RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 RS1O15537 224 aa13.88□□□□□ -0.19
RAB3IP-205ENST00000417413 ATP5LO75964 103 aa13.88□□□□□ -0.19
RAB3IP-205ENST00000417413 IGLC3P0DOY3 106 aa13.88□□□□□ -0.19
RAB3IP-205ENST00000417413 DEFA6Q01524 100 aa13.88□□□□□ -0.19
RAB3IP-205ENST00000417413 TOMM6Q96B49 74 aa13.88□□□□□ -0.19
RAB3IP-205ENST00000417413 hDV102S1A0JD36 115 aa13.87□□□□□ -0.19
RAB3IP-205ENST00000417413 TMEM263Q8WUH6 116 aaKnown RBP13.87□□□□□ -0.19
RAB3IP-205ENST00000417413 IGHV3-73A0A0B4J1V6 119 aa13.86□□□□□ -0.19
RAB3IP-205ENST00000417413 GTSCR1Q86UQ5 136 aa13.86□□□□□ -0.19
RAB3IP-205ENST00000417413 H7C1H1 209 aa13.85□□□□□ -0.19
RAB3IP-205ENST00000417413 ZFP2Q6ZN57 461 aa13.85□□□□□ -0.19
RAB3IP-205ENST00000417413 Q6ZSN1 163 aa13.85□□□□□ -0.19
RAB3IP-205ENST00000417413 PLAC8L1A1L4L8 177 aa13.84□□□□□ -0.19
RAB3IP-205ENST00000417413 RHODO00212 210 aa13.84□□□□□ -0.19
RAB3IP-205ENST00000417413 ODF1Q14990 250 aa13.84□□□□□ -0.19
RAB3IP-205ENST00000417413 C2orf66Q6UXQ4 117 aa13.84□□□□□ -0.19
RAB3IP-205ENST00000417413 DKK2Q9UBU2 259 aa13.84□□□□□ -0.19
RAB3IP-205ENST00000417413 TENM1Q9UKZ4 2725 aa13.83□□□□□ -0.2
RAB3IP-205ENST00000417413 PRSS1P07477 247 aa13.83□□□□□ -0.2
RAB3IP-205ENST00000417413 KIR2DL4Q99706 377 aa13.83□□□□□ -0.2
RAB3IP-205ENST00000417413 UQCR10Q9UDW1 63 aa13.83□□□□□ -0.2
RAB3IP-205ENST00000417413 P0DMU3 169 aa13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 FAM231AP0DMU4 169 aa13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 FAM231CP0DMU5 169 aa13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 SCGB3A1Q96QR1 104 aa13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 ZMAT4Q9H898 229 aa13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 HSBP1L1C9JCN9 74 aa13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 RIPPLY3P57055 190 aa13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 DAZ2Q13117 558 aaKnown RBP13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 DEFB104AQ8WTQ1 72 aa13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 C16orf74Q96GX8 76 aa13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 ZMAT5Q9UDW3 170 aaKnown RBP13.82□□□□□ -0.2
RAB3IP-205ENST00000417413 TRGV1A0A0A0MS02 117 aa13.81□□□□□ -0.2
RAB3IP-205ENST00000417413 WIPF1O43516 503 aa13.81□□□□□ -0.2
RAB3IP-205ENST00000417413 IGHV3-53P01767 116 aa13.81□□□□□ -0.2
RAB3IP-205ENST00000417413 TSHBP01222 138 aa13.8□□□□□ -0.2
RAB3IP-205ENST00000417413 G0S2P27469 103 aa13.8□□□□□ -0.2
RAB3IP-205ENST00000417413 Q6ZTI0 123 aa13.8□□□□□ -0.2
RAB3IP-205ENST00000417413 Q9UF83 564 aa13.8□□□□□ -0.2
RAB3IP-205ENST00000417413 I3L3M4 83 aa13.79□□□□□ -0.2
RAB3IP-205ENST00000417413 RRN3P1Q2M238 152 aa13.79□□□□□ -0.2
RAB3IP-205ENST00000417413 ERASQ7Z444 233 aa13.79□□□□□ -0.2
RAB3IP-205ENST00000417413 NOP10Q9NPE3 64 aaKnown RBP13.79□□□□□ -0.2
RAB3IP-205ENST00000417413 CYSLTR1Q9Y271 337 aa13.79□□□□□ -0.2
RAB3IP-205ENST00000417413 TRAV12-1A0A0B4J245 112 aa13.79□□□□□ -0.2
RAB3IP-205ENST00000417413 LINC01549A6NIU2 74 aa13.79□□□□□ -0.2
RAB3IP-205ENST00000417413 RHOHQ15669 191 aa13.79□□□□□ -0.2
RAB3IP-205ENST00000417413 OVOL2Q9BRP0 275 aa13.79□□□□□ -0.2
RAB3IP-205ENST00000417413 A0A087WX48 190 aa13.78□□□□□ -0.2
RAB3IP-205ENST00000417413 Q6ZN92 141 aa13.78□□□□□ -0.2
RAB3IP-205ENST00000417413 NEXN-AS1Q8NBZ9 246 aa13.78□□□□□ -0.2
RAB3IP-205ENST00000417413 OR4C5Q8NGB2 326 aa13.78□□□□□ -0.2
RAB3IP-205ENST00000417413 TP53TG1Q9Y2A0 90 aa13.78□□□□□ -0.2
RAB3IP-205ENST00000417413 FBN1P35555 2871 aaKnown RBP13.77□□□□□ -0.2
RAB3IP-205ENST00000417413 IGIPA6NJ69 53 aa13.77□□□□□ -0.21
RAB3IP-205ENST00000417413 ANKRD39Q53RE8 183 aa13.77□□□□□ -0.21
RAB3IP-205ENST00000417413 ZNF479Q96JC4 524 aa13.77□□□□□ -0.21
RAB3IP-205ENST00000417413 TNFRSF18Q9Y5U5 241 aa13.77□□□□□ -0.21
RAB3IP-205ENST00000417413 VWFP04275 2813 aa13.77□□□□□ -0.21
RAB3IP-205ENST00000417413 TRAV4A0A0B4J268 109 aa13.76□□□□□ -0.21
RAB3IP-205ENST00000417413 RPL39P62891 51 aaKnown RBP13.76□□□□□ -0.21
RAB3IP-205ENST00000417413 STPG4Q8N801 248 aa13.76□□□□□ -0.21
RAB3IP-205ENST00000417413 DNAJC30Q96LL9 226 aa13.76□□□□□ -0.21
RAB3IP-205ENST00000417413 LURAP1LQ8IV03 231 aa13.75□□□□□ -0.21
RAB3IP-205ENST00000417413 BAALCQ8WXS3 180 aa13.75□□□□□ -0.21
RAB3IP-205ENST00000417413 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
RAB3IP-205ENST00000417413 HHLA3Q9XRX5 114 aa13.75□□□□□ -0.21
RAB3IP-205ENST00000417413 DPM2O94777 84 aa13.75□□□□□ -0.21
RAB3IP-205ENST00000417413 IGKCP01834 107 aa13.75□□□□□ -0.21
RAB3IP-205ENST00000417413 CTAG1AP78358 180 aa13.75□□□□□ -0.21
RAB3IP-205ENST00000417413 HNRNPA3P51991 378 aaKnown RBP13.74□□□□□ -0.21
RAB3IP-205ENST00000417413 SNHG12Q9BXW3 62 aa13.74□□□□□ -0.21
RAB3IP-205ENST00000417413 COL6A5A8TX70 2615 aa13.73□□□□□ -0.21
RAB3IP-205ENST00000417413 EREGO14944 169 aa13.73□□□□□ -0.21
RAB3IP-205ENST00000417413 MRPL52Q86TS9 123 aaKnown RBP13.73□□□□□ -0.21
RAB3IP-205ENST00000417413 C20orf203Q8NBC4 194 aa13.73□□□□□ -0.21
RAB3IP-205ENST00000417413 TIMM17AQ99595 171 aa13.73□□□□□ -0.21
RAB3IP-205ENST00000417413 TP73-AS1Q9UF72 201 aa13.73□□□□□ -0.21
RAB3IP-205ENST00000417413 COX8AP10176 69 aa13.72□□□□□ -0.21
RAB3IP-205ENST00000417413 TMEM141Q96I45 108 aa13.72□□□□□ -0.21
RAB3IP-205ENST00000417413 X6R8D5 127 aa13.72□□□□□ -0.21
RAB3IP-205ENST00000417413 F8VRH5 84 aa13.72□□□□□ -0.21
RAB3IP-205ENST00000417413 SLC25A34Q6PIV7 304 aa13.72□□□□□ -0.21
RAB3IP-205ENST00000417413 KIR2DL5BQ8NHK3 375 aa13.72□□□□□ -0.21
RAB3IP-205ENST00000417413 MRPS16Q9Y3D3 137 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-205ENST00000417413 CHTOPQ9Y3Y2 248 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-205ENST00000417413 NOTCH3Q9UM47 2321 aa13.71□□□□□ -0.21
RAB3IP-205ENST00000417413 GAGE12BA1L429 117 aa13.71□□□□□ -0.22
RAB3IP-205ENST00000417413 PRSS29PA6NIE9 313 aa13.71□□□□□ -0.22
RAB3IP-205ENST00000417413 M0R143 59 aa13.71□□□□□ -0.22
RAB3IP-205ENST00000417413 GAGE7O76087 117 aa13.71□□□□□ -0.22
RAB3IP-205ENST00000417413 GAGE12FP0CL80 117 aa13.71□□□□□ -0.22
RAB3IP-205ENST00000417413 GAGE12GP0CL81 117 aa13.71□□□□□ -0.22
RAB3IP-205ENST00000417413 GAGE12IP0CL82 117 aa13.71□□□□□ -0.22
RAB3IP-205ENST00000417413 PLNP26678 52 aa13.7□□□□□ -0.22
RAB3IP-205ENST00000417413 MDFIQ99750 246 aa13.7□□□□□ -0.22
RAB3IP-205ENST00000417413 SMIM9A6NGZ8 99 aa13.69□□□□□ -0.22
RAB3IP-205ENST00000417413 FGF6P10767 208 aa13.69□□□□□ -0.22
RAB3IP-205ENST00000417413 K7EQD1 137 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms