RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SFRP2Q96HF1 295 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 IMMP2LQ96T52 175 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 RNASE7Q9H1E1 156 aaKnown RBP1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 BIN3Q9NQY0 253 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 OSTCQ9NRP0 149 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 IL36BQ9NZH7 164 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 ZNF492Q9P255 531 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 PDZD2O15018 2839 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 ABCA1O95477 2261 aa1.68□□□□□ -2.14
HMGB1P11-201ENST00000413899 ACACBO00763 2458 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 FLNCQ14315 2725 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 TRAV9-1A0A075B6T8 112 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 IGKV2-40A0A087WW87 121 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 OR2T8A6NH00 312 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 PPP5D1E7EU14 171 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 H3BUX3 64 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 TGOLN2O43493 480 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 HYPMO75409 117 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 IGKV2D-40P01614 121 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 IGHG2P01859 326 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 SLC25A5P05141 298 aaKnown RBP1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 NBEAP1P0C6P0 100 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H1EP10412 219 aaKnown RBP1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 ESDP10768 282 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H1BP16401 226 aaKnown RBP1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 ORM2P19652 201 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 GNG4P50150 75 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 CRIP1P50238 77 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 ZNF80P51504 273 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 TAS2R60P59551 318 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 KRTAP12-3P60328 96 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 RAB5BP61020 215 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 RHOGP84095 191 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 RPL19P84098 196 aaKnown RBP1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 RAB31Q13636 194 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 HES1Q14469 280 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 DEFB112Q30KQ8 113 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 UNQ5815/PRO19632Q6UWF5 114 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 TOMM20LQ6UXN7 152 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 OR8I2Q8N0Y5 310 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 LINC00469Q8N7U9 141 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 TMEM75Q8N9X5 138 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 Q8TAT8 98 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 SMIM12Q96EX1 92 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H2BLQ99880 126 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 TCEAL7Q9BRU2 100 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 SND1-IT1Q9HBX3 110 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 OTORQ9NRC9 128 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 EPDR1Q9UM22 224 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIGD1AQ9Y241 93 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 R4GN34 69 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 MED13LQ71F56 2210 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 ZFYVE26Q68DK2 2539 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 ZNF462Q96JM2 2506 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 CSMD1Q96PZ7 3565 aa1.67□□□□□ -2.14
HMGB1P11-201ENST00000413899 CELSR1Q9NYQ6 3014 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 DOPEY2Q9Y3R5 2298 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 USP9YO00507 2555 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 UTP20O75691 2785 aaKnown RBP1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 TENM4Q6N022 2769 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 CSMD2Q7Z408 3487 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 CACNA1BQ00975 2339 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 TRAV41A0A0B4J266 112 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 GRIFINA4D1Z8 144 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 IZUMO1RA6ND01 250 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 PGPA6NDG6 321 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 FAM223BA6NKX1 122 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 LINC00587B1AMM8 73 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 GNG7O60262 68 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 S100A8P05109 93 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 IGLC6P0CF74 106 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 RD3LP0DJH9 198 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 GZMBP10144 247 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 SLC25A16P16260 332 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 PSMB8P28062 276 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 TCL1AP56279 114 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 NDUFA6P56556 154 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 DEFB1P60022 68 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 RAB4BP61018 213 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 RANP62826 216 aaKnown RBP1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 BLCAPP62952 87 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 CTAG1AP78358 180 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 SLC35B1P78383 322 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 PDE6HQ13956 83 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 PLGLAQ15195 96 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 PSG3Q16557 428 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 DEFB113Q30KQ7 82 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 PDZD11Q5EBL8 140 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 IBA57Q5T440 356 aaKnown RBP1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 CLEC19AQ6UXS0 136 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 Q6ZQT7 251 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 GOLT1AQ6ZVE7 132 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 FA2HQ7L5A8 372 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 SPATA12Q7Z6I5 190 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 NIT1Q86X76 327 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 FAM223AQ8IWN6 122 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 Q8N2B8 174 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 NUP35Q8NFH5 326 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms