RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 MIFP14174 115 aa13.32□□□□□ -0.28
CIRBP-202ENST00000413636 FCER1GP30273 86 aa13.32□□□□□ -0.28
CIRBP-202ENST00000413636 LAGE3Q14657 143 aa13.32□□□□□ -0.28
CIRBP-202ENST00000413636 FAM74A4Q5TZK3 123 aa13.32□□□□□ -0.28
CIRBP-202ENST00000413636 SUMO4Q6EEV6 95 aa13.32□□□□□ -0.28
CIRBP-202ENST00000413636 CDPF1Q6NVV7 123 aa13.32□□□□□ -0.28
CIRBP-202ENST00000413636 Q8NAQ8 132 aa13.32□□□□□ -0.28
CIRBP-202ENST00000413636 IGHV4-28A0A0C4DH34 117 aa13.31□□□□□ -0.28
CIRBP-202ENST00000413636 ZNF56Q15929 161 aa13.31□□□□□ -0.28
CIRBP-202ENST00000413636 EDA2RQ9HAV5 297 aa13.31□□□□□ -0.28
CIRBP-202ENST00000413636 ST20Q9HBF5 79 aa13.31□□□□□ -0.28
CIRBP-202ENST00000413636 PRKDCP78527 4128 aaKnown RBP13.31□□□□□ -0.28
CIRBP-202ENST00000413636 H7C1H1 209 aa13.31□□□□□ -0.28
CIRBP-202ENST00000413636 DEFB4AO15263 64 aa13.31□□□□□ -0.28
CIRBP-202ENST00000413636 RNASE8Q8TDE3 154 aaKnown RBP13.31□□□□□ -0.28
CIRBP-202ENST00000413636 A0A096LNJ9 63 aa13.3□□□□□ -0.28
CIRBP-202ENST00000413636 TRBV6-5A0A0K0K1A5 114 aa13.3□□□□□ -0.28
CIRBP-202ENST00000413636 C20orf202A1L168 122 aa13.3□□□□□ -0.28
CIRBP-202ENST00000413636 SYS1-DBNDD2H3BUS1 97 aa13.3□□□□□ -0.28
CIRBP-202ENST00000413636 RHODO00212 210 aa13.3□□□□□ -0.28
CIRBP-202ENST00000413636 ORMDL2Q53FV1 153 aa13.3□□□□□ -0.28
CIRBP-202ENST00000413636 PET117Q6UWS5 81 aa13.3□□□□□ -0.28
CIRBP-202ENST00000413636 TEX43Q6ZNM6 134 aa13.3□□□□□ -0.28
CIRBP-202ENST00000413636 IL17DQ8TAD2 202 aa13.3□□□□□ -0.28
CIRBP-202ENST00000413636 RPL39LQ96EH5 51 aaKnown RBP13.3□□□□□ -0.28
CIRBP-202ENST00000413636 C16orf74Q96GX8 76 aa13.3□□□□□ -0.28
CIRBP-202ENST00000413636 EMP1P54849 157 aa13.29□□□□□ -0.28
CIRBP-202ENST00000413636 Q8N976 141 aa13.29□□□□□ -0.28
CIRBP-202ENST00000413636 M0QY20 66 aa13.28□□□□□ -0.28
CIRBP-202ENST00000413636 G0S2P27469 103 aa13.28□□□□□ -0.28
CIRBP-202ENST00000413636 LGALS9BQ3B8N2 356 aa13.28□□□□□ -0.28
CIRBP-202ENST00000413636 SPATA12Q7Z6I5 190 aa13.28□□□□□ -0.28
CIRBP-202ENST00000413636 TENM3Q9P273 2699 aa13.28□□□□□ -0.28
CIRBP-202ENST00000413636 PLAC8L1A1L4L8 177 aa13.28□□□□□ -0.28
CIRBP-202ENST00000413636 PCP4L1A6NKN8 68 aa13.28□□□□□ -0.28
CIRBP-202ENST00000413636 VCYO14598 125 aa13.28□□□□□ -0.28
CIRBP-202ENST00000413636 PKIAP61925 76 aa13.28□□□□□ -0.28
CIRBP-202ENST00000413636 DAZ2Q13117 558 aaKnown RBP13.28□□□□□ -0.28
CIRBP-202ENST00000413636 TSTD3H0UI37 97 aa13.27□□□□□ -0.29
CIRBP-202ENST00000413636 RS1O15537 224 aa13.27□□□□□ -0.29
CIRBP-202ENST00000413636 POLR2KP53803 58 aaKnown RBP13.27□□□□□ -0.29
CIRBP-202ENST00000413636 CFAP126Q5VTH2 177 aa13.27□□□□□ -0.29
CIRBP-202ENST00000413636 ZFP2Q6ZN57 461 aa13.27□□□□□ -0.29
CIRBP-202ENST00000413636 NACAE9PAV3 2078 aa13.26□□□□□ -0.29
CIRBP-202ENST00000413636 A0A0J9YWU9 116 aa13.26□□□□□ -0.29
CIRBP-202ENST00000413636 LINC01549A6NIU2 74 aa13.26□□□□□ -0.29
CIRBP-202ENST00000413636 UFSP1Q6NVU6 142 aa13.26□□□□□ -0.29
CIRBP-202ENST00000413636 LINC00173Q6ZV60 143 aa13.26□□□□□ -0.29
CIRBP-202ENST00000413636 TCAPO15273 167 aa13.25□□□□□ -0.29
CIRBP-202ENST00000413636 KIR2DL4Q99706 377 aa13.25□□□□□ -0.29
CIRBP-202ENST00000413636 C11orf68Q9H3H3 251 aaKnown RBP13.25□□□□□ -0.29
CIRBP-202ENST00000413636 DNAH9Q9NYC9 4486 aa13.25□□□□□ -0.29
CIRBP-202ENST00000413636 NUDT3O95989 172 aa13.24□□□□□ -0.29
CIRBP-202ENST00000413636 ZNF664Q8N3J9 261 aa13.24□□□□□ -0.29
CIRBP-202ENST00000413636 IFI27L1Q96BM0 104 aa13.24□□□□□ -0.29
CIRBP-202ENST00000413636 VAMP8Q9BV40 100 aa13.24□□□□□ -0.29
CIRBP-202ENST00000413636 MRPL16Q9NX20 251 aaKnown RBP13.24□□□□□ -0.29
CIRBP-202ENST00000413636 TRBV27A0A0K0K1C4 114 aa13.24□□□□□ -0.29
CIRBP-202ENST00000413636 SDHAF1A6NFY7 115 aa13.24□□□□□ -0.29
CIRBP-202ENST00000413636 ATP5LO75964 103 aa13.24□□□□□ -0.29
CIRBP-202ENST00000413636 NOP10Q9NPE3 64 aaKnown RBP13.24□□□□□ -0.29
CIRBP-202ENST00000413636 HUWE1Q7Z6Z7 4374 aaKnown RBP13.23□□□□□ -0.29
CIRBP-202ENST00000413636 TRGV1A0A0A0MS02 117 aa13.23□□□□□ -0.29
CIRBP-202ENST00000413636 CIDEAO60543 219 aa13.23□□□□□ -0.29
CIRBP-202ENST00000413636 FAM222AQ5U5X8 452 aa13.22□□□□□ -0.29
CIRBP-202ENST00000413636 LINC01545Q5VT33 79 aa13.22□□□□□ -0.29
CIRBP-202ENST00000413636 IGHV3-53P01767 116 aa13.21□□□□□ -0.29
CIRBP-202ENST00000413636 OR4C5Q8NGB2 326 aa13.21□□□□□ -0.29
CIRBP-202ENST00000413636 DNAJC30Q96LL9 226 aa13.21□□□□□ -0.29
CIRBP-202ENST00000413636 CELA1Q9UNI1 258 aa13.21□□□□□ -0.29
CIRBP-202ENST00000413636 TRAV4A0A0B4J268 109 aa13.21□□□□□ -0.3
CIRBP-202ENST00000413636 DKK2Q9UBU2 259 aa13.21□□□□□ -0.3
CIRBP-202ENST00000413636 IGHV3-73A0A0B4J1V6 119 aa13.2□□□□□ -0.3
CIRBP-202ENST00000413636 LGALS9CQ6DKI2 356 aa13.2□□□□□ -0.3
CIRBP-202ENST00000413636 TOMM6Q96B49 74 aa13.2□□□□□ -0.3
CIRBP-202ENST00000413636 TNFRSF18Q9Y5U5 241 aa13.2□□□□□ -0.3
CIRBP-202ENST00000413636 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
CIRBP-202ENST00000413636 I3L3M4 83 aa13.19□□□□□ -0.3
CIRBP-202ENST00000413636 SPART-AS1P0CW21 52 aa13.19□□□□□ -0.3
CIRBP-202ENST00000413636 TRAV9-2A0A087WT02 112 aa13.18□□□□□ -0.3
CIRBP-202ENST00000413636 LYRM9A8MSI8 78 aa13.18□□□□□ -0.3
CIRBP-202ENST00000413636 RHOHQ15669 191 aa13.18□□□□□ -0.3
CIRBP-202ENST00000413636 Q6ZTI0 123 aa13.18□□□□□ -0.3
CIRBP-202ENST00000413636 PRO1933Q9H354 126 aa13.18□□□□□ -0.3
CIRBP-202ENST00000413636 H0Y8G0 127 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 C18orf15Q96N68 181 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 PAM16Q9Y3D7 125 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 TEX48A0A1B0GUV7 120 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 GAGE12BA1L429 117 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.17□□□□□ -0.3
CIRBP-202ENST00000413636 GAGE7O76087 117 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 GAGE12FP0CL80 117 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 GAGE12GP0CL81 117 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 GAGE12IP0CL82 117 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 DEFB130BP0DP73 79 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 DEFB130AP0DP74 79 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 C2orf66Q6UXQ4 117 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 CYSLTR1Q9Y271 337 aa13.17□□□□□ -0.3
CIRBP-202ENST00000413636 PRSS1P07477 247 aa13.16□□□□□ -0.3
CIRBP-202ENST00000413636 SPATA45Q537H7 98 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms