPredicted RBP8.81□□□□□ -1
LIMK1-202ENST00000418310 DEFB131AP59861 70 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 NPC2P61916 151 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 TSPAN13O95857 204 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 PPP1R17O96001 155 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 SCGB1C2P0DMR2 95 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 LGALS3P17931 250 aaKnown RBP8.81□□□□□ -1
LIMK1-202ENST00000418310 AZU1P20160 251 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 ATP6V0BQ99437 205 aa8.81□□□□□ -1
LIMK1-202ENST00000418310 IGHV3-38A0A0C4DH36 116 aa8.8□□□□□ -1
LIMK1-202ENST00000418310 CFHR3Q02985 330 aa8.8□□□□□ -1
LIMK1-202ENST00000418310 IGHV3OR16-12A0A075B7B8 117 aa8.8□□□□□ -1
LIMK1-202ENST00000418310 A0A0J9YY99 117 aa8.8□□□□□ -1
LIMK1-202ENST00000418310 MED14OSP0DP75 135 aa8.8□□□□□ -1
LIMK1-202ENST00000418310 COX6B1P14854 86 aa8.8□□□□□ -1
LIMK1-202ENST00000418310 TCTEX1D4Q5JR98 221 aa8.8□□□□□ -1
LIMK1-202ENST00000418310 APRG1Q8IVJ8 170 aa8.8□□□□□ -1
LIMK1-202ENST00000418310 SYT8Q8NBV8 401 aa8.8□□□□□ -1
LIMK1-202ENST00000418310 M0QY20 66 aa8.79□□□□□ -1
LIMK1-202ENST00000418310 NDUFS8O00217 210 aa8.79□□□□□ -1
LIMK1-202ENST00000418310 RBMY1A1P0DJD3 496 aaKnown RBP8.79□□□□□ -1
LIMK1-202ENST00000418310 RBMY1CP0DJD4 496 aa8.79□□□□□ -1
LIMK1-202ENST00000418310 RBMY1FQ15415 496 aaKnown RBP8.79□□□□□ -1
LIMK1-202ENST00000418310 SPXQ9BT56 116 aa8.79□□□□□ -1
LIMK1-202ENST00000418310 J3QQQ9 107 aa8.79□□□□□ -1
LIMK1-202ENST00000418310 SAMD13Q5VXD3 122 aa8.79□□□□□ -1
LIMK1-202ENST00000418310 TMEM238LA0A1B0GVL6 79 aa8.79□□□□□ -1
LIMK1-202ENST00000418310 A6NJY4 79 aa8.79□□□□□ -1
LIMK1-202ENST00000418310 F8W1H4 67 aa8.79□□□□□ -1
LIMK1-202ENST00000418310 K7EQG2 157 aa8.79□□□□□ -1
LIMK1-202ENST00000418310 A8MZ25 164 aa8.78□□□□□ -1
LIMK1-202ENST00000418310 GAGE12HA6NDE8 117 aa8.78□□□□□ -1
LIMK1-202ENST00000418310 K7EMT4 169 aa8.78□□□□□ -1
LIMK1-202ENST00000418310 NXPH4O95158 308 aa8.78□□□□□ -1
LIMK1-202ENST00000418310 TRAV8-3A0A0A6YYJ7 113 aa8.77□□□□□ -1.01
LIMK1-202ENST00000418310 Q1RN00 199 aa8.77□□□□□ -1.01
LIMK1-202ENST00000418310 PRSS2P07478 247 aa8.77□□□□□ -1.01
LIMK1-202ENST00000418310 C9orf85Q96MD7 179 aa8.77□□□□□ -1.01
LIMK1-202ENST00000418310 VCX2Q9H322 139 aa8.77□□□□□ -1.01
LIMK1-202ENST00000418310 USP24Q9UPU5 2620 aa8.77□□□□□ -1.01
LIMK1-202ENST00000418310 TRBV27A0A0K0K1C4 114 aa8.76□□□□□ -1.01
LIMK1-202ENST00000418310 LGALS9O00182 355 aa8.76□□□□□ -1.01
LIMK1-202ENST00000418310 CD28P10747 220 aa8.76□□□□□ -1.01
LIMK1-202ENST00000418310 DLX4Q92988 240 aaPredicted RBP8.76□□□□□ -1.01
LIMK1-202ENST00000418310 J3QR89 54 aa8.76□□□□□ -1.01
LIMK1-202ENST00000418310 NDUFA11Q86Y39 141 aa8.76□□□□□ -1.01
LIMK1-202ENST00000418310 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.76□□□□□ -1.01
LIMK1-202ENST00000418310 A0A1W2PRX2 142 aa8.76□□□□□ -1.01
LIMK1-202ENST00000418310 IGKV2-29A2NJV5 120 aaPredicted RBP8.76□□□□□ -1.01
LIMK1-202ENST00000418310 CFC1BP0CG36 223 aa8.76□□□□□ -1.01
LIMK1-202ENST00000418310 CFC1P0CG37 223 aa8.76□□□□□ -1.01
LIMK1-202ENST00000418310 SMCPP49901 116 aaPredicted RBP8.76□□□□□ -1.01
LIMK1-202ENST00000418310 TRPT1Q86TN4 253 aaKnown RBP8.76□□□□□ -1.01
LIMK1-202ENST00000418310 LINC01356Q8N9X3 169 aa8.76□□□□□ -1.01
LIMK1-202ENST00000418310 PRO0461Q9UI25 63 aa8.76□□□□□ -1.01
LIMK1-202ENST00000418310 FN1P02751 2386 aaKnown RBP8.75□□□□□ -1.01
LIMK1-202ENST00000418310 A4D1N5 150 aa8.75□□□□□ -1.01
LIMK1-202ENST00000418310 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
LIMK1-202ENST00000418310 TIMM17AQ99595 171 aa8.75□□□□□ -1.01
LIMK1-202ENST00000418310 SIGMAR1Q99720 223 aa8.75□□□□□ -1.01
LIMK1-202ENST00000418310 TCL1BO95988 128 aa8.75□□□□□ -1.01
LIMK1-202ENST00000418310 KRTAP10-9P60411 292 aa8.75□□□□□ -1.01
LIMK1-202ENST00000418310 UBE2D1P51668 147 aa8.75□□□□□ -1.01
LIMK1-202ENST00000418310 A0A0U1RRA0 63 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 IGHV3-30P01768 117 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 IGHV3-30-5P0DP03 117 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 PAPPA-AS1Q5QFB9 102 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 C20orf203Q8NBC4 194 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 TRBV7-9A0A0J9YWB2 115 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 I3L3M4 83 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 ZNF22P17026 224 aaPredicted RBP8.74□□□□□ -1.01
LIMK1-202ENST00000418310 Q6ZSN1 163 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 NFE4Q86UQ8 179 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 TMEM61Q8N0U2 210 aa8.74□□□□□ -1.01
LIMK1-202ENST00000418310 VPREB3Q9UKI3 123 aa8.73□□□□□ -1.01
LIMK1-202ENST00000418310 FLNAP21333 2647 aaKnown RBP8.73□□□□□ -1.01
LIMK1-202ENST00000418310 MUSTN1Q8IVN3 82 aa8.73□□□□□ -1.01
LIMK1-202ENST00000418310 SVIPQ8NHG7 77 aa8.73□□□□□ -1.01
LIMK1-202ENST00000418310 TNFRSF18Q9Y5U5 241 aa8.73□□□□□ -1.01
LIMK1-202ENST00000418310 RBMY1BA6NDE4 496 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms