RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 CIDEAO60543 219 aa5.75□□□□□ -1.49
AP001042.1-201ENST00000416842 HTN1P15515 57 aa5.75□□□□□ -1.49
AP001042.1-201ENST00000416842 POLR2KP53803 58 aaKnown RBP5.75□□□□□ -1.49
AP001042.1-201ENST00000416842 IQCJQ1A5X6 159 aa5.75□□□□□ -1.49
AP001042.1-201ENST00000416842 RRN3P1Q2M238 152 aa5.75□□□□□ -1.49
AP001042.1-201ENST00000416842 Q6ZSN1 163 aa5.75□□□□□ -1.49
AP001042.1-201ENST00000416842 BAGE3Q86Y29 109 aa5.75□□□□□ -1.49
AP001042.1-201ENST00000416842 CHCHD1Q96BP2 118 aaKnown RBP5.75□□□□□ -1.49
AP001042.1-201ENST00000416842 TMEM208Q9BTX3 173 aa5.75□□□□□ -1.49
AP001042.1-201ENST00000416842 TP53TG1Q9Y2A0 90 aa5.75□□□□□ -1.49
AP001042.1-201ENST00000416842 PPP1R17O96001 155 aa5.74□□□□□ -1.49
AP001042.1-201ENST00000416842 SUMO4Q6EEV6 95 aa5.74□□□□□ -1.49
AP001042.1-201ENST00000416842 Q8N8P6 123 aa5.74□□□□□ -1.49
AP001042.1-201ENST00000416842 IGHV3OR16-12A0A075B7B8 117 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 A0A087WWL8 130 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 TRAV26-2A0A0B4J265 109 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 TRAV4A0A0B4J268 109 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 RHODO00212 210 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 NCR2O95944 276 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 IGHV3-53P01767 116 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 PMCHP20382 165 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 IFI27P40305 119 aaPredicted RBP5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 Q6ZTI0 123 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 Q8N3U1 123 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 Q8NAQ8 132 aa5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 NOP10Q9NPE3 64 aaKnown RBP5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 NXT2Q9NPJ8 142 aaKnown RBP5.73□□□□□ -1.49
AP001042.1-201ENST00000416842 FRAS1Q86XX4 4008 aa5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 A0A096LNJ9 63 aa5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 TRBV27A0A0K0K1C4 114 aa5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 K7EMI3 77 aa5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 SMIM17P0DL12 118 aa5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 MIFP14174 115 aa5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 OR11H2Q8NH07 326 aa5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 RPL39LQ96EH5 51 aaKnown RBP5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 ZMAT4Q9H898 229 aa5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 NIT2Q9NQR4 276 aa5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 MRPL16Q9NX20 251 aaKnown RBP5.72□□□□□ -1.49
AP001042.1-201ENST00000416842 TRGV1A0A0A0MS02 117 aa5.71□□□□□ -1.5
AP001042.1-201ENST00000416842 LYRM9A8MSI8 78 aa5.71□□□□□ -1.5
AP001042.1-201ENST00000416842 SUMO2P61956 95 aaKnown RBP5.71□□□□□ -1.5
AP001042.1-201ENST00000416842 DEFB135Q30KP9 77 aa5.71□□□□□ -1.5
AP001042.1-201ENST00000416842 PRSS3P2Q8NHM4 247 aa5.71□□□□□ -1.5
AP001042.1-201ENST00000416842 TMEM18Q96B42 140 aa5.71□□□□□ -1.5
AP001042.1-201ENST00000416842 ZNF479Q96JC4 524 aa5.71□□□□□ -1.5
AP001042.1-201ENST00000416842 MAP1LC3AQ9H492 121 aa5.71□□□□□ -1.5
AP001042.1-201ENST00000416842 Q9UF83 564 aa5.71□□□□□ -1.5
AP001042.1-201ENST00000416842 NACAE9PAV3 2078 aa5.71□□□□□ -1.5
AP001042.1-201ENST00000416842 ALMS1Q8TCU4 4167 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 VCYO14598 125 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 MGPP08493 103 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 FABP4P15090 132 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 FHL2Q14192 279 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 PDZD11Q5EBL8 140 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 FAM19A2Q8N3H0 131 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 OR4C5Q8NGB2 326 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 DNAJC30Q96LL9 226 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 TM2D3Q9BRN9 247 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 TMEM70Q9BUB7 260 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 SMIM2Q9BVW6 85 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 ST20Q9HBF5 79 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 AP5S1Q9NUS5 200 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 DKK2Q9UBU2 259 aa5.7□□□□□ -1.5
AP001042.1-201ENST00000416842 IGHV1-24A0A0C4DH33 117 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 IGHV4-28A0A0C4DH34 117 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 TRBV10-1A0A0K0K1A3 114 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 LOC389332A0A1B0GUA5 103 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 F5H697 171 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 H7C1H1 209 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 HSBP1O75506 76 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 FCER1GP30273 86 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 RNASEKQ6P5S7 137 aaKnown RBP5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 FA2HQ7L5A8 372 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 SPATA12Q7Z6I5 190 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 NEXN-AS1Q8NBZ9 246 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 OR10D4PQ8NGN7 298 aa5.69□□□□□ -1.5
AP001042.1-201ENST00000416842 RYR1P21817 5038 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 TRBV6-4A0A1B0GX49 114 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 GAGE12BA1L429 117 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 SDHAF1A6NFY7 115 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 GAGE7O76087 117 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 GAGE12FP0CL80 117 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 GAGE12GP0CL81 117 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 GAGE12IP0CL82 117 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 LINC00694P0DN24 101 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 S100A2P29034 98 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 AMTP48728 403 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 LAGE3Q14657 143 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 JOSD1Q15040 202 aaPredicted RBP5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 PYY3Q5JQD4 70 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 FAM74A4Q5TZK3 123 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 FAM222AQ5U5X8 452 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 Q8N976 141 aa5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 C11orf68Q9H3H3 251 aaKnown RBP5.68□□□□□ -1.5
AP001042.1-201ENST00000416842 IGHV3-73A0A0B4J1V6 119 aa5.67□□□□□ -1.5
AP001042.1-201ENST00000416842 TSHBP01222 138 aa5.67□□□□□ -1.5
AP001042.1-201ENST00000416842 P0DMU3 169 aa5.67□□□□□ -1.5
AP001042.1-201ENST00000416842 FAM231AP0DMU4 169 aa5.67□□□□□ -1.5
AP001042.1-201ENST00000416842 FAM231CP0DMU5 169 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms