RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 hADV29S1A0JD25 119 aa9.95□□□□□ -0.82
SCN1B-202ENST00000415950 APRG1Q8IVJ8 170 aa9.95□□□□□ -0.82
SCN1B-202ENST00000415950 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
SCN1B-202ENST00000415950 G3V4G9 280 aa9.95□□□□□ -0.82
SCN1B-202ENST00000415950 CRIP1P50238 77 aa9.95□□□□□ -0.82
SCN1B-202ENST00000415950 GAS8-AS1O95177 125 aa9.95□□□□□ -0.82
SCN1B-202ENST00000415950 IGHV4-59P01825 116 aa9.95□□□□□ -0.82
SCN1B-202ENST00000415950 IGHV7-81A0A0B4J1V7 117 aa9.95□□□□□ -0.82
SCN1B-202ENST00000415950 IGLV1-47P01700 117 aa9.95□□□□□ -0.82
SCN1B-202ENST00000415950 IGLV10-54A0A075B6I4 117 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 K7ENP7 123 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 RBMY1FQ15415 496 aaKnown RBP9.94□□□□□ -0.82
SCN1B-202ENST00000415950 Q6ZQT7 251 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 TEN1Q86WV5 123 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 ZFP2Q6ZN57 461 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 DEFB105AQ8NG35 78 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 OPRPNQ99935 248 aaPredicted RBP9.94□□□□□ -0.82
SCN1B-202ENST00000415950 ESM1Q9NQ30 184 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 SPANXA1Q9NS26 97 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 TRAV26-1A0A087WT03 109 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 BUB3O43684 328 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 PLA2G2CQ5R387 149 aa9.94□□□□□ -0.82
SCN1B-202ENST00000415950 PRRC2AP48634 2157 aaKnown RBP9.93□□□□□ -0.82
SCN1B-202ENST00000415950 TRAV4A0A0B4J268 109 aa9.93□□□□□ -0.82
SCN1B-202ENST00000415950 LINC01620Q4KN68 170 aa9.93□□□□□ -0.82
SCN1B-202ENST00000415950 ATG2AQ2TAZ0 1938 aa9.93□□□□□ -0.82
SCN1B-202ENST00000415950 IGLV11-55A0A075B6I3 123 aa9.93□□□□□ -0.82
SCN1B-202ENST00000415950 FANCD2OSQ96PS1 177 aa9.93□□□□□ -0.82
SCN1B-202ENST00000415950 SP5Q6BEB4 398 aaPredicted RBP9.92□□□□□ -0.82
SCN1B-202ENST00000415950 IGFL3Q6UXB1 125 aa9.92□□□□□ -0.82
SCN1B-202ENST00000415950 FAM236AA0A1B0GUQ0 79 aa9.92□□□□□ -0.82
SCN1B-202ENST00000415950 FAM236BA0A1B0GV22 79 aa9.92□□□□□ -0.82
SCN1B-202ENST00000415950 ACANP16112 2415 aa9.92□□□□□ -0.82
SCN1B-202ENST00000415950 TRANK1O15050 2925 aa9.92□□□□□ -0.82
SCN1B-202ENST00000415950 LINC01548A6NM66 108 aa9.92□□□□□ -0.82
SCN1B-202ENST00000415950 IGF1P05019 195 aa9.92□□□□□ -0.82
SCN1B-202ENST00000415950 AJUBAQ96IF1 538 aa9.92□□□□□ -0.82
SCN1B-202ENST00000415950 CENPVL3A0A0U1RRI6 287 aa9.92□□□□□ -0.82
SCN1B-202ENST00000415950 DEFB112Q30KQ8 113 aa9.91□□□□□ -0.82
SCN1B-202ENST00000415950 MAPKAPK5-AS1Q8N8E1 139 aa9.91□□□□□ -0.82
SCN1B-202ENST00000415950 URB1-AS1Q96HZ7 61 aa9.91□□□□□ -0.82
SCN1B-202ENST00000415950 Q96MF0 132 aa9.91□□□□□ -0.82
SCN1B-202ENST00000415950 C11orf86A6NJI1 115 aa9.91□□□□□ -0.82
SCN1B-202ENST00000415950 RHOHQ15669 191 aa9.91□□□□□ -0.82
SCN1B-202ENST00000415950 IGHV4-28A0A0C4DH34 117 aa9.91□□□□□ -0.82
SCN1B-202ENST00000415950 MRPL23Q16540 153 aaKnown RBP9.91□□□□□ -0.82
SCN1B-202ENST00000415950 HOXB4P17483 251 aaPredicted RBP9.9□□□□□ -0.82
SCN1B-202ENST00000415950 FOXI1Q12951 378 aa9.9□□□□□ -0.82
SCN1B-202ENST00000415950 C2orf91Q6ZV80 131 aa9.9□□□□□ -0.82
SCN1B-202ENST00000415950 CLEC2BQ92478 149 aa9.9□□□□□ -0.82
SCN1B-202ENST00000415950 SND1-IT1Q9HBX3 110 aa9.9□□□□□ -0.82
SCN1B-202ENST00000415950 NBL1P41271 181 aa9.9□□□□□ -0.83
SCN1B-202ENST00000415950 PTPRSQ13332 1948 aa9.89□□□□□ -0.83
SCN1B-202ENST00000415950 A0A1B0GX51 115 aa9.89□□□□□ -0.83
SCN1B-202ENST00000415950 HIST2H2BCQ6DN03 193 aa9.89□□□□□ -0.83
SCN1B-202ENST00000415950 SLC25A29Q8N8R3 303 aa9.89□□□□□ -0.83
SCN1B-202ENST00000415950 LENEPQ9Y5L5 61 aa9.89□□□□□ -0.83
SCN1B-202ENST00000415950 SLURP1P55000 103 aa9.89□□□□□ -0.83
SCN1B-202ENST00000415950 Q9HAA7 133 aa9.89□□□□□ -0.83
SCN1B-202ENST00000415950 GATA3P23771 443 aa9.88□□□□□ -0.83
SCN1B-202ENST00000415950 ICOSQ9Y6W8 199 aa9.88□□□□□ -0.83
SCN1B-202ENST00000415950 IGHV4-38-2P0DP08 117 aa9.88□□□□□ -0.83
SCN1B-202ENST00000415950 SZT2Q5T011 3432 aa9.88□□□□□ -0.83
SCN1B-202ENST00000415950 Q8N1Y9 231 aa9.88□□□□□ -0.83
SCN1B-202ENST00000415950 TRBV12-3P01733 135 aa9.88□□□□□ -0.83
SCN1B-202ENST00000415950 BAALCQ8WXS3 180 aa9.88□□□□□ -0.83
SCN1B-202ENST00000415950 C1orf43Q9BWL3 253 aa9.88□□□□□ -0.83
SCN1B-202ENST00000415950 ORMDL1Q9P0S3 153 aa9.88□□□□□ -0.83
SCN1B-202ENST00000415950 IGHV4-61A0A0C4DH41 118 aa9.87□□□□□ -0.83
SCN1B-202ENST00000415950 INSL3P51460 131 aa9.87□□□□□ -0.83
SCN1B-202ENST00000415950 Q8N9W7 124 aa9.87□□□□□ -0.83
SCN1B-202ENST00000415950 UNQ9165/PRO28630Q6UXU0 137 aa9.87□□□□□ -0.83
SCN1B-202ENST00000415950 ELANEP08246 267 aa9.87□□□□□ -0.83
SCN1B-202ENST00000415950 CEMP1Q6PRD7 247 aaPredicted RBP9.87□□□□□ -0.83
SCN1B-202ENST00000415950 MGAQ8IWI9 3026 aa9.87□□□□□ -0.83
SCN1B-202ENST00000415950 DSPP15924 2871 aaKnown RBP9.87□□□□□ -0.83
SCN1B-202ENST00000415950 WI2-2373I1.2A0A1W2PRP0 233 aa9.86□□□□□ -0.83
SCN1B-202ENST00000415950 MUC22E2RYF6 1773 aaPredicted RBP9.86□□□□□ -0.83
SCN1B-202ENST00000415950 ZFP36P26651 326 aaKnown RBP9.86□□□□□ -0.83
SCN1B-202ENST00000415950 COX7B2Q8TF08 81 aa9.86□□□□□ -0.83
SCN1B-202ENST00000415950 C5orf47Q569G3 176 aa9.86□□□□□ -0.83
SCN1B-202ENST00000415950 TET2Q6N021 2002 aaPredicted RBP9.86□□□□□ -0.83
SCN1B-202ENST00000415950 IGKV2D-24A0A075B6R9 120 aa9.85□□□□□ -0.83
SCN1B-202ENST00000415950 IGFL2Q6UWQ7 119 aa9.85□□□□□ -0.83
SCN1B-202ENST00000415950 C8orf31Q8N9H6 132 aa9.85□□□□□ -0.83
SCN1B-202ENST00000415950 LECT2O14960 151 aa9.85□□□□□ -0.83
SCN1B-202ENST00000415950 IGLV2-11P01706 119 aa9.85□□□□□ -0.83
SCN1B-202ENST00000415950 HIGD1BQ9P298 99 aa9.85□□□□□ -0.83
SCN1B-202ENST00000415950 E9PLD3 99 aa9.85□□□□□ -0.83
SCN1B-202ENST00000415950 MT-ATP8P03928 68 aa9.85□□□□□ -0.83
SCN1B-202ENST00000415950 MYCNOSP40205 109 aa9.84□□□□□ -0.83
SCN1B-202ENST00000415950 SRSF2Q01130 221 aaKnown RBP9.84□□□□□ -0.83
SCN1B-202ENST00000415950 MDFICQ9P1T7 246 aa9.84□□□□□ -0.83
SCN1B-202ENST00000415950 NRGNQ92686 78 aa9.83□□□□□ -0.84
SCN1B-202ENST00000415950 GYPEP15421 78 aa9.83□□□□□ -0.84
SCN1B-202ENST00000415950 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
SCN1B-202ENST00000415950 FRYQ5TBA9 3013 aa9.82□□□□□ -0.84
SCN1B-202ENST00000415950 LGALS9O00182 355 aa9.82□□□□□ -0.84
SCN1B-202ENST00000415950 IGHV4-30-2A0A087WSY4 118 aa9.81□□□□□ -0.84
SCN1B-202ENST00000415950 CCL24O00175 119 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms