RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 UBE2D2P62837 147 aa5.25□□□□□ -1.57
CPSF4-202ENST00000412686 C15orf54Q8N8G6 183 aa5.25□□□□□ -1.57
CPSF4-202ENST00000412686 GTSF1LQ9H1H1 148 aa5.25□□□□□ -1.57
CPSF4-202ENST00000412686 DPH3P1Q9H4G8 78 aa5.25□□□□□ -1.57
CPSF4-202ENST00000412686 TNFRSF18Q9Y5U5 241 aa5.25□□□□□ -1.57
CPSF4-202ENST00000412686 TRBV7-3A0A075B6L6 115 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 TRAV26-2A0A0B4J265 109 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 TRBV10-1A0A0K0K1A3 114 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 M0QY20 66 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 TIRAPP58753 221 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 RPL36AP83881 106 aaKnown RBP5.24□□□□□ -1.57
CPSF4-202ENST00000412686 OR10J3Q5JRS4 329 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 LELP1Q5T871 98 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 WDR73Q6P4I2 378 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 SH2D6Q7Z4S9 175 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 COMMD7Q86VX2 200 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 NUP35Q8NFH5 326 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 DEFB104AQ8WTQ1 72 aa5.24□□□□□ -1.57
CPSF4-202ENST00000412686 RPL36ALQ969Q0 106 aaKnown RBP5.24□□□□□ -1.57
CPSF4-202ENST00000412686 DNAH17Q9UFH2 4485 aa5.23□□□□□ -1.57
CPSF4-202ENST00000412686 GAS8-AS1O95177 125 aa5.23□□□□□ -1.57
CPSF4-202ENST00000412686 IGHV3-30P01768 117 aa5.23□□□□□ -1.57
CPSF4-202ENST00000412686 IGHV3-33P01772 117 aa5.23□□□□□ -1.57
CPSF4-202ENST00000412686 DNAH10OSP0CZ25 163 aa5.23□□□□□ -1.57
CPSF4-202ENST00000412686 IGHV3-30-3P0DP02 117 aa5.23□□□□□ -1.57
CPSF4-202ENST00000412686 IGHV3-30-5P0DP03 117 aa5.23□□□□□ -1.57
CPSF4-202ENST00000412686 C1orf134Q5TEV5 83 aa5.23□□□□□ -1.57
CPSF4-202ENST00000412686 C6orf223Q8N319 242 aa5.23□□□□□ -1.57
CPSF4-202ENST00000412686 RPL39LQ96EH5 51 aaKnown RBP5.23□□□□□ -1.57
CPSF4-202ENST00000412686 GFRA4Q9GZZ7 299 aa5.23□□□□□ -1.57
CPSF4-202ENST00000412686 EPPK1P58107 5090 aaKnown RBP5.23□□□□□ -1.57
CPSF4-202ENST00000412686 TRAV8-6A0A0B4J262 113 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 A0A1B0GUT8 65 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 SMIM27A0A1W2PRY6 76 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 TMEM218A2RU14 115 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 PRSS29PA6NIE9 313 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 TTC32Q5I0X7 151 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 RASL11AQ6T310 242 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 NTM-AS1Q6ZSK4 140 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 AMN1Q8IY45 258 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 GATD1Q8NB37 220 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 BORCS7Q96B45 105 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 RNF185Q96GF1 192 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 NAT8BQ9UHF3 227 aa5.22□□□□□ -1.57
CPSF4-202ENST00000412686 LINC00862A6NCI5 91 aa5.21□□□□□ -1.58
CPSF4-202ENST00000412686 FAM231BA6NCW3 169 aa5.21□□□□□ -1.58
CPSF4-202ENST00000412686 F8W036 122 aa5.21□□□□□ -1.58
CPSF4-202ENST00000412686 LINC01556Q5JQF7 62 aa5.21□□□□□ -1.58
CPSF4-202ENST00000412686 MRPL54Q6P161 138 aaKnown RBP5.21□□□□□ -1.58
CPSF4-202ENST00000412686 UQCC3Q6UW78 93 aa5.21□□□□□ -1.58
CPSF4-202ENST00000412686 FAT2Q9NYQ8 4349 aa5.21□□□□□ -1.58
CPSF4-202ENST00000412686 A0A1B0GVY2 172 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 SMKR1H3BMG3 65 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 H7C1H1 209 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 NCR2O95944 276 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 RAB4AP20338 218 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 RPS10P46783 165 aaKnown RBP5.2□□□□□ -1.58
CPSF4-202ENST00000412686 CAMPP49913 170 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 PNRC1Q12796 327 aaPredicted RBP5.2□□□□□ -1.58
CPSF4-202ENST00000412686 RIGQ13278 110 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 Q6ZRN7 208 aaPredicted RBP5.2□□□□□ -1.58
CPSF4-202ENST00000412686 LINC00336Q6ZUF6 198 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 SMIM15Q7Z3B0 74 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 DAZ4Q86SG3 579 aaKnown RBP5.2□□□□□ -1.58
CPSF4-202ENST00000412686 DNAJC30Q96LL9 226 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 TMEM191AQ9H0A3 160 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 NIT2Q9NQR4 276 aa5.2□□□□□ -1.58
CPSF4-202ENST00000412686 DAZ3Q9NR90 486 aaKnown RBP5.2□□□□□ -1.58
CPSF4-202ENST00000412686 A0A087WWC5 75 aa5.19□□□□□ -1.58
CPSF4-202ENST00000412686 TRBV6-8A0A0A6YYG3 113 aa5.19□□□□□ -1.58
CPSF4-202ENST00000412686 A0A1B0GXF2 115 aa5.19□□□□□ -1.58
CPSF4-202ENST00000412686 NIT1Q86X76 327 aa5.19□□□□□ -1.58
CPSF4-202ENST00000412686 Q9HAA7 133 aa5.19□□□□□ -1.58
CPSF4-202ENST00000412686 TRAV9-2A0A087WT02 112 aa5.18□□□□□ -1.58
CPSF4-202ENST00000412686 IBA57-AS1B1ANH7 110 aa5.18□□□□□ -1.58
CPSF4-202ENST00000412686 PPP1R2P9O14990 202 aa5.18□□□□□ -1.58
CPSF4-202ENST00000412686 MT-ND4LP03901 98 aa5.18□□□□□ -1.58
CPSF4-202ENST00000412686 GAGE6Q13070 117 aa5.18□□□□□ -1.58
CPSF4-202ENST00000412686 MPV17L2Q567V2 206 aa5.18□□□□□ -1.58
CPSF4-202ENST00000412686 Q8N976 141 aa5.18□□□□□ -1.58
CPSF4-202ENST00000412686 ANAPC16Q96DE5 110 aa5.18□□□□□ -1.58
CPSF4-202ENST00000412686 SEC11CQ9BY50 192 aa5.18□□□□□ -1.58
CPSF4-202ENST00000412686 TRBV25-1A0A075B6N4 114 aa5.17□□□□□ -1.58
CPSF4-202ENST00000412686 TMEM262E9PQX1 116 aa5.17□□□□□ -1.58
CPSF4-202ENST00000412686 FUSP35637 526 aaKnown RBP eCLIP5.17□□□□□ -1.58
CPSF4-202ENST00000412686 HBBP68871 147 aa5.17□□□□□ -1.58
CPSF4-202ENST00000412686 MRPL51Q4U2R6 128 aaKnown RBP5.17□□□□□ -1.58
CPSF4-202ENST00000412686 C10orf91Q5T1B1 145 aa5.17□□□□□ -1.58
CPSF4-202ENST00000412686 FAM104BQ5XKR9 115 aa5.17□□□□□ -1.58
CPSF4-202ENST00000412686 ATRAIDQ6UW56 229 aa5.17□□□□□ -1.58
CPSF4-202ENST00000412686 C10orf126Q8N4M7 172 aa5.17□□□□□ -1.58
CPSF4-202ENST00000412686 CHCHD5Q9BSY4 110 aa5.17□□□□□ -1.58
CPSF4-202ENST00000412686 KLK12Q9UKR0 248 aa5.17□□□□□ -1.58
CPSF4-202ENST00000412686 FRAS1Q86XX4 4008 aa5.17□□□□□ -1.58
CPSF4-202ENST00000412686 DNAH11Q96DT5 4516 aa5.16□□□□□ -1.58
CPSF4-202ENST00000412686 A0A087WX48 190 aa5.16□□□□□ -1.58
CPSF4-202ENST00000412686 IGHV1-24A0A0C4DH33 117 aa5.16□□□□□ -1.58
CPSF4-202ENST00000412686 TRBV6-5A0A0K0K1A5 114 aa5.16□□□□□ -1.58
CPSF4-202ENST00000412686 SDHAF1A6NFY7 115 aa5.16□□□□□ -1.58
CPSF4-202ENST00000412686 AMTP48728 403 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms